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Method, system and computer software for providing genomic ontological data

  • US 20040126840A1
  • Filed: 12/23/2002
  • Published: 07/01/2004
  • Est. Priority Date: 12/23/2002
  • Status: Abandoned Application
First Claim
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1. A genomic web portal for providing biological information constructed and arranged to execute a computer-implemented method for providing an ontological map having nodes and edges, wherein the method comprises the acts of:

  • correlating one or more probe-set identifiers associated with one or more probe sets of one or more probe arrays with a plurality of ontological categories or terms,.thereby generating probe-set identifier association data;

    correlating the probe-set identifier association data with graph traversal data including associations among the nodes and edges; and

    displaying the ontological map based, at least in part, on the correlation of the probe-set identifier association data and the graph traversal data;

    wherein at least one of the probe arrays is constructed and arranged to detect or measure any one or any combination of biological, biochemical or genetic metrics including gene expression, genotype, SNP, haplotype, or targets including antibodies, cell membrane receptors, monoclonal antibodies and antisera reactive with specific antigenic determinants, drugs, oligonucleotides, nucleic acids, peptides, proteins, cofactors, lectins, sugars, polysaccharides, cells, cellular membranes, or organelles.

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