Human hyperpolarization-activated cyclic nucleotide-gated cation channel hcn1

• US 20050014141A1
• Filed: 01/18/2002
• Published: 01/20/2005
• Est. Priority Date: 01/23/2001
• Status: Abandoned Application

• Current Assignee: Kimberly L. Folander, Richard Swanson, Yuan Liu
• Original Assignee: Kimberly L. Folander, Richard Swanson, Yuan Liu
• Inventors: Folander, Kimberly L., Liu, Yuan, Swanson, Richard
• Application Number:
  US10/466,992
• Publication Number:
  US 20050014141A1
• Time in Patent Office: Days
• US Class Current: 435/6
• CPC Class Codes: C07K 14/705 Receptors; Cell surface antigens; Cell surface determinants tumour specific antigens C07K14/4748

Abstract

The present invention is directed to novel human DNA sequences encoding human HCN1 proteins, the protein encoded by the DNA sequences, vectors comprising the DNA sequences, host cells containing the vectors, and methods of identifying inhibitors and activators of cation channels containing the human HCN1 proteins.

Claims

1. An isolated DNA comprising a nucleotide sequence encoding human HCN1.

2. The DNA of claim 1 comprising a nucleotide sequence encoding a polypeptide having an amino acid sequence selected from the group consisting of SEQ.ID.NOs.:

2, 4, 6, 8, 10, 12, 14, 16, and 18.

3. The DNA of claim 1 comprising a nucleotide sequence selected from the group consisting of:

SEQ.ID.NO.;

1, SEQ.ID.NO.;

3, SEQ.ID.NO.;

5, SEQ.ID.NO.;

7, SEQ.ID.NO.;

9, SEQ.ID.NO.;

11, SEQ.ID.NO.;

13, SEQ.ID.NO.;

15, SEQ.ID.NO.;

17, positions 26 to 2695 of SEQ.ID.NO.;

1, positions 26 to 2695 of SEQ.ID.NO.;

3, positions 26 to 2695 of SEQ.ID.NO.;

5, positions 26 to 2695 of SEQ.ID.NO.;

7, positions 26 to 2695 of SEQ.ID.NO.;

9, positions 26 to 2695 of SEQ.ID.NO.;

11, positions 26 to 2695 of SEQ.ID.NO.;

13, positions 26 to 2695 of SEQ.ID.NO.;

15, and positions 26 to 2695 of SEQ.ID.NO.;

17.

4. An isolated DNA that hybridizes under stringent conditions to the DNA of claim 3 and that encodes a protein having substantially the same biological activity as human HCN1.

5. An expression vector comprising the DNA of claim 3.

6. A recombinant host cell comprising the DNA of claim 3.

7. DNA, substantially free of other nucleic acids, comprising a nucleotide sequence encoding a polypeptide having an amino acid sequence selected from the group consisting of SEQ.ID.NOs.:

2, 4, 6, 8, 10, 12, 14, 16, and 18.

10. The protein of claim 7 comprising an amino acid sequence selected from the group consisting of SEQ.ID.NOs.:

2, 4, 6, 8, 10, 12, 14, 16, and 18.

8. DNA, substantially free of other nucleic acids, comprising a nucleotide sequence selected from the group consisting of:

SEQ.ID.NO.;

1, SEQ.ID.NO.;

3, SEQ.ID.NO.;

5, SEQ.ID.NO.;

7, SEQ.ID.NO.;

9, SEQ.ID.NO.;

11, SEQ.ID.NO.;

13, SEQ.ID.NO.;

15, SEQ.ID.NO.;

17, positions 26 to 2695 of SEQ.ID.NO.;

1, positions 26 to 2695 of SEQ.ID.NO.;

3, positions 26 to 2695 of SEQ.ID.NO.;

5, positions 26 to 2695 of SEQ.ID.NO.;

7, positions 26 to 2695 of SEQ.ID.NO.;

9, positions 26 to 2695 of SEQ.ID.NO.;

11, positions 26 to 2695 of SEQ.ID.NO.;

13, positions 26 to 2695 of SEQ.ID.NO.;

15, and positions 26 to 2695 of SEQ.ID.NO.;

17.

11. The protein of claim 8 containing a single amino acid substitution.

12. The protein of claim 8 containing two or more amino acid substitutions where the amino acid substitutions do not occur in conserved positions.

9. An isolated human HCN1 protein.

13. A protein, substantially free of other proteins, comprising an amino acid sequence selected from the group consisting of SEQ.ID.NOs.:

2, 4, 6, 8, 10, 12, 14, 16, and 18.

14. An antibody that binds specifically to a human HCN1 protein.

15. A DNA or RNA oligonucleotide probe comprising at least 10 contiguous nucleotides from SEQ.ID.NOs.:

1, 3, 5, 7, 9, 11, 13, 15, or 17.

16. A method of identifying substances that bind to cation channels containing human HCN1 protein comprising:

(a) providing cells expressing a cation channel containing human HCN1 protein;

(b) exposing the cells to a substance that is not known to bind cation channels containing human HCN1 protein;

(c) determining the amount of binding of the substance to the cells;

(d) comparing the amount of binding in step (c) to the amount of binding of the substance to control cells where the control cells are substantially identical to the cells of step (a) except that the control cells do not express human HCN1 protein;

where if the amount of binding in step (c) is greater than the amount of binding of the substance to control cells, then the substance binds to cation channels containing human HCN1 protein.

17. A method of identifying substances that bind cation channels containing human HCN1 protein comprising:

(a) providing cells expressing cation channels containing human HCN1 protein;

(b) exposing the cells to a compound that is known to bind to the cation channels containing human HCN1 protein in the presence and in the absence of a substance not known to bind to cation channels containing human HCN1 protein;

(c) determining the amount of binding of the compound to the cells in the presence and in the absence of the substance;

where if the amount of binding of the compound in the presence of the substance differs from that in the absence of the substance, then the substance binds cation channels containing human HCN1 protein.

18. A method of identifying activators or inhibitors of cation channels containing human HCN1 protein comprising:

(a) recombinantly expressing human HCN1 protein in a host cell so that the recombinantly expressed human HCN1 protein forms cation channels either by itself or by forming heteromers with other cation channel subunit proteins;

(b) measuring the biological activity of the cation channels formed in step (a) in the presence and in the absence of a substance not known to be an activator or an inhibitor of cation channels containing human HCN1 protein;

where a change in the biological activity of the cation channels formed in step (a) in the presence as compared to the absence of the substance indicates that the substance is an activator or an inhibitor of cation channels containing human HCN1 protein.