Porous substrates and arrays comprising the same

• US 20060141486A1
• Filed: 12/29/2004
• Published: 06/29/2006
• Est. Priority Date: 12/29/2004
• Status: Abandoned Application

• Current Assignee: Corning Incorporated
• Original Assignee: Corning Incorporated
• Inventors: Hong, Yulong, Li, Xinghua, Ferrie, Ann M., Yuen, Po Ki, Mozdy, Eric J., Fang, Ye, Tepesch, Patrick D., Tanner, Cameron W., Wight, John F. Jr., Fu, Xiaodong, Muller, Dirk, Monahan, Beth C., Leslie, Thomas M., Coonan, Everett W.
• Application Number:
  US11/027,400
• Publication Number:
  US 20060141486A1
• Time in Patent Office: Days
• US Class Current: 435/6
• CPC Class Codes: B01J 2219/00315 Microtiter plates
• CPC Class Codes: B01J 2219/00317 Microwell devices, i.e. having large numbers of wells
• CPC Class Codes: B01J 2219/00423 using filtration, e.g. through porous frits
• CPC Class Codes: B01J 2219/00639 the compounds being trapped in or bound to a porous medium
• CPC Class Codes: B01J 2219/00644 the porous medium being present in discrete locations, e.g. gel pads
• CPC Class Codes: B01J 2219/00722 Nucleotides
• CPC Class Codes: B01L 2300/0819 Microarrays; Biochips
• CPC Class Codes: B01L 3/5085 for multiple samples, e.g. microtitration plates

Abstract

The present invention relates to arrays comprising porous substrates for attachment of nucleic acids, polypeptides, membranes, or other biological or organic materials. In many embodiments, the arrays of the present invention have a flow-through configuration such that washing buffers or samples can access to the porous substrates from at least two sides of the arrays. The present invention also features arrays comprising UV-compatible porous substrates, arrays comprising three-dimensional membranes in sol-gels, and arrays comprising silica-based porous substrates prepared using a low-temperature fusion process.

Claims

1. An array comprising at least one substrate support and a plurality of discrete regions, each said discrete region comprising a porous substrate attached to or supported by said at least one substrate support, and said porous substrate being accessible from at least two sides of said array.

2. The array of claim 1, wherein said porous substrate is attached to or supported by a surface of said substrate support, and wherein said substrate support comprises at least one channel which passes through said substrate support from said surface to a surface opposite thereto, and a wash buffer is capable of communicating from said porous substrate to said opposite surface through said channel.

3. The array of claim 1, wherein said substrate support comprises a multi-well microplate, and said porous substrate resides in a well of said microplate, and wherein said substrate support comprises at least one channel which passes through said substrate support from a bottom surface thereof to said well, and a wash buffer is capable of communicating from said bottom surface to said porous substrate through said channel.

4. The array of claim 1, wherein said substrate support comprises a holey microplate including a plurality of openings, and said porous substrate is positioned in one of said openings.

5. The array of claim 1, wherein said at least one substrate support comprises two holey plates, and said porous substrate is part of a porous material sheet which is sandwiched between said two holey plates, and wherein said two holey plates are aligned such that a wash buffer is capable of accessing to said porous substrate from both sides of said array.

6. The array of claim 1, wherein said porous substrate comprises anodic aluminum oxide, fused silica or sol-gel.

7. The array of claim 6, wherein said porous substrate is stably associated with a membrane, a nucleic acid, a polypeptide, a polysaccharide, a lipid, a cell, a cell component, a tissue, or a tissue part.

8. The array of claim 6, wherein said porous substrate is stably associated with a membrane comprising a transmembrane protein.

9. The array of claim 6, wherein said porous substrate is stably associated with a membrane comprising a membrane protein selected from the group consisting of a G protein coupled receptor, an ion channel, a transporter, and a kinase receptor.

10. The array of claim 1, wherein said porous substrate is a gelation product of a mixture comprising a sol-gel precursor and a membrane.

