Polymer-coated substrates for binding biological molecules

• US 20060257919A1
• Filed: 07/18/2006
• Published: 11/16/2006
• Est. Priority Date: 09/03/2002
• Status: Abandoned Application

• Current Assignee: Anthony G. Frutos, Jinlin Peng, Joydeep Lahiri, Thomas M. Leslie
• Original Assignee: Anthony G. Frutos, Jinlin Peng, Joydeep Lahiri, Thomas M. Leslie
• Inventors: Peng, Jinlin, Frutos, Anthony G., Lahiri, Joydeep, Leslie, Thomas M.
• Application Number:
  US11/488,228
• Publication Number:
  US 20060257919A1
• Time in Patent Office: Days
• US Class Current: 435/6
• CPC Class Codes: B82Y 30/00 Nanotechnology for materials or surface science, e.g. nanocomposites
• CPC Class Codes: G01N 33/54393 Improving reaction conditions or stability, e.g. by coating or irradiation of surface, by reduction of non-specific binding, by promotion of specific binding
• CPC Class Codes: G01N 33/548 Carbohydrates, e.g. dextran

Abstract

A substrate, which that is capable of attaching biomolecules, and a method for preparing the substrate are provided. The substrate has a reactive surface that can covalently attach a polymer coating containing functional groups, which can reduce nonspecific binding of biomolecules to the surface for a biological array. Optionally, at least a portion of the substrate may be coated with an intermediate tie layer, which enhances the covalent bonding between the polymer coating with the underlying substrate. The present invention also pertains to a method that uses electrostatic blocking agents to reduce non-specific binding of proteins to a substrate, especially anhydride-modified surfaces.

Claims

1. A substrate for supporting a biological array, the substrate comprising:

a reactive surface to which a polymer coating can attach by covalent bonds;

an even coating of a polymer containing functional groups, which can reduce nonspecific binding of various biomolecules to a polymer-coated substrate surface.

2. The substrate according to claim 1, wherein said biomolecules attach to said polymer-coated substrate in sufficient amounts under about 6 hours.

4. The substrate according to claim 1, further comprising an intermediate tie-layer on at least a surface of said substrate to enhance covalent bonds between said substrate and said polymer coating.

5. The substrate according to claim 4, wherein the tie-layer comprises reactive polar moieties.

6. The substrate according to claim 5, wherein said reactive polar moieties may include:

amino group, thiol group, hydroxyl group, carboxyl group, acrylic acid, other organic and inorganic acid, esters, anhydrides, aldehydes, epoxides, and their derivatives or salts.

7. The substrate according to claim 5, wherein said reactive polar moieties moieties may be straight or branched-chain aminosilane, aminoalkoxysilane, aminoalkylsilane, aminoarylsilane, aminoaryloxysilane, derivatives or salts thereof.

8. The substrate according to claim 7, wherein said aminoalkylsilane moieties may include:

γ

-aminopropyl trimethoxysilane, N-(beta-aminoethyl)-γ

-aminopropyl trimethoxysilane, N-(beta-aminoethyl)-γ

-aminopropyl triethoxysilane or N′

-(beta-aminoethyl)-γ

-aminopropyl methoxysilane.

9. The substrate according to claim 4, wherein the tie-layer is attached to the substrate by covalent binding or other strong chemical interactions.

10. The substrate according to claim 4, wherein the tie-layer comprises a self-assembled monolayer (SAM).

11. The substrate according to claim 10, wherein the SAM comprises 11-mercaptoundecylamine or other amine-terminated alkanethiols.

12. The substrate according to claim 1, wherein the substrate includes any stable solid of a desired dimension selected from either a plastic, a polymer or co-polymer substance, a ceramic, a glass, a metal, a crystalline material, or any combinations thereof, or a coating of one material on another.

13. The substrate according to claim 12, wherein the substrate is of a (semi) noble metal;

glass material;

metallic or non-metallic oxides;

crystalline material;

transition metal; and

plastic, polymers or copolymers.

14. The substrate according to claim 1, wherein the substrate is a planar slide made from a borosilicate or boroaluminosilicate glass.

