Fluidic circuits, methods and apparatus for use of whole blood samples in colorimetric assays

• US 20070166721A1
• Filed: 06/23/2004
• Published: 07/19/2007
• Est. Priority Date: 06/27/2003
• Status: Abandoned Application

• Current Assignee: Nagaoka & Co., Ltd.
• Original Assignee: Nagaoka & Co., Ltd.
• Inventors: Gordon, John, Coombs, James, Phan, Brigitte, Lam, Amethyst
• Application Number:
  US10/874,817
• Publication Number:
  US 20070166721A1
• Time in Patent Office: Days
• US Class Current: 435/6
• CPC Class Codes: B01F 25/433 Mixing tubes wherein the shape of the tube influences the mixing, e.g. mixing tubes with varying cross-section or provided with inwardly extending profiles
• CPC Class Codes: B01F 25/4331 Mixers with bended, curved, coiled, wounded mixing tubes or comprising elements for bending the flow
• CPC Class Codes: B01F 33/30 Micromixers
• CPC Class Codes: B01F 35/71 Feed mechanisms with proportioning B01F35/80
• CPC Class Codes: B01F 35/712 for feeding fluids
• CPC Class Codes: B01F 35/714 for feeding predetermined amounts B01F35/88 takes precedence
• CPC Class Codes: B01F 35/71725 using centrifugal forces
• CPC Class Codes: B01L 2200/16 Reagents, handling or storing thereof
• CPC Class Codes: B01L 2300/021 Identification, e.g. bar codes
• CPC Class Codes: B01L 2300/024 Storing results with means integrated into the container
• CPC Class Codes: B01L 2300/0803 Disc shape
• CPC Class Codes: B01L 2300/0806 Standardised forms, e.g. compact disc [CD] format
• CPC Class Codes: B01L 2300/0867 Multiple inlets and one sample wells, e.g. mixing, dilution
• CPC Class Codes: B01L 2400/0409 centrifugal forces
• CPC Class Codes: B01L 3/5023 with a sample being transported to, and subsequently stored in an absorbent for analysis
• CPC Class Codes: B01L 3/5027 by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip B01L3/5023 takes precedence; micromixers B01F33/30; microreactors for synthesis B01J19/0093; microcapillary devices in general B81B1/00
• CPC Class Codes: B01L 3/502707 characterised by the manufacture of the container or its components by shaping or joining plastic parts B29C59/00, B29C65/00; by laminating B32B37/00; manufacture of microstructural devices in general B81C
• CPC Class Codes: B01L 3/502723 characterised by venting arrangements
• CPC Class Codes: G01N 2035/00356 Holding samples at elevated temperature (incubation)
• CPC Class Codes: G01N 2035/0097 monitoring reactions as a function of time
• CPC Class Codes: G01N 21/25 : Colour; Spectral properties, i.e. comparison of effect of material on the light at two or more different wavelengths or wavelength bands
• CPC Class Codes: G01N 31/22 : using chemical indicators G01N31/02 takes precedence
• CPC Class Codes: G01N 33/528 : Atypical element structures, e.g. gloves, rods, tampons, toilet paper
• CPC Class Codes: G01N 33/54366 : Apparatus specially adapted for solid-phase testing
• CPC Class Codes: G01N 35/00069 : whereby the sample substrate is of the bio-disk type, i.e. having the format of an optical disk

Abstract

When the quantification of an analyte is based on a color change detected by a change in the amount of light transmitted or reflected, undiluted samples often saturate the detection range of the assay. Thus, very often, the sample needs to be diluted for reliable quantification. Disclosed are systems and method, including various configurations of fluidic circuits for us on an optical bio-disc, that advantageously allow the use of undiluted and/or whole blood samples for colorimetric assays on optical bio-disc is described.

Claims

1. A fluidic circuit for analysis of a sample, comprising:

a reagent source channel having a first end and a second end;

a sample flow channel having a first end and a second end;

a buffer chamber having a buffer inlet port for receiving an amount of buffer, said buffer chamber in fluid communication with said first end of said reagent source channel;

a sample loading chamber having a sample inlet port for receiving samples, said sample loading chamber in fluid communication with said first end of said sample flow channel;

a mixing zone in fluid communication with said second end of said reagent source channel and said second end of said sample flow channel;

a mixing channel having a first and a second end, said first end of said mixing chamber in fluid communication with said mixing zone;

an analysis chamber in fluid communication with said second end of said mixing channel;

a vent channel in fluid communication with said analysis chamber; and

a vent port in fluid communication with said vent channel.

2. The fluidic circuit according to claim 1 wherein said mixing channel is configured as a switchback channel having corners that are at 90 degree angles to promote turbulent flow thereby enhancing mixing of fluids.

3. The fluidic circuit according to claim 1 wherein said mixing channel is in a sawtooth configuration having angled corners to promote turbulent flow thereby enhancing mixing of fluids.

4. The fluidic circuit according to claim 1 further comprising a reagent release area located within said reagent source channel.

5. The fluidic circuit according to claim 4 wherein reagents are deposited in said reagent release area.

6. The fluidic circuit according to claim 4 further comprising a reagent matrix material placed within said reagent release area.