11. The array of claim 10, wherein said sol-gel precursor is a tetraalkoxysilane or a trialkoxysilane.

12. The array of claim 1, wherein said porous substrate is a fusion product of a mixture comprising silica beads and at least one silane.

13. The array of claim 12, wherein said silane is selected from the group consisting of 3-acyloxypropyl-trimethoxysilane, allyltrichlorosilane, 3-aminpropyltriethoxysilane, N-(6-aminohexyl)aminopropyl-trimethoxysilane, bis(triethoxysilye)methane, 2-(3-cyclohexenyl)ethyl) triethoxysilane, 3-glycidoxypropyl-trimethoxysilane, and tetramethoxysilane.

14. The array of claim 1, wherein said porous substrate is UV-compatible.

15. The array of claim 14, wherein said porous substrate comprises fused silica, calcium fluoride or sapphire.

16. The array of claim 1, wherein said porous substrate consists essentially of substantially pure fused silica.

17. An array comprising a substrate support including a plurality of discrete regions, each said discrete region comprising a porous substrate which is a fusion product of a mixture comprising silica beads and at least one silane.

18. The array of claim 17, wherein said porous substrate is prepared by a method comprising the steps:

formulating said silica beads in an organic solvent comprising said at least one silane;

depositing said formulated silica beads in one of said discrete regions; and

fusing said silica beads to form said porous substrate.

19. The array of claim 18, wherein said fusing is performed at a temperature of no greater than about 200°

C.

20. The array of claim 18, wherein said silane is selected from the group consisting of 3-acyloxypropyl-trimethoxysilane, allyltrichlorosilane, 3-aminpropyltriethoxysilane, N-(6-aminohexyl)aminopropyl-trimethoxysilane, bis(triethoxysilye)methane, 2-(3-cyclohexenyl)ethyl) triethoxysilane, 3-glycidoxypropyl-trimethoxysilane, and tetramethoxysilane.

21. The array of claim 18, wherein the concentration of said at least one silane in said mixture is from about 0.01% to about 10% by volume.

22. The array of claim 18, wherein said substrate support comprises a polymeric material, an inorganic material, or a metal.

23. The array of claim 18, wherein said porous substrate is stably associated with a surface of said substrate support, and said substrate support comprises at least one channel which passes through said substrate support from said surface thereof to a surface opposite thereto, and wherein a wash buffer is capable of communicating from said opposite surface to said porous substrate through said channel.

24. The array of claim 18, wherein said porous substrate is stably associated with a membrane, a nucleic acid, a polypeptide, a polysaccharide, a lipid, a cell, a cell component, a tissue, or a tissue part.

25. A method of fabricating an array, comprising the steps of:

formulating silica beads in an organic solvent comprising said at least one silane;

depositing said formulated silica beads in discrete regions of a substrate support; and

fusing said silica beads to form porous substrates in said discrete regions.

26. An array comprising a substrate support including a plurality of discrete regions, each of which comprises a gelation product of a mixture comprising at least one sol-gel precursor and a membrane.

27. The array of claim 26, wherein said gelation product is prepared by a method comprising the steps of:

mixing said at least one sol-gel precursor with said membrane;

hydrolyzing said at least one sol-gel precursor to form a sol-gel including said membrane; and

depositing said sol-gel into said discrete regions.

28. The array of claim 26, wherein said gelation product is prepared by a method comprising the steps of:

mixing said at least one sol-gel precursor with said membrane under conditions that no significant gelation occurs;

depositing said mixed sol-gel precursor and membrane into said discrete regions; and

initiating gelation in said discrete regions to form a sol-gel including said membrane.

29. The array according to claim 26, wherein said sol-gel precursor is a tetraalkoxysilane or a trialkoxysilane.

30. The array according to claim 26, wherein said membrane comprises a membrane protein selected from the group consisting of a G protein coupled receptor, an ion channel, a transporter, and a kinase receptor.