15. The substrate according to claim 1, wherein the polymer is either linear or non-linear

16. The substrate of according to claim 1, wherein the polymer coating comprises a copolymer.

17. The substrate according to claim 16, wherein the copolymer may comprise both hydrophilic and hydrophobic units.

18. The substrate according to claim 1, wherein the polymer coating comprises an anhydride functional group.

19. The substrate according to claim 18, wherein the polymer coating comprises a maleic anhydride and another copolymer unit.

20. The substrate according to claim 17, wherein said copolymer comprises:

maleic anhydride, styrene, tetradecene, octadecene, methyl vinyl ether, triethylene glycol methyl vinyl ether, butylvinyl ether;

or divinylbenzene.

21. The substrate according to claim 16, wherein the polymer or copolymer may include:

poly(divinylbenzene), poly(methyl methacrylate), poly(vinyl acetate-maleic anhydride), poly(dimethylsiloxane) monomethacrylate;

copolymers such as poly(styrene-co-maleic anhydride), poly(styrene-co-butadiene), poly(styrene-co-divinylbenzene), poly(ethylene-alt-maleic anhydride), poly(isobutylene-alt-maleic anhydride), poly(maleic anhydride-alt-1-octadecene), poly(maleic anhydride-alt-1-tetradecene), poly(2-vinylpyridine-co-styrene), poly(styrene-co-vinylbenzyl chloride-co-divinylbenzene), poly(styrene-co-vinylbenzylamine-co-divinylbenzene), poly(maleic anhydride-alt-methyl vinyl ether).

22. The substrate according to claim 1, wherein the polymer coating is at least a monolayer.

23. The substrate according to claim 1, wherein the polymer coating has a thickness of about 20 Å

-1000 Å

.

24. The substrate according to claim 1, the polymer coating has a thickness of up to a few centimeters.

25. The substrate according to claim 1, wherein said biomolecules exhibit specific affinity for another molecule through covalent or non-covalent bonding.

26. The substrate according to claim 1, wherein said biomolecules include:

natural or synthetic oligonucleotides;

natural or modified/blocked nucleotides/nucleosides;

nucleic acids (DNA) or (RNA);

proteins or fragments of proteins;

peptides which may contain natural or modified/blocked amino acids;

antibodies;

haptens;

biological ligands;

protein membranes;

lipid membranes; and

cells.

27. The substrate according to claim 1, wherein said biomolecules are oligonucleotides.

28. The substrate according to claim 27, wherein said oligonucleotides are from about 5 to about 500 nucleotides.

29. The substrate according to claim 28, wherein said oligonucleotides are from about 5 to about 200 nucleotides.

30. The substrate according to claim 29, wherein said oligonucleotides are from about 10 to about 100 nucleotides.

31. The substrate according to claim 1, further comprising a charged compound that has good non-specific binding properties itself, when binding proteins.

32. The substrate according to claim 31, wherein said charged compound is positively charged.

33. The substrate according to claim 31, wherein said compound includes a positively charged dextran to negate a negatively charged surface of the substrate for binding proteins.

34. A method for preparing a substrate according to claim 1 to support an array of biomolecules, the method comprising:

providing a substrate of a suitable material;

preparing on the substrate a reactive surface for attaching a polymer coating; and

, applying an polymer coating in an even layer to the reactive surface of the substrate.

101. The substrate according claim 1, wherein the substrate comprises an intermediate tie-layer on at least a surface of said substrate to enhance covalent bonds between said substrate and said polymer coating, wherein the tie-layer is derived from 3-aminopropyl trimethoxysilane, and the polymer is poly(ethylene-alt-maleic anhydride).

102. The substrate according claim 34, wherein the substrate is glass.

103. A method for preparing a substrate of claim 1, the method comprising:

providing a substrate of a suitable material;

preparing on the substrate a reactive surface for attaching a polymer coating; and

, applying a polymer coating in an even layer to the reactive surface of the substrate.

3. (canceled)

35-61. -61. (canceled)

62. A method for making a biological array, the method comprising:

providing a substrate;

preparing a reactive surface on said substrate for attaching a polymer coating;

applying a polymer coating to the reactive surface of the substrate; and

, depositing biomolecules onto said polymer-coated surface.

63-100. -100. (canceled)