Porous glass substrates with reduced auto-fluorescence

• US 20050048571A1
• Filed: 07/29/2003
• Published: 03/03/2005
• Est. Priority Date: 07/29/2003
• Status: Abandoned Application

• Current Assignee: Corning Incorporated
• Original Assignee: Corning Incorporated
• Inventors: Montondo, Jodelle K., Danielson, Paul S.
• Application Number:
  US10/629,444
• Publication Number:
  US 20050048571A1
• Time in Patent Office: Days
• US Class Current: 435/7.100
• CPC Class Codes: B01J 2219/00641 the porous medium being continuous, e.g. porous oxide substrates
• CPC Class Codes: B01J 2219/00659 Two-dimensional arrays
• CPC Class Codes: B01J 2219/00722 Nucleotides
• CPC Class Codes: B01J 2219/00725 Peptides
• CPC Class Codes: B01J 2219/0074 Biological products
• CPC Class Codes: B01J 2219/00743 Cells
• CPC Class Codes: C03C 17/007 containing a dispersed phase, e.g. particles, fibres or flakes, in a continuous phase
• CPC Class Codes: C03C 17/04 by fritting glass powder
• CPC Class Codes: C03C 17/42 at least one coating of an organic material and at least one non-metal coating
• CPC Class Codes: C03C 2217/425 consisting of a porous layer
• CPC Class Codes: C03C 2218/114 by brushing, pouring or doctorblading
• CPC Class Codes: C03C 2218/119 by printing
• CPC Class Codes: C03C 8/14 Glass frit mixtures having non-frit additions, e.g. opacifiers, colorants, mill-additions
• CPC Class Codes: C40B 40/06 Libraries containing nucleotides or polynucleotides, or derivatives thereof
• CPC Class Codes: C40B 40/10 Libraries containing peptides or polypeptides, or derivatives thereof

Abstract

A porous inorganic substrate that may be used as a support, upon which biological, biochemical, or chemical reactions may be executed, is provided. A porous layer of the substrate is tinted with a colorant agent, and the porous substrate has at least about 15-20% less auto-fluorescence background relative to a conventional “white” porous substrate. The tinted porous layer provides improved signal to noise ratios that are important in detection metrics when performing biological or chemical binding assays. Once the porous layer is functionalized, one may immobilize probe molecules on or within the porous layer to create a microarray having a greater probe concentration and retention capability than conventional non-porous inorganic substrates, without suffering relatively high levels of auto-fluorescence and other detriments common to un-tinted porous substrates.

Claims

1. A porous substrate comprising:

a support; and

a porous region on a surface of said support, the porous region being of primarily inorganic material and having a surface upon which a number of probe molecules can be immobilized, the porous region having a tint and exhibits a reduced level of auto-fluorescence of at least about 15% relative to a comparable non-tinted porous substrate surface.

2. The porous substrate according to claim 1, wherein said porous region having a tint that reduces relative auto-fluorescence levels by at least about 20-25% over said non-tinted porous substrate surface.

3. The porous substrate according to claim 2, wherein said porous region having a tint that reduces relative auto-fluorescence levels by at least about 50% over said non-tinted porous substrate surface.

4. The porous substrate according to claim 1, wherein said porous region exhibits a reduced relative auto-fluorescence level in RFU of at least an order of magnitude over said non-tinted porous substrate surface.

5. The porous substrate according to claim 1, wherein said reduction in auto-fluorescence is over a wavelength range from about 400 nm to about 720 nm.

6. The porous substrate according to claim 5, wherein said reduction in auto-fluorescence is over a wavelength range from about 420 nm to about 700 nm.

7. The porous substrate according to claim 1, wherein said tinted porous region has a colorant component including a transition metal ion.

8. The porous substrate according to claim 1, wherein said tinted porous region has a colorant component incorporated in a composition in weight percent consisting essentially of:

9. The porous substrate according to claim 8, wherein said R is selected from the group consisting of Fe, V, and Cu.

10. The porous substrate according to claim 1, wherein said porous region has a composition consisting essentially of:

11. The porous substrate according to claim 8, wherein said glass composition is chemically and mechanically durable, and has a coefficient of thermal expansion (CTE) of between about 35-44×

10<sup>−

7</sup>/°

C.

12. The porous substrate according to claim 11, wherein said glass composition has a CTE of about 38-40×

10<sup>−

7</sup>/°

C.

13. The porous substrate according to claim 1, wherein before a GAPS-coating process, said tinted region has an average auto-fluorescence background for Cy3 and Cy5 channels of up to about 50% RFU of said un-tinted porous substrate.

14. The porous substrate according to claim 1, wherein a number of biological or chemical probes are attached at defined locations on or within said tinted porous layer.

15. The porous substrate according to claim 13, wherein said defined locations of probes assume a microarray format of at least one microspot per cm².

16. The porous substrate according to claim 13, wherein said defined locations of probes assume a microarray format of at least 10 microspots per cm².

17. The porous substrate according to claim 1, wherein said probe molecules include at least one kind of species selected from the following:

oligonucleotides, nucleotides, nucleosides, DNA, RNA, peptide nucleic acid (PNA), peptides, polypeptides, protein domains, proteins, fusion proteins, antibodies, protein-membranes, G-coupled protein receptors, gangliosides, lipids, lipid membranes, cells or cell membranes, cell-lysate, or protein-small molecule ligands.

18. A tool for performing biological or chemical assays, the tool comprises a non-porous support;

and a porous region on a surface of said support, the porous region being of primarily inorganic material and having a surface upon which a number of probe molecules may be immobilized, the porous region having a tint and exhibits a reduced level of auto-fluorescence of at least about 15% relative to a comparable non-tinted porous substrate surface.

19. The tool according to claim 18, wherein said porous region having a tint that reduces relative auto-fluorescence levels by at least about 20-25% over said non-tinted porous substrate surface.

20. The tool according to claim 18, wherein said tinted porous region has a colorant component including a transition metal ion.

21. The tool according to claim 18, wherein said tinted porous region has a colorant component incorporated in a composition in weight percent consisting essentially of:

22. The tool according to claim 21, wherein said R is selected from the group consisting of Fe, V, and Cu.

23. The tool according to claim 18, wherein said probe molecules are biological or chemical molecules, including at least one kind of the following:

oligonucleotides, nucleotides, nucleosides, DNA, RNA, peptide nucleic acid (PNA), peptides, polypeptides, protein domains, proteins, fusion proteins, antibodies, gangliosides, membrane proteins, lipids, lipid membranes, cellular membranes, cell lysates, oligosaccharides, or polysaccharides, or lectins.