EphA2 BiTE molecules and uses thereof

• US 20080044413A1
• Filed: 12/21/2006
• Published: 02/21/2008
• Est. Priority Date: 12/21/2005
• Status: Abandoned Application

• Current Assignee: Micromet AG (Amgen Inc.), Medimmune LLC (Astrazeneca PLC)
• Original Assignee: Medimmune LLC (Astrazeneca PLC)
• Inventors: Bruckheimer, Elizabeth, Roff, Shannon, Lutterbuese, Petra, Kiener, Peter, Kufer, Peter, Baeuerle, Patrick, Kinch, Michael, Lutterbuese, Ralf, Hammond, Scott, Schlereth, Bernd
• Application Number:
  US11/645,290
• Publication Number:
  US 20080044413A1
• Time in Patent Office: Days
• US Class Current: 424/135.1
• CPC Class Codes: A61P 11/00 Drugs for disorders of the respiratory system
• CPC Class Codes: A61P 11/06 Antiasthmatics
• CPC Class Codes: A61P 13/12 of the kidneys
• CPC Class Codes: A61P 17/00 Drugs for dermatological disorders
• CPC Class Codes: A61P 17/06 Antipsoriatics
• CPC Class Codes: A61P 27/02 Ophthalmic agents
• CPC Class Codes: A61P 31/00 Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
• CPC Class Codes: A61P 35/00 Antineoplastic agents
• CPC Class Codes: A61P 43/00 Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
• CPC Class Codes: A61P 9/00 Drugs for disorders of the cardiovascular system
• CPC Class Codes: A61P 9/10 for treating ischaemic or atherosclerotic diseases, e.g. antianginal drugs, coronary vasodilators, drugs for myocardial infarction, retinopathy, cerebrovascula insufficiency, renal arteriosclerosis
• CPC Class Codes: C07K 16/2809 against the T-cell receptor (TcR)-CD3 complex
• CPC Class Codes: C07K 16/2866 against receptors for cytokines, lymphokines, interferons
• CPC Class Codes: C07K 16/30 from tumour cells
• CPC Class Codes: C07K 2317/24 containing regions, domains or residues from different species, e.g. chimeric, humanized or veneered
• CPC Class Codes: C07K 2317/31 multispecific
• CPC Class Codes: C07K 2317/56 variable (Fv) region, i.e. VH and/or VL
• CPC Class Codes: C07K 2317/565 Complementarity determining region [CDR]
• CPC Class Codes: C07K 2317/567 Framework region [FR]
• CPC Class Codes: C07K 2317/92 Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value
• CPC Class Codes: C07K 2319/30 : Non-immunoglobulin-derived peptide or protein having an immunoglobulin constant or Fc region, or a fragment thereof, attached thereto

Abstract

The present invention relates to bispecific single chain antibodies comprising a first binding domain that immunospecifically binds to the T-cell antigen CD3 and a second binding domain that immunospecifically binds to the EphA2 receptor. Such bispecific single chain antibodies are encompassed by the term “EphA2-BiTEs.” The present invention further relates to methods and compositions designed for the treatment, prevention and/or management of disorders associated with aberrant expression and/or activity of EphA2. Such disorders include, but are not limited to, cancer, non-cancer hyperproliferative cell disorders, and infections. The invention further relates to vectors comprising polynucleotides encoding the EphA2-BiTEs of the invention, host cells transformed therewith, and their use in the production of said EphA2-BiTEs. The invention also provides compositions, including pharmaceutical compositions, comprising any of the aforementioned EphA2-BiTEs, polynucleotides or vectors either alone or in combination with one or more prophylactic or therapeutic agents. Also disclosed are methods of screening for said EphA2-BiTEs and kits comprising any of the aforementioned compositions and diagnostic reagents.

Claims

1. A bispecific single chain antibody comprising:

(a) a first heavy chain variable domain (VH domain) and a first light chain variable domain (VL domain) each from an antibody that immunospecifically binds to CD3, said first VH domain covalently linked to said first VL domain by a first linker of sufficient length such that said first VH domain and said first VL domain fold to form a first binding domain that binds to CD3; and

(b) a second VH domain and a second VL domain from an antibody that immunospecifically binds an epitope of EphA2 exposed on the cell surface, said second VH domain covalently linked to said second VL domain by a second linker of sufficient length such that said second VH domain and said second VL domain fold to form a second binding domain that binds said epitope of EphA2;

wherein said first binding domain and said second binding domain are covalently linked by a third linker of a sufficient length such that said first binding domain and said second binding domain fold independently of each other.

