Probe carrier, method of manufacturing the same and apparatus to be used for the method

• US 20020147330A1
• Filed: 03/27/2002
• Published: 10/10/2002
• Est. Priority Date: 03/28/2001
• Status: Abandoned Application

• Current Assignee: Canon Kabushiki Kaisha (Canon Inc.)
• Original Assignee: Canon Kabushiki Kaisha (Canon Inc.)
• Inventors: Yoshii, Hiroto, Yamamoto, Nobuko, Mihashi, Naoto
• Application Number:
  US10/106,460
• Publication Number:
  US 20020147330A1
• Time in Patent Office: Days
• US Class Current: 536/24.32
• CPC Class Codes: G01N 2035/00019 cassette structures
• CPC Class Codes: G01N 33/48764 Test tape taken off a spool
• CPC Class Codes: G01N 35/00009 provided with a sample supporting tape, e.g. with absorbent zones

Abstract

A probe carrier of a DNA array or the like is formed by arranging regions fixing different probes in the axial direction of a substrate having an oblong profile which is string-shaped, tape-shaped, string-shaped, tube-shaped or rod-shaped. With this arrangement, the efficiency of manufacturing a probe carrier and handling it in different steps of specimen analysis is improved.

Claims

1. A probe carrier having on an elongate substrate a plurality regions fixing different probes each adapted to be bonded specifically to a target substance, said regions fixing probes being arranged longitudinally on said substrate.

2. A probe carrier according to claim 1, wherein

said substrate is string-shaped, tape-shaped, string-shaped, tube-shaped or rod-shaped.

3. A probe carrier according to claim 1, wherein

said target substance is a nucleic acid and said probe is a single stranded nucleic acid having a base sequence complementary to all or part of the base sequence of the target nucleic acid and adapted to be specifically hybridized with the target nucleic acid.

4. A probe carrier roll formed by winding on a core a probe carrier having on an elongate substrate a plurality regions fixing different probes each adapted to be bonded specifically to a target substance, said regions fixing probes being arranged longitudinally on said substrate.

5. A cassette for detecting a target substance by means of probes adapted to be bonded specifically to the target substance, said cassette comprising in a cabinet:

a probe carrier roll containing section containing a probe carrier roll formed by winding on a feed reel a probe carrier having on an elongate substrate a plurality regions fixing different probes each adapted to be bonded specifically to a target substance, said regions fixing probes being arranged longitudinally on said substrate;

a take-up reel for taking up the probe carrier fed out from the feed reel; and

an opening arranged on the moving path of the probe carrier from said probe carrier roll containing section to said take-up reel.

6. A method for detecting a target substance in a specimen by means of probes adapted to be bonded specifically to the target substance, said method comprising:

a step of causing a probe carrier having regions fixing different probes to contact with the specimen, the regions being arranged in the longitudinal direction of an elongate substrate; and

a step of detecting presence or absence of a reaction of the target substance with the probe of each of the regions fixing probes caused to contact with the specimen.

7. A method according to claim 6, wherein

the reaction of the target substance with the probes is taken out as a signal detectable by a detection means and the signal is read by moving the regions fixing probes brought into contact with the specimen relative to the detection means.

8. A method according to claim 6, wherein

said probe carrier is brought into contact with the specimen by moving a liquid-ejecting apparatus for applying the specimen relative to the probe carrier in the longitudinal direction of the latter and applying a solution of the specimen to each of the regions fixing probes from the liquid-ejecting apparatus.

9. A method according to claim 8, wherein

said probe carrier is supplied in the form of a roll wound on a core and the probe carrier fed from the roll is brought into contact with the solution of the specimen.

10. A method according to claim 9, wherein

said probe carrier is supplied in the form of a cassette having in a cabinet a probe carrier roll containing section containing a probe carrier roll formed by winding the probe carrier on a feed reel, a take-up reel for taking up the probe carrier fed from the feed reel and a specimen applying opening arranged on the moving path of the probe carrier extending between the probe carrier roll containing section and the take-up reel, and the solution of said specimen is applied to each region fixing a probe by way of the specimen applying opening.

11. A method according to claim 6, wherein

said substrate is string-shaped, tape-shaped, string-shaped, tube-shaped or rod-shaped.

13. An apparatus according to claim 12, wherein

said moving means is adapted to sequentially move the sample for observation relative to said detecting means from the leading end toward the rear end thereof.

