Determining the density of functional moieties on polymer reagents

• US 20040132092A1
• Filed: 01/03/2003
• Published: 07/08/2004
• Est. Priority Date: 01/03/2003
• Status: Abandoned Application

• Current Assignee: Bayer Corporation (Bayer AG)
• Original Assignee: Bayer Corporation (Bayer AG)
• Inventors: Stetson, Christopher M., Albarella, James P., Corey, Paul F.
• Application Number:
  US10/336,573
• Publication Number:
  US 20040132092A1
• Time in Patent Office: Days
• US Class Current: 435/7.1
• CPC Class Codes: G01N 31/22 using chemical indicators G01N31/02 takes precedence
• CPC Class Codes: G01N 33/543 with an insoluble carrier for immobilising immunochemicals
• CPC Class Codes: G01N 33/583 with non-fluorescent dye label

Abstract

The invention provides a method for determining the density of functional molecules attached to a substrate used for analysis of biological samples. A dye molecule responding to near infrared radiation at a wavelength of at least 600 nm is attached to the substrate and used to indicate the number of the functional molecules attached to the substrate by comparing the infrared absorption of the dye molecules with the ultraviolet absorption of the functional molecules. Such substrates may be employed in immunoassays and in vivo diagnostics.

Claims

1. A method of determining the density of functional moieties on polymer substrates comprising:

(a) attaching a dye molecule to a polymer substrate, said dye molecule absorbing infrared radiation at a wavelength of at least 600 nm;

(b) attaching a compound as a functional moiety to said polymer substrate with attached dye molecules, said compound being selected to react with an analyte in a biological sample;

(c) attaching the dye molecule selected in (a) as a label to a second sample of said polymer substrate and determining by their absorption of infrared radiation the number of dye molecules attached to said polymer substrate;

(d) determining the absorption of ultraviolet radiation by the functional moieties and by infrared radiation absorption of dye molecules in the polymer substrate of (b); and

(e) determining the number of functional moieties on said polymer substrate of (b) relative to the number of attached dye molecules determined in (c), said number of functional moieties representing the density of said functional molecules.

2. A method of claim 1 wherein said dye molecule has the formula:

3. A method of claim 1, wherein said dye molecule is DTO-108.

4. A method of claim 1 wherein said polymer substrate is a member of the group consisting of polyacrylic acid, polyamides, polypeptides, dextrans, polyesters, polyethylene glycols, polyamines, and co-polymers thereof.

5. A method of claim 4 wherein said polymer substrate is AECM Ficoll.

6. A method of claim 5 wherein said dye molecule is attached to said polymer substrate by reaction with amine functional groups on said AECM Ficoll.

7. A method of claim 6 wherein said functional compound is Cytochrome C.

8. A method of claim 7 wherein said Cytochrome C is attached to said polymer substrate by reaction with biscarbonyl imidazole terminated polyethylene glycol.

9. A method of claim 1 wherein said functional molecule as selected from the group consisting of haptens, epitopes, antibodies, antigens and immunoglobulins.

10. A method of carrying out immunoassays wherein a polymer substrate attached to a functional molecule and a dye molecule having the density of said functional molecules determined by the number of attached dye molecules is used as a reagent for determining analytes of interest in biological samples.

11. A method of claim 10 wherein said biological samples are opaque body fluids.

12. A method of claim 11 wherein said biological samples are blood, feces, and dark urine.

13. A method of carrying out in vivo diagnostics wherein a polymer substrate is used as a reagent for imaging of predetermined species of body cells, said polymer substrate being attached to a functional molecule and a dye molecule and the density of said functional molecules is determined by the number of attached dye molecules.

14. A method of claim 13 wherein said predetermined species of body cells are tumors or lesions.

15. An immunoassay wherein a functional moiety is attached to a polymer substrate and thereafter contacted with a biological sample for binding said functional moiety to an analyte, comprising:

(a) attaching a dye molecule to a polymer substrate, said dye molecule absorbing infrared radiation at a wavelength of at least 600 nm;

(b) attaching a functional moiety to said polymer substrate having an attached dye molecule of (a), said functional moiety being selected to react with an analyte in a biological sample;

(c) attaching the dye molecules of (a) as a label to a second sample of said polymer substrate and determining by their absorption of radiation the number of dye molecules attached to said polymer substrate;

(d) determining the absorption of radiation by the functional moieties and dye molecules in the polymer substrate of (b);

(e) determining the number of functional moieties in said polymer substrate of (b) relative to the number of attached dye molecules determined in (c).

(f) contacting with said biological sample the polymer substrate of (b) having said functional moiety and said dye molecule attached under suitable conditions to react said functional moiety with said analyte;

(g) measuring the absorption by radiation of the combined polymer substrate and biological sample of (f); and

(h) determining the amount of the analyte which is bound to the functional moiety by the amount of said dye molecule present.