2. The bispecific single chain antibody of claim 1, wherein the first binding domain that immunospecifically binds to CD3 binds to the epsilon (ε

) subunit of CD3.

3. The bispecific single chain antibody of claim 2, wherein the first binding domain specific for the ε

subunit of CD3 is located N-terminally relative to the second binding domain.

4. The bispecific single chain antibody of claim 2, wherein the first binding domain specific for the ε

subunit of CD3 is located C-terminally relative to the second binding domain.

5. The bispecific single chain antibody of claim 2, wherein the first binding domain and the second binding domain are arranged in the order VH_CD3-VL_CD3-VH_EphA2-VL_EphA2.

6. The bispecific single chain antibody of claim 2, wherein the first binding domain that immunospecifically binds to the ε

subunit of CD3 is deimmunized.

7. The bispecific antibody of claim 2, wherein the VH and/or VL domains of the second binding domain are the VH and/or VL domains of EA2, EA3, EA4, EA5, 3F2, 4H5, 2A4, 2E7, 12E2, Eph099B-102.147, Eph099B-208.261, Eph099B-210.248, Eph099B-233.152, Eph1010.530.241, 233 or G5.

8. The bispecific single chain antibody of claim 2, wherein the length of the first, second and third linker sequences comprise at least 5 residues, at least 10 residues, at least 15 residues, at least 20 residues, at least 25 residues or at least 30 residues.

9. The bispecific single chain antibody of claim 2, wherein said first linker between the first heavy chain variable domain and the first light chain variable domain of said first binding domain that binds to the ε

subunit of CD3 comprises the sequence SEQ ID NO;

57.

10. The bispecific single chain antibody of claim 2, wherein said second linker between the second heavy chain variable domain and the second light chain variable domain of said second binding domain that binds to EphA2 comprises the sequence SEQ ID NO:

59.

11. The bispecific single chain antibody of claim 2, wherein the third linker between said first binding domain and said second binding domain comprises the sequence SEQ ID NO:

58.

12. The bispecific single chain antibody of claim 2, wherein the VH and/or VL domains of the first binding domain are from an anti-CD3 antibody that is humanized.

13. The bispecific single chain antibody of claim 2, wherein the VH and/or VL domains of the second binding domain are from an anti-EphA2 antibody that is humanized.

14. The bispecific single chain antibody of claim 2, wherein said first binding domain binds the ε

subunit of CD3 with a lower affinity than said second binding domain binds EphA2.

15. The bispecific single chain antibody of claim 14, wherein the dissociation constant of the first binding domain that binds to ε

subunit of CD3 is 4×

10<sup>−

7</sup> M.

16. The bispecific single chain antibody of claim 14, wherein the dissociation constant of the second binding domain that binds to EphA2 is 1.13×

10<sup>−

7</sup> M.

17. The bispecific single chain antibody of claim 2 which comprises the sequence of SEQ ID NO:

65.

18. A composition comprising the bispecific single chain antibody of, claim 1, and a pharmaceutically acceptable carrier.

19. A method of treating, preventing or managing cancer in which the cancer cells express EphA2 in a subject in need thereof, said method comprising administering to said subject an effective amount of the bispecific single chain antibody of claim 1, and a pharmaceutically acceptable carrier.

24. A method of treating, preventing or managing an infection in a subject in need thereof, said method comprising administering to said subject an effective amount of the bispecific single chain antibody of claim 1, and a pharmaceutically acceptable carrier.

25. The method of claim 24, wherein said infection is an intracellular pathogen infection.

29. A method of treating, preventing or managing a non-cancer hyperproliferative cell disorder, said method comprising administering to said subject an effective amount of the bispecific single chain antibody of claim 1, and a pharmaceutically acceptable carrier.

30. The method of claim 29, wherein said non-cancer hyperproliferative cell disorder is asthma, COPD, lung fibrosis, asbestosis, IPF, DIP, UIP, kidney fibrosis, liver fibrosis, other fibroses, bronchial hyper-responsiveness, psoriasis, seborrheic dermatitis, cystic fibrosis, or a hyperproliferative endothelial cell disorder, such as restenosis, hyperproliferative vascular disease, Behcet'"'"'s Syndrome, atherosclerosis, macular degeneration, or a hyperproliferative fibroblast disorder.

33. The method of claim 19, 24 or 29, wherein said subject is a human.

20-23. -23. (canceled)

26-28. -28. (canceled)

31-32. -32. (canceled)