Array assay devices and methods of using the same

• US 20030235518A1
• Filed: 06/21/2002
• Published: 12/25/2003
• Est. Priority Date: 06/21/2002
• Status: Abandoned Application

• Current Assignee: Agilent Technologies, Inc.
• Original Assignee: Agilent Technologies, Inc.
• Inventors: Shea, Laurence R., Summers, Douglas G., Hilson, Richard O.
• Application Number:
  US10/177,376
• Publication Number:
  US 20030235518A1
• Time in Patent Office: Days
• US Class Current: 506/33
• CPC Class Codes: B01J 19/0046 Sequential or parallel reactions, e.g. for the synthesis of polypeptides or polynucleotides; Apparatus and devices for combinatorial chemistry or for making molecular arrays synthesis methods per se C40B50/00
• CPC Class Codes: B01J 2219/00596 Solid-phase processes
• CPC Class Codes: B01J 2219/00605 the compounds being directly bound or immobilised to solid supports
• CPC Class Codes: B01J 2219/0061 The surface being organic
• CPC Class Codes: B01J 2219/00612 the surface being inorganic
• CPC Class Codes: B01J 2219/00626 Covalent
• CPC Class Codes: B01J 2219/00637 by coating it with another layer
• CPC Class Codes: B01J 2219/00641 the porous medium being continuous, e.g. porous oxide substrates
• CPC Class Codes: B01J 2219/00659 Two-dimensional arrays
• CPC Class Codes: B01J 2219/00722 Nucleotides
• CPC Class Codes: B01J 2219/00725 Peptides
• CPC Class Codes: B01L 2300/0636 Integrated biosensor, microarrays
• CPC Class Codes: B01L 2300/0822 Slides
• CPC Class Codes: B01L 2300/0877 Flow chambers
• CPC Class Codes: B01L 3/508 rigid containers not provided for above
• CPC Class Codes: B01L 9/52 Supports specially adapted for flat sample carriers, e.g. for plates, slides, chips
• CPC Class Codes: C40B 40/06 Libraries containing nucleotides or polynucleotides, or derivatives thereof
• CPC Class Codes: C40B 40/10 Libraries containing peptides or polypeptides, or derivatives thereof
• CPC Class Codes: Y10T 436/25 including sample preparation

Abstract

Array assay devices and methods for using the same in array based assays are provided. The subject array assay devices are characterized by having a substrate having at least one array sealed between a rigid bottom surface and a cover, wherein the rigid bottom surface and the cover are sealed to each other by a frangible seal. The subject device may also include a sealing element for forming seals around a plurality of arrays to provide individual assay areas. The subject invention also includes methods for performing an array assay. In the subject methods, a subject array assay device is provided, a sample is contacted to the at least one array and an array assay is performed. The frangible seal may then be broken to expose the at least one array. The subject invention also includes kits which include the subject devices.

Claims

1. An array assay device, said device comprising:

a substrate comprising at least one array sealed between a rigid bottom surface and a cover, wherein said rigid bottom surface and said cover are sealed to each other by a frangible seal.

2. The array assay device according to claim 1, wherein said substrate serves as said rigid bottom surface such that said substrate and said cover are sealed to each other by a frangible seal.

3. The array assay device according to claim 1, wherein either said cover or said rigid bottom surface comprises at least one recess and said at least one recess produces at least one substantially vapor and fluid tight assay area around said at least one array.

4. The array assay device according to claim 3, wherein said at least one substantially vapor and fluid tight assay area provides an assay volume ranging from about 10 μ

l to about 1000 μ

l.

5. The array assay device according to claim 1, wherein said array assay device comprises at least one sealing element for producing at least one seal around said at least one array.

6. The array assay device according to claim 5, wherein said at least one seal is substantially vapor and fluid tight.

7. The array assay device according to claim 5, wherein said substrate comprises a plurality of arrays and said at least one sealing element produces a plurality of individual seals around each array.

8. The array assay device according to claim 7, wherein each of said individual seals is substantially vapor and fluid tight.

9. The array assay device according to claim 1, further comprising at least one access port.

10. The array assay device according to claim 1, wherein said frangible seal is produced by using at least one of:

thermal energy, ultrasonic energy, RF energy, and adhesive.