31. A method for fabricating an array, comprising the steps of:

mixing at least one sol-gel precursor with a membrane under conditions that no significant gelation occurs;

depositing said mixed sol-gel precursor and membrane into discrete regions on a substrate support; and

initiating gelation in each of said discrete regions to form a sol-gel including said membrane.

32. A method for fabricating an array, comprising the steps of:

mixing at least one sol-gel precursor with a membrane;

hydrolyzing said at least one sol-gel precursor to form a sol-gel including said membrane; and

deposit said sol-gel into discrete regions of a substrate support.

33. An array comprising a substrate support including a plurality of discrete regions, each of which comprises a UV-compatible porous substrate.

34. The array of claim 33, wherein said UV-compatible porous substrate comprises silica-based glass, calcium fluoride or sapphire.

35. The array of claim 33, wherein said UV-compatible porous substrate comprises fused silica.

36. The array of claim 33, wherein said UV-compatible porous substrate consists essentially of substantially pure fused silica.

37. The array of claim 36, wherein said fused silica consists essentially of silica beads with particle sizes of from about 1 nm to about 5 μ

m.

38. The array of claim 36, wherein said fused silica consists essentially of silica beads with particle sizes of from about 0.3 μ

m to about 1.5 μ

m.

39. The array of claim 36, wherein said fused silica consists essentially of silica beads with particle sizes of about 1 μ

m.

40. The array of claim 33, wherein said substrate support is UV-compatible.

41. The array of claim 40, wherein said substrate support comprises silica-based glass, calcium fluoride or sapphire.

42. The array of claim 40, wherein said substrate support comprises fused silica.

43. The array of claim 40, wherein said substrate support consists essentially of substantially pure fused silica.

44. The array of claim 40, wherein said fused silica consists essentially of silica beads with particle sizes of from about 1 nm to about 5 μ

m.

45. The array of claim 40, wherein said fused silica consists essentially of silica beads with particle sizes of from about 0.3 μ

m to about 1.5 μ

m.

46. The array of claim 40, wherein said fused silica consists essentially of silica beads with particle sizes of about 1 μ

m.

47. A silica-based porous flow-through microplate fabricated according to the following steps:

producing a plurality of channels by sand blasting or laser drilling at predetermined locations on a glass plate;

depositing patches of silicate frits to said predetermined locations;

sintering to consolidate said frits to form porous substrates; and

assembling the glass plate into a microplate.

48. A flow-through microplate fabricated according to the following steps:

producing a plurality of channels by injection molding at predetermined regions on a substrate support;

reformulating silicate frits with silanes;

depositing patches of sol-gels containing said silicate frits and silanes to the predetermined regions on the substrate support;

consolidating said silicate frits and silanes to form porous substrates; and

assembling the substrate support to form a microplate.

49. A stand-alone porous disc-based microplate fabricated according to the following steps:

injection molding to make a holey microplate, said holey microplate comprising recess areas in predetermined regions on a side wall of a well of said holey microplate;

depositing patches of silicate frits to a substrate support;

consolidating the silicate frits to form standalone porous substrates; and

positioning the standalone porous substrates into the recess areas of the holey microplate.

50. A flow-through polymeric microplate comprising polymeric porous substrates, said polymeric microplate being fabricated according to the following steps:

producing channels by injection molding at predetermined locations on a polymeric substrate support;

positioning polymeric porous substrates to the predetermined locations; and

assembling the polymeric substrate support and the polymeric porous substrates to form a microplate by thermal bonding or adhesive chemistry.

51. A flow-through microplate prepared according to the following steps:

positional etching of a glass substrate to form separate porous substrate patches at predetermined locations such that only a top layer of the glass substrate becomes porous;

sand blasting or laser drilling to prepare at least one channel underneath each said porous substrate patch at the predetermined locations such that the channel passes through the substrate; and

assembling the substrate to form a microplate.