Dual phase - PNA conjugates for the delivery of PNA through the blood brain barrier

• US 20050222009A1
• Filed: 10/13/2004
• Published: 10/06/2005
• Est. Priority Date: 10/14/2003
• Status: Abandoned Application

• Current Assignee: Itschak Lamensdorf, Jehoshua Katzhendler
• Original Assignee: Itschak Lamensdorf, Jehoshua Katzhendler
• Inventors: Lamensdorf, Itschak, Katzhendler, Jehoshua
• Application Number:
  US10/962,659
• Publication Number:
  US 20050222009A1
• Time in Patent Office: Days
• US Class Current: 536/24.500
• CPC Class Codes: A61K 38/00 Medicinal preparations containing peptides peptides containing beta-lactam rings A61K31/00; cyclic dipeptides not having in their molecule any other peptide link than those which form their ring, e.g. piperazine-2,5-diones, A61K31/00; ergot alkaloids of the cyclic peptide type A61K31/48; containing macromolecular compounds having statistically distributed amino acid units A61K31/74; medicinal preparations containing antigens or antibodies A61K39/00; medicinal preparations characterised by the non-active ingredients, e.g. peptides as drug carriers, A61K47/00
• CPC Class Codes: C07K 14/003 Peptide-nucleic acids (PNAs)
• CPC Class Codes: C07K 7/06 having 5 to 11 amino acids
• CPC Class Codes: C07K 7/08 having 12 to 20 amino acids gastrins C07K14/595; somatostatins C07K14/655; melanotropins C07K14/68

Abstract

The invention provides molecule comprising a nucleic acid, a peptide ligand, which binds to a specific receptor and a positively charge peptide moiety with lysosomatic properties, useful in the delivery of a nucleic acid across a cellular membrane. The invention further relates to the use of these compounds for the delivery of a nucleic acid to the brain across the blood brain barrier for diagnostic and therapeutic applications

Claims

1. A molecule represented by any one of the formulas I-IV:

[(L)_t-(N)_r-(H)_q-(P)_s]_x 

 

I.
[(L)_t-(H)_q-(N)_r-(P)_s]_x 

 

II.
[(P)_s-(N)_r-(H)_q-(L)_t]_x 

 

III.
[(P)_s-(H)_q-(N)_r-(L)_t]_x 

 

IV.

wherein N is a nucleic acid sequence in a length of 1-100 bases, L is a peptide ligand which binds to a specific receptor and P is a positively charge moiety and H is a hydrophobic moiety; and

wherein r is an integer of 1-25, t is an integer of 1-50, s is an integer of 1-25, q is an integer of 0-20, and x is an integer of 1-20.

2. The molecule according to claim 1, wherein said nucleic acid sequence is a mRNA, a cDNA, a DNA, a DNA analog, a polyamide nucleic acid (PNA), a PNA morpholino, an aminoethylprolyl (aep) PNA, a pyrrolidinyl PNA, an oligonucleotide, an oligonucleotide analog, a ribozyme or an RNAi.

3. The molecule according to claim 1, wherein said nucleic acid sequence is a PNA.

4. The molecule according to claim 1, wherein said nucleic acid sequence is an antisense, an antigene or a decoy function.

5. The molecule according to claim 1, wherein said nucleic acid sequence is neutral or negatively charged.

6. The molecule according to claim 1, wherein said peptide ligand binds a receptor to transferrin, insulin, insulin growth factor, or leptin.

7. The molecule according to claim 6, wherein said insulin growth factor is insulin growth factor-I or insulin growth factor-II.

8. The molecule according to claim 1, wherein said peptide ligand is HAIYPRH (SEQ ID. No. 1) or THRPPMWSPVWP (SEQ ID. No. 2).

9. The molecule according to claim 1, wherein said hydrophobic moiety is a nucleic acid.

10. The molecule according to claim 1, wherein said hydrophobic moiety is hydrophobic peptides, lipid acid, lipid molecules, octanol, cholesterol, hydrophobic peptide protecting group, adamantine, pyrene, eicosenoic acid, C_(6-16) glyceride lipid, phenoxazine, DMT group, cholenic acid, lithocholic acid, myristic acid, palmitic acid, heptadecyl group, hexadecylglycerol, geranyloxyhexyl group, hexadecylamine, dihydrotestosterone, 1-pyrene butyric acid, alkanoic acid, alkanol or any derivatives thereof.