11. The array assay device according to claim 1, wherein said frangible seal is substantially vapor and fluid tight.

12. The array assay device according to claim 1, wherein said cover is flexible.

13. The array assay device according to claim 1, further comprising a substrate receiving frame.

14. The array assay device according to claim 13, wherein said substrate receiving frame is configured to be used with an array scanner, whereby an array may be scanned by said array scanner while said array is retained in said substrate receiving frame.

15. The array assay device according to claim 1, further comprising an array holder.

16. The array assay device according to claim 15, wherein said array holder is configured to be used with an array scanner, whereby an array may be scanned by said array scanner while said array is retained in said array holder.

38. A method for performing an array assay and reading a result of said array assay, said method comprising:

(a) performing an array assay using the array assay device of claim 1 comprising a substrate having at least on array retained in at least one of a substrate receiving frame and an array holder;

(b) removing said retained substrate having at least one array from said array assay device; and

(c) mounting said retained substrate having at least one array on an array scanner so that said retained substrate having at least one array may be read by said scanner while retained in said at least one of a substrate receiving frame and an array holder.

39. The method according to claim 38, further comprising reading said mounted at least one array.

40. A kit for performing an assay, said kit comprising:

(a) at least one array assay device according to claim 1;

and

(b) instructions for using said at least one array assay device.

17. An array assay device, said device comprising:

(a) a substrate comprising at least one array; and

(b) a cover, wherein said substrate and said cover are sealed to each other by a frangible seal.

18. A method for performing an array assay, said method comprising:

(a) providing an array assay device comprising;

a substrate comprising at least one array sealed between a rigid bottom surface and a cover, wherein said rigid bottom surface and said cover are sealed to each other by a frangible seal;

(b) contacting said at least one array with a sample; and

(c) performing an array assay.

19. The method according to claim 18, further comprising producing at least one assay area around said at least one array.

20. The method according to claim 19, wherein said at least one assay area is substantially vapor and fluid tight.

21. The method according to claim 19, wherein said substrate comprises a plurality of arrays and an individual assay area is produced around each array.

22. The method according to claim 18, wherein said device comprises at least one port and said sample is introduced through said port.

23. The method according to claim 18, further comprising mixing said sample in contact with said at least one array.

24. The method according to claim 18, further comprising breaking said frangible seal.

25. The method according to claim 24, wherein said cover is peeled back to break said frangible seal.

26. The method according to claim 18, further comprising retaining said substrate in at least one of a substrate receiving frame and an array holder.

27. The method according to claim 18, wherein said substrate serves as said rigid bottom surface such that said substrate and said cover are sealed to each other by said frangible seal.

28. A method comprising, following breaking said frangible seal according to claim 24, reading said at least one array to obtain a result.

29. The method according to claim 28, wherein said at least one array is read while positioned on said rigid bottom surface.

30. The method according to claim 28, wherein said at least one array is read while positioned in at least one of a substrate receiving frame and said array holder of claim 26.

31. A method comprising forwarding data representing a result of a reading obtained by the method of claim 28 from a first location to a second location.

32. The method according to claim 31, wherein said second location is remote from said first location.

33. A method comprising receiving data representing a result of a reading obtained by the method of claim 28.

34. A method of manufacturing an array assay device, said method comprising:

positioning a substrate having at least one array between a rigid bottom surface and a cover and frangibley sealing said rigid bottom surface and said cover to each other to seal said substrate having at least one array therebetween, whereby an array assay device is produced.

35. A method of manufacturing an array assay device, said method comprising:

frangibley sealing a substrate having at least one array to a cover, whereby an array assay device is produced.

36. A method for performing an array assay, said method comprising:

(a) receiving an array assay device of claim I comprising said substrate having at least one array pre-packaged therein from a remote site;

(b) performing an array assay using said received array assay device;

(c) removing said pre-packaged substrate from said array assay device; and

(d) reading said at least one array to obtain a result.

37. The method according to claim 36, wherein said pre-packaged substrate comprises a substrate retained in at least one of a substrate receiving frame and an array holder in said array assay device.