7. The fluidic circuit according to claim 6 wherein reagents are deposited on said reagent matrix material.

8. An optical bio-disc for analysis of a sample comprising:

a substrate having encoded information associated therewith, said encoded information being readable by a disc drive assembly; and

a fluidic circuit associated with said substrate, said fluidic circuit comprising;

a reagent source channel having a first end and a second end;

a reagent matrix material formed within said reagent source channel;

a sample flow channel having a first and a second end;

a buffer chamber having a buffer inlet port for receiving an amount of buffer, said buffer chamber in fluid communication with said first end of said reagent source channel;

a sample loading chamber having a sample inlet port for receiving samples, said sample loading chamber in fluid communication with said first end of said sample flow channel;

a mixing zone in fluid communication with said second end of said reagent source channel and said second end of said sample flow channel;

a mixing channel having a first and a second end, said first end of said mixing chamber in fluid communication with said mixing zone;

an analysis chamber in fluid communication with said second end of said mixing channel;

a vent channel in fluid communication with said analysis chamber; and

a vent port in fluid communication with said vent channel.

9. A method for making an optical bio-disc for analysis of a sample, said method of making comprising the steps of:

providing a substantially circular substrate having encoded information associated therewith, said encoded information being readable by a disc drive assembly; and

providing a channel layer associated with said substrate;

providing a cap portion associated with said channel layer; and

forming a fluidic circuit within said channel layer, said fluidic circuit comprising;

a reagent source channel having a first end and a second end;

a reagent matrix material within said reagent source channel;

a sample flow channel having a first and a second end;

a buffer chamber for receiving an amount of buffer, said buffer chamber in fluid communication with said first end of said reagent source channel;

a buffer inlet port on said cap portion, said buffer inlet port in fluid communication with said buffer chamber;

a sample loading chamber for receiving samples, said sample loading chamber in fluid communication with said first end of said sample flow channel;

a sample inlet port on said cap portion, said inlet port in fluid communication with said sample loading chamber;

a mixing zone in fluid communication with said second end of said reagent source channel and said second end of said sample flow channel;

a mixing channel having a first and a second end, said first end of said mixing chamber in fluid communication with said mixing zone;

an analysis chamber in fluid communication with said second end of said mixing channel;

a vent channel in fluid communication with said analysis chamber; and

a vent port in said cap portion in fluid communication with said vent channel.

10. The method according to claim 9 further comprising the step of depositing reagents onto said reagent matrix material.

11. The method according to claim 10 further comprising the step of depositing a buffer into said buffer chamber.

12. A method of using an optical bio-disc comprising:

loading a sample into a sample loading chamber of a fluidic circuit;

placing said optical bio-disc into an optical disc drive;

reading an encoded information using said optical disc drive;

rotating said optical bio-disc to cause a buffer to move into a reagent release channel through a reagent matrix material thereby dissolving reagents deposited in said reagent matrix material producing a reagent buffer, said rotation also causes said sample to flow through a sample flow channel;

continuing said rotating step to further cause said reagent buffer and said sample to flow into said mixing zone and into said mixing chamber thereby mixing said sample and reagent buffer producing a reaction mixture;

continuing further said rotating step to cause the reaction mixture to move into said analysis chamber;

incubating said reaction mixture in said analysis chamber to allow said reagents to react with any analyte present in said sample to produce a detectable signal; and

scanning a beam of electromagnetic radiation through said analysis chamber using said optical disc drive to determine the presence and amount of said detectable signal.

13. The method according to claim 12 wherein said sample is a whole blood sample.

14. The method according to claim 13 wherein said whole blood sample is undiluted.

15. The method according to claim 12 wherein said buffer is selected from the group comprising sodium acetate, phosphate, Tris and PBS.

16. The method according to claim 12 wherein said reagent matrix material is selected from the group comprising hydrophilic polyethersulfone membrane, nitrocellulose, cellulose and cellulose acetate.

17. A fluidic circuit for analysis of a sample, comprising:

an analysis chamber;

a vent port in fluid communication with said vent channel.

a buffer chamber having a buffer inlet port for receiving an amount of buffer, said buffer chamber in fluid communication with said analysis chamber; and

a sample chamber having a sample inlet port for receiving samples, said sample loading chamber in fluid communication with said analysis chamber;

18. The fluidic circuit according to claim 17 further comprising a reagent release area located within said buffer chamber.

19. The fluidic circuit according to claim 18 wherein reagents are deposited in said reagent release area.

20. The fluidic circuit according to claim 18 further comprising a reagent matrix material placed within said reagent release area.

21. The fluidic circuit according to claim 20 wherein reagents are deposited on said reagent matrix material.

22. A method for performing an assay, comprising:

introducing a biological sample into a channel or reservoir in a bio-optical disk, wherein the bio-optical disk includes data or program information relevant to conducting or interpreting an assay for an analyte;

contacting the sample with one or more reagents that produce a first calorimetric signal in the presence of analyte in the sample;

contacting the said one or more reagents with a species that interacts with one or more of said reagents in competition with any analyte in the sample, wherein any colorimetric signal produced as a result of the presence of said species is spectrally distinguishable from the first colorimetric signal; and

measuring said first calorimetric signal to quantitate the amount of analyte, if any, in said sample.

23. The method of claim 22, wherein said species produces a second calorimetric signal in cooperation with said reagents, further comprising measuring said second colorimetric signal and comparing the magnitude thereof with said first calorimetric signal.

24. The method of claim 22, wherein said species produces a second calorimetric signal that is largely or wholly outside of a spectral range of sensitivity of a detector, such that said measuring step primarily or wholly involves measuring only said first calorimetric signal.

25. The method of claim 22, wherein said measuring step is performed in a disk drive and said species does not produce a signal that is substantially measured by said disk drive.

26. The method of claim 22, wherein one or more of said contacting steps is performed by moving fluid in said disk by spinning said disk at a predetermined speed.

27. The method of claim 22, wherein said disk includes computer-readable information relative to calibration.

28. The method of claim 22, wherein said disk includes computer-readable information that controls the performance of at least one aspect of the method, wherein the method is performed in a disk drive.