14. An apparatus according to claim 13, further comprising:

a roll containing section containing a roll formed by winding the sample for observation on a feed reel, a take-up reel for taking up the sample for observation as fed out from the feed reel, a take-up reel drive means and a detecting section including said detecting means and arranged on the moving path of the sample for observation extending between the roll containing section and the take-up reel.

15. An apparatus according to claim 14 further comprising:

a cassette receiving section for receiving a cassette having in a cabinet a roll containing section for containing a roll formed by winding the sample for observation around a feed reel, a take-up reel for taking up the sample for observation as fed out from the feed reel and an opening arranged on the moving path of the sample for observation extending between the roll containing section and the take-up reel, a take-up reel drive means for driving the take-up reel of the cassette received in the cassette receiving section and an aligning means for aligning said detecting means at a position adapted to detect by way of the opening the signal from the regions fixing probes of the sample for observation moving along the moving path as driven by said drive means.

16. An apparatus according to claim 12, wherein

said substrate is string-shaped, tape-shaped, string-shaped, tube-shaped or rod-shaped.

18. A method according to claim 17, wherein

the reaction of the target substance and the probes is detected by a detecting means as a detectable signal and the signal is read by moving the regions fixing probes held in contact with the specimen relative to the signal detecting means.

19. A method according to claim 17, wherein

said probe carrier is brought into contact with the specimen by moving a liquid-ejecting apparatus for applying the specimen relative to the probe carrier in the longitudinal direction thereof and applying the liquid of said specimen to each of the regions fixing probes from the liquid-ejecting apparatus.

20. A method according to claim 17, wherein

said probe carrier is supplied as a roll formed by winding the probe carrier around a core and the probe carrier is brought into contact with the solution of said specimen as it is fed out from the roll.

21. A method according to claim 20, wherein

said probe carrier is supplied as a cassette having in a cabinet a probe carrier roll containing section for containing a roll formed by winding the probe carrier around a feed reel, a take-up reel for taking up the probe carrier as fed out from the feed reel and a specimen applying opening arranged on the moving path of the probe carrier extending between the roll containing section and the take-up reel and the solution of said specimen is applied to each of the regions fixing probes by utilizing the specimen applying opening.

22. A method according to claim 21, wherein

said cassette has an opening to be used for detecting the signal on the moving path of the probe carrier between said specimen applying opening and said take-up reel and the signal is detected by using said opening.

23. A method according to claim 17, wherein

said substrate is string-shaped, tape-shaped, string-shaped, tube-shaped or rod-shaped.

25. An apparatus according to claim 24, wherein

said second moving means is adapted to sequentially move the sample for observation relative to said detecting means from the leading end toward the rear end thereof.

26. An apparatus according to claim 24, further comprising:

a roll containing section containing a roll formed by winding the substrate around a feed reel, a take-up reel for taking up the substrate as fed out from the feed reel, a take-up reel drive means and a guide mechanism adapted to sequentially move said probe carrier preparing section, said specimen preparing section and said detecting section by the operation of taking up the substrate fed out from the containing section by means of the take-up reel.

27. An apparatus according to claim 24, wherein

said substrate is string-shaped, tape-shaped, string-shaped, tube-shaped or rod-shaped.

29. A method according to claim 28, wherein

said substrate is supplied as a roll formed by winding the substrate around a reel and said different probe solutions are applied to the substrate by moving the application means relative to the substrate fed out from the roll.

30. A method according to claim 29, wherein

said roll is formed by winding a probe carrier formed by fixing the probes onto the substrate around a feed reel.

31. A method according to claim 28, wherein

said means for applying probe solutions has nozzles for ejecting the respective solutions and the solutions are ejected from the nozzles by heat applied form a thermal energy generator.

12. A target substance detecting apparatus for detecting presence or absence of a reaction of probes with a target substance in a specimen by detecting a signal generated by the reaction, the probes being adapted to be bonded specifically to the target substance, said apparatus comprising:

a signal detecting means; and

a moving means for longitudinally moving a sample for observation relative to said detecting means, said sample for observation being obtained by causing the specimen to contact with a probe carrier having regions fixing different probes, said regions being arranged in the longitudinal direction of an elongate substrate.