11. The molecule according to claim 10, wherein said alkanoic acid is represented by the structure R—

(CH₂)n-COOH, wherein n=1-20 and R is a linear or branched alkyl.

12. The molecule according to claim 10, wherein said alkanol is represented by the structure R—

(CH₂)n-OH, wherein n=1-20 and R is a linear or branched alkyl.

13. The molecule according to claim 10, wherein said lipid acid is undecanoic acid and/or docosahexanenonic acid.

14. The molecule according to claim 10, wherein said hydrophobic peptide protecting group is Fmoc or Tboc.

15. The molecule according to claim 1, wherein said positively charge moiety is a nucleic acid.

16. The molecule according to claim 1, wherein said positively charge moiety is positively charge peptide, peptidomimetic, polycations, histidine, imidazole group, 2-O-aminopropyl, 2-O-dimethylaminopropyl, 2-O-imidazolyl-ethyl, 2-O-aminoethylamino-oxyethyl, 2-dimethylaminoethyl-oxyethyl or any derivative thereof.

17. The molecule according to claim 1, wherein said positively charge moiety comprises at least one group of arginine, polyamin and/or guanidine.

18. The molecule according to claim 17, wherein said polyamine is spermine, spermidine or putricine.

19. The molecule according to claim 1, wherein said peptide ligand, said nucleic acid sequence, said hydrophobic moiety, and said positively charge moiety are linked to each other directly via peptide bonds.

20. The molecule according to claim 1, further comprising a linker moiety linking between said peptide ligand, said hydrophobic moiety, said nucleic acid sequence and said positively charge moiety.

21. The molecule according to claim 20, wherein said linker moiety is polyethylene glycol, disulfide, amide, amine, oxyamine, oxyimine, morpholine, thioether, thiourea sulfonamide, ether, ester, carbonate, carbamate, avidin, strepavidin, biotin, praline, lysine, cysteine, guanidine or any combination thereof.

22. The molecule according to claim 21, wherein the molecular weight of said polyethylene glycol is in the range of 2000-40,000.

43. A composition comprising as an active ingredient an effective amount of one or more molecules according to claim 1, together with one or more pharmaceutically acceptable excipients or adjuvants.

45. The composition according to claim 43, formulated for oral or parenteral administration.

47. The composition according to claim 43, formulated as uncoated tablets, coated tablets, pills, capsules, powder or suspension.

49. The composition according to claim 43, formulated for intravenous administration.

51. A method for delivering a nucleic acid sequence across a cellular membrane comprising the step of applying to a cell an effective amount of one or more molecules according to claim 1.

52. The method according to claim 51, wherein said cell is an endothelial cell, neuronal cell or glial cell.

57. A method for delivering a nucleic acid sequence to the brain across the blood brain barrier, said method comprising the step of administering to a subject a composition according to claim 43.

23. A molecule represented by any one of the formulas V-VIII:

[(L)_t-(PNA)_r-(H)_q-(P)_s]_x 

 

V.
[(L)_t-(H)_q-(PNA)_r-(P)_s]_x 

 

VI.
[(P)_s-(PNA)_r-(H)_q-(L)_t]_x 

 

VII.
[(P)_s-(H)_q-(PNA)_r-(L)_t]_x 

 

VIII.

wherein the length of said PNA sequence is 1-100 bases, L is a peptide ligand which binds to a specific receptor and P is a positively charge moiety, and H is a hydrophobic moiety; and

wherein r is an integer of 1-25, t is an integer of 1-50, s is an integer of 0-25, q is an integer of 0-20 and x is an integer of 1-20.

24. The molecule according to claim 23, wherein said PNA sequence is an antisense, an antigene or a decoy function.

25. The molecule according to claim 23, wherein said PNA sequence is neutral or negatively charged.

26. The molecule according to claim 23, wherein said peptide ligand binds a receptor to transferrin, insulin, insulin growth factor, Insulin growth factor or leptin.

