High Throughput Device for Performing Continuous-Flow Reactions

• US 20080145923A1
• Filed: 02/03/2004
• Published: 06/19/2008
• Est. Priority Date: 02/03/2004
• Status: Abandoned Application

• Current Assignee: Bioneer Corporation, Postech Foundation
• Original Assignee: Bioneer Corporation, Postech Foundation
• Inventors: Park, Nokyoung, Lim, Kwanseop, Hahn, Jong Hoon
• Application Number:
  US10/588,159
• Publication Number:
  US 20080145923A1
• Time in Patent Office: Days
• US Class Current: 435/288.7
• CPC Class Codes: B01L 2300/0838 Capillaries
• CPC Class Codes: B01L 2300/1827 using resistive heater
• CPC Class Codes: B01L 3/5025 for parallel transport of multiple samples
• CPC Class Codes: B01L 7/525 with physical movement of samples between temperature zones

Abstract

A high-throughput device is structured to perform a continuous-flow reaction, e.g., a polymerase chain reaction (PCR) requiring repetitive temperature control in a timely fashion.

Claims

1. A high-throughput device for performing a continuous-flow reaction comprising:

(1) at least two solid heating blocks controlled at different temperatures; and

(2) at least one capillary tube having a first open end for fluid inlet and a second open end for fluid outlet to permit a continuous flow of a fluid from the first open end to the second open end, wherein the capillary tube contacts the heating blocks sequentially or repetitively.

3. The device of claim 1 or 2, wherein the device performs a polymerase chain reaction.

4. The device of claim 1 or 2, wherein the heating blocks are controlled at different temperatures by a heater and a temperature sensor.

5. The device of claim 1 or 2, wherein the heating blocks are made of a heat conductive metal selected from the group consisting of copper, iron, aluminum, brass, gold, silver, and platinum.

7. The device of claim 1 or 2, wherein the capillary tube is made of a material selected from the group consisting of glass, fused silica, polytetrafluoroethylene, and polyethylene.

8. The device of claim 1 or 2, wherein the outer wall of the capillary tube is coated with polyimide or polytetrafluoroethylene.

9. The device of claim 1 or 2, wherein the inner wall of the capillary tube is coated with at least one material selected from the group consisting of trimethylchlorosilane, dimethyldichlorosilane, methyltrichlorosilane, trimethylmethoxysilane, dimethyldimethoxysilane, and methyltrimethoxysilane.

10. The device of claim 1 or 2, wherein the capillary tube is wound on the outer surface of the heating blocks.

11. The device of claim 10, wherein the capillary tube is fit into a helical groove formed on the outer surface of the heating blocks.

12. The device of claim 10, wherein the capillary tube is wound 10 to 50 times.

14. The device of claim 1 or 2, which detects the degree of the reaction in real-time, further comprising:

(a) a fluorescence-inducing apparatus having a light source for inducing fluorescence, a unit for detecting fluorescence, and an optical system for collecting emitted fluorescence to the unit for detecting fluorescence after light irradiation to the capillary tube; and

(b) a scanning unit changing the relative positions of the fluorescence-inducing apparatus and the capillary tube.

15. The device of claim 14, wherein the reaction is a polymerase chain reaction.

17. A high-throughput method of performing a continuous-flow nucleic acid amplification, comprising the steps of:

(a) injecting at least one polymerase chain reaction mixture into the first open end of the capillary tube of claim 1 or 2; and

(b) controlling the flow rate of the polymerase chain reaction mixture at an appropriate speed and collecting a polymerase chain reaction product discharged from the second open end.

18. The method of claim 17, wherein the capillary tube contacts sequentially or repetitively the heating blocks each of whose temperature is set at 95˜

100°

C., 45˜

65°

C., and 65˜

72°

C.

19. The method of claim 17, wherein the capillary tube repetitively contacts the heating blocks 10 to 50 times.

20. The method of claim 17, wherein the polymerase chain reaction mixture comprises MgCl₂, dNTP mixture, at least one primer, at least one thermophilic DNA polymerase, a thermophilic DNA polymerase buffer, and at least one template DNA.

21. The method of claim 20, wherein the primer is a molecular beacon.

22. The method of claim 20, wherein the polymerase chain reaction mixture further comprises at least one intercalating dye that emits fluorescence when intercalated into double-stranded DNA.

23. The method of claim 17, wherein the polymerase chain reaction mixture moves from the first open end to the second open end by a pump.

24. The method of claim 17, wherein the polymerase chain reaction mixture is injected continuously or discontinuously in step (a).

25. The method of claim 24, wherein when polymerase chain reaction mixture is injected discontinuously in different compositions each other, an organic solvent or air is injected between injections.

2. A high-throughput device for performing a continuous-flow reaction comprising:

(1) at least two solid heating blocks controlled at different temperatures;

(2) at least one insulating block contacting the heating blocks and arranged to prevent the heating blocks from contacting each other; and

(3) at least one capillary tube having a first open end for fluid inlet and a second open end for fluid outlet to permit a continuous flow of a fluid from the first open end to the second open end, wherein the capillary tube contacts the heating blocks sequentially or repetitively.

6. The device of claim 2, wherein the insulating block is made of bakelite or an acrylic polymer resin.

13. The device of claim 2, which performs a polymerase chain reaction, comprising:

(1) three solid heating blocks controlled at different temperatures;

(2) an insulating block contacting the heating blocks and arranged to prevent the heating blocks from contacting each other; and

(3) a capillary tube having a first open end for an inlet of a polymerase chain reaction mixture and a second open end for an outlet of the polymerase chain reaction mixture, to permit continuous flow of the polymerase chain reaction mixture from the first open end to the second open end, wherein the capillary tube contacts the three heating blocks sequentially or repetitively.

16. A high-throughput multiplex device for performing continuous-flow reactions, wherein at least two heating block-insulating block assemblies are assembled with at least two temperature-adjustable heating blocks to perform at least two independent reactions, and a capillary tube is wound on each assembly wherein the capillary tube has a first open end for fluid inlet and a second open end for fluid outlet to permit a continuous flow of a fluid from the first open end to the second open end.