17. A method for detecting a target substance in a specimen by means of probes adapted to be bonded specifically to the target substance, said method comprising:

(1) a step of preparing a probe carrier by arranging regions fixing different probes in the longitudinal direction of an elongate substrate;

(2) a step of obtaining a sample for observation by causing the probe carrier to contact with the specimen; and

(3) a step of detecting presence or absence of a reaction of the target substance with the probe in each of the regions fixing probes in the sample for observation.

24. A detection apparatus for detecting a reaction of probes adapted to be bonded specifically to a target substance with the target substance in a specimen by detecting presence or absence of a signal generated by the reaction, said apparatus comprising:

a probe carrier preparing section for preparing a probe carrier carrying probes fixed thereto on an elongate substrate;

a sample preparing section for preparing a sample for observation by causing the probe carrier prepared by said probe carrier preparing section to contact with a specimen; and

a detecting section for detecting a signal generated by the reaction of the probes with a target substance in the sample for observation as prepared by said sample preparing section;

said probe carrier preparing section having;

a means for applying solutions of the probes;

a means for holding the substrate; and

a first moving means for moving said solution applying means longitudinally relative to the substrate;

said detecting section having;

a means for detecting a signal; and

a second moving means for moving said signal detecting means relative to the sample for observation as prepared by causing the probe carrier having regions fixing different probes to contact with the specimen, said regions being arranged in the longitudinal direction of the substrate.

28. A method for manufacturing a probe carrier having regions for fixing different probes adapted to be bonded specifically to a target substance, said regions being arranged in the longitudinal direction of an elongate substrate, said method comprising:

a step of moving a means for applying probe solutions relative to said substrate from the front end to the rear end thereof so as to apply different probe solutions as a function of the arrangement of said regions; and

a step of fixing the probes in said regions carrying the respective probe solutions applied thereto to said substrate.

32. A probe carrier manufacturing apparatus for 4 manufacturing a probe carrier having regions fixing different probes adapted to be bonded specifically to a target substance, said regions being arranged in the longitudinal direction of an elongate substrate, said apparatus comprising:

a means for applying probe solutions; and

a means for relatively moving said solution applying means from the front end to the rear end of the long substrate.

33. An apparatus according to claim 32, further comprising

a roll containing section for containing a roll formed by winding the substrate around a feed reel and said solution applying means is moved relative to the substrate fed out from the roll by said moving means.

34. An apparatus according to claim 33, further comprising:

a cutting means for cutting the probe carrier formed by fixing the probes onto the substrate into pieces having a predetermined length.

35. An apparatus according to claim 34, further comprising:

a take-up reel for taking up the probe carrier formed by fixing the probes onto the substrate and collecting it and a take-up reel drive means.

40. A method according to claim 39, wherein

the reaction of the target substance and the probes is detected by a detecting means as a detectable signal and the signal is read by moving the regions fixing probes held in contact with the specimen relative to the signal detecting means.

36. A probe carrier comprising:

a plurality of regions fixing probes arranged axially in the inside of a tubular member, said regions carrying different probes fixed thereto.

37. A method for detecting a target substance in a specimen by means of probes adapted to be bonded specifically to a target substance, said method comprising:

a step of flowing a solution containing a specimen from one of two openings of a tubular member as a probe carrier to the other opening, a plurality of regions fixing probes being arranged axially in the inside of the tubular member, said regions carrying different probes fixed thereto; and

a step of detecting presence or absence of a reaction of the target substance with the probe of each of said regions fixing probes caused to contact with the specimen.

38. A method of manufacturing a probe carrier having a plurality of regions fixing probes adapted to be bonded specifically to a target substance, said regions being arranged axially in the inside of a tubular member, said regions carrying different probes fixed thereto, said method comprising:

a step of causing solutions of a plurality of probes necessary for forming and arranging the regions to adhere to a plate-shaped member according to the arrangement of the regions;

a step of solidifying the probes in the regions carrying the probes adhered thereto on the plateshaped member; and

a step of molding the plate-shaped member carrying the solidified probes adhered thereto into a tubular member so as to make the regions fixing probes to be arranged in the axial direction on the inner wall of the tubular member.

39. A method for detecting a target substance in a specimen by means of probes adapted to be bonded specifically to a target substance, said method comprising:

a step of flowing a solution containing the specimen into the inside of a tubular member having regions fixing probes arranged in the axial direction in the inside thereof and causing the solution to contact with each of the regions fixing probes to obtain a sample for observation; and

a step of detecting presence or absence of a reaction of the target substance with the probe of each of the regions fixing probes in the sample for observation.