27. The molecule according to claim 26, wherein said insulin growth factor is insulin growth factor-I or insulin growth factor-II.

28. The molecule according to claim 23, wherein said peptide ligand is HAIYPRH (SEQ ID. No. 1) or THRPPMWSPVWP (SEQ ID. No. 2).

29. The molecule according to claim 23, wherein said hydrophobic moiety is a nucleic acid.

30. The molecule according to claim 23, wherein said hydrophobic moiety is hydrophobic peptides, lipid acid, lipid molecules, octanol, cholesterol, hydrophobic peptide protecting group, adamantine, pyrene, eicosenoic acid, C_(6-16) glyceride lipid, phenoxazine, DMT group, cholenic acid, lithocholic acid, myristic acid, palmitic acid, heptadecyl group, hexadecylglycerol, geranyloxyhexyl group, hexadecylamine, dihydrotestosterone, 1-pyrene butyric acid, alkanoic acid, alkanol or any derivatives thereof.

31. The molecule according to claim 30, wherein said alkanoic acid is represented by the structure R—

(CH₂)n-COOH, wherein n=1-20 and R is a linear or branched alkyl.

32. The molecule according to claim 30, wherein said alkanol is represented by the structure R—

(CH₂)n-OH, wherein n=1-20 and R is a linear or branched alkyl.

33. The molecule according to claim 30, wherein said lipid acid is undecanoic acid and/or docosahexanenonic acid.

34. The molecule according to claim 30, wherein said hydrophobic peptide protecting group is Fmoc or Tboc.

35. The molecule according to claim 23, wherein said positively charge moiety is a nucleic acid.

36. The molecule according to claim 23, wherein said positively charge moiety is positively charge peptide, peptidomimetic, polycations, histidine, imidazole group, 2-O-aminopropyl, 2-O-dimethylaminopropyl, 2-O-imidazolyl-ethyl, 2-O-aminoethylamino-oxyethyl, 2-dimethylaminoethyl-oxyethyl or any derivative thereof.

37. The molecule according to claim 23, wherein said positively charge moiety comprises at least one group of arginine, polyamin and/or guanidine.

38. The molecule according to claim 37, wherein said polyamine is spermine, spermidine or putricine.

39. The molecule according to claim 23, wherein said peptide ligand, said PNA sequence, said hydrophobic moiety and said positively charge moiety are linked to each other directly via peptide bonds.

40. The molecule according to claim 23, further comprising a linker moiety linking between said peptide ligand, said hydrophobic moiety, said PNA sequence and said positively charge moiety.

41. The molecule according to claim 40, wherein said linker moiety is polyethylene glycol, disulfide, amide, amine, oxyamine, oxyimine, morpholine, thioether, thiourea sulfonamide, ether, ester, carbonate, carbamate, avidin, strepavidin, biotin, praline, lysine, cysteine, guanidine or any combination thereof.

42. The molecule according to claim 41, wherein the molecular weight of said polyethylene glycol is in the range of 2000-40,000.

44. A composition comprising as an active ingredient an effective amount of one or more molecules according to claim 23, together with one or more pharmaceutically acceptable excipients or adjuvants.

46. The composition according to claim 44, formulated for oral or parenteral administration.

48. The composition according to claim 44, formulated as uncoated tablets, coated tablets, pills, capsules, powder or suspension.

50. The composition according to claim 44, formulated for intravenous administration.

53. A method for delivering a PNA sequence across a cellular membrane comprising the step of applying to a cell an effective amount of one or more molecules according to claim 23.

54. The method according to claim 53, wherein said cell is an endothelial cell, neuronal cell or glial cell.

56. A method for delivering a PNA sequence to the brain across the blood brain barrier, said method comprising the step of administering to a subject an effective amount of one or more molecules according to claim 23.

58. A method for delivering a PNA sequence to the brain across the blood brain barrier, said method comprising the step of administering to a subject a composition according to claim 44.

55. A method for delivering a nucleic acid sequence to the brain across the blood brain barrier, said method comprising the step of administering to a subject an effective amount of one or more molecules according to claim.