Detection of abused substances and their metabolites using nucleic acid sensor molecules

• US 20030224435A1
• Filed: 05/16/2003
• Published: 12/04/2003
• Est. Priority Date: 05/16/2002
• Status: Abandoned Application

• Current Assignee: Sirna Therapeutics, Inc. (Alnylam Pharmaceuticals Incorporated)
• Original Assignee: Sirna Therapeutics, Inc. (Alnylam Pharmaceuticals Incorporated)
• Inventors: Seiwert, Scott
• Application Number:
  US10/439,715
• Publication Number:
  US 20030224435A1
• Time in Patent Office: Days
• US Class Current: 435/6
• CPC Class Codes: C12N 15/115 Aptamers, i.e. nucleic acids binding a target molecule specifically and with high affinity without hybridising therewith ; Nucleic acids binding to non-nucleic acids, e.g. aptamers
• CPC Class Codes: C12N 2310/121 Hammerhead
• CPC Class Codes: C12N 2310/16 Aptamers
• CPC Class Codes: C12N 2310/3519 Fusion with another nucleic acid
• CPC Class Codes: G01N 33/94 involving narcotics or drugs or pharmaceuticals, neurotransmitters or associated receptors

Abstract

Nucleic acid sensor molecules (allozymes, allosteric ribozymes, allosteric DNAzymes), aptamers and methods are provided for the detection and quantitation of small molecules, including drugs, drug analogs, and drug metabolites, for example recreational drugs, mood-altering drugs, and performance enhancing drugs such as 4-MTA (4-methylthioamphetamine), Alpha-ethyltryptamine, Amphetamine, Amyl nitrite, Benzocaine, Cocaine, Dimethyltryptamine, Ecstasy (MDA, MDMA, MDEA), Ephedrine, Erythropoietine (Epogen), Fentanyl, Gamma Hydroxybutyrate (GHB), GBL (Gamma butyrolactone), GHB (Gamma Hydroxybutyrate), Hashish, Heroin, Isobutyl nitrite, Ketamine, Lidocaine, LSD (Lysergic acid diethylamide), Mannitol, Marijuana (THC), Mescaline, Methadone, Methamphetamine, Methaqualone, Methcathinone, Methylphenidate (ritalin), Morphine, Nexus (2CB), Nicotine, Opium, Oxycodone, OxyContin, PCP (phencyclidine), Peyote, Phenobarbital, Procaine, Psilocybin, Psilocybin/psilocin, Pseudoephedrine, Rohypnol, Scopolamine, Steroids, Strychnine, and Talwin. Also provided are kits for detection. The nucleic acid sensor molecules, methods and kits provided herein can be used in diagnositic applications for detecting drugs, analogs, and metabolites thereof.

Claims

1. A method of detecting the presence of a compound in a biological sample, the method comprising:

(a) contacting the sample with an nucleic acid sensor molecule, and (b) assaying for the presence of the drug under conditions suitable for detecting the presence of the drug in the sample, wherein the nucleic acid sensor molecule comprises a enzymatic nucleic acid component and one or more sensor components that upon interaction with the compound induces a chemical reaction of the enzymatic nucleic acid component that modulates the activity or properties of the reporter molecule, signaling the presence of the compound.

2. The method according to claim 1 wherein the sensor component or components have a greater interaction affinity for the compound as compared to other compounds in the biological sample.

3. The method according to claim 1 wherein the compound is a drug.

4. The method according to claim 3 wherein the drug is ecstasy.