Method And Apparatus For Characterizing And Counting Particles, In Particular, Biological Particles

• US 20090218223A1
• Filed: 03/22/2006
• Published: 09/03/2009
• Est. Priority Date: 10/26/2005
• Status: Active Grant

• Current Assignee: Menarini Silicon Biosystems S.P.A
• Original Assignee: Silicon Biosystems, S.p.A.
• Inventors: Medoro, Gianni, Guerrieri, Roberto, Manaresi, Nicolo
• Granted Patent: US 8,679,315 B2
• Time in Patent Office: Days
• US Class Current: 204/547
• CPC Class Codes: C12M 41/36 of biomass, e.g. colony counters or by turbidity measurements electrooptical investigation of individual particles G01N15/14, flow cytometers G01N15/1404
• CPC Class Codes: G01N 27/447 using electrophoresis

Abstract

The present invention relates to a method and an apparatus for the characterization and/or the counting of particles by means of non uniform, time variable force fields and integrated optical or impedance meter sensors. The force fields can be of positive or negative dielectrophoresis, electrophoresis or electro-hydrodynamic motions, characterized by a set of stable equilibrium points for the particles (solid, liquid or gaseous); the same method is suitable for the manipulation of droplets (liquid particles) by exploiting effects known to the international scientific community with the name of Electro-wetting on dielectric. The aim of the present invention is to act on the control of the position of each particle which is present in the sample, for the purpose of displacing such particles in a deterministic or statistical way, in order to detect their presence with the integrated optical or impedance meter sensors and/or characterize their type, for the purpose of counting or manipulating them in an efficient way.

Claims

1. Method for the detection of the presence of particles (BEADS) possibly present in points of stable equilibrium (PEQ) of a force field (F) acting on said particles, generated by an array of electrodes (EL) comprising the steps of:

i. deactivating the force field (F);

ii. measuring, in at least a time interval following to the deactivation and selected as a function of the dynamic of the settling and/or Brownian movements to which the particles with a deactivated field are subjected, the grey level generated by first sensors (PIXEL_IJ) associated with said stable equilibrium points (PEQ) and by second sensors (PIXEL_REF) associated with space regions which can not certainty be occupied by particles because of the current configuration of said force field (F);

iii. reactivating the force field (F);

iv. repeating the steps from i) to iii) a number of times, substantially comparable with the convergence rate to its asymptotic value, of the variance of the values of the grey level measured on said second sensors, assumed as a reference (PIXEL_REF);

v. classifying a point of equilibrium as occupied by particles if, in the considered temporal series of measurements, the standard deviation of the grey level values detected on the first sensors, associated with such point of equilibrium (PEQ), results higher than a pre-fixed threshold (THR).

2. Method according to claim 1, characterized in that said threshold (THR) corresponds with the average value of the grey level values detected on said second sensors (PIXEL_REF) associated with said space regions which can not be occupied by particles, increased by a factor proportional to the standard deviation value of the grey levels detected on said second sensors (PIXEL_REF).

8. Method according to any one of the preceding claims, further including a counting step of the total number of particles of which the presence has been detected, characterized in that said counting step takes place in a way estimated on statistical bases, in the following way:

i. the number (EC_measure) of points of stable equilibrium (PEQ) existing in the field (F) generated by the array of electrodes (EL), which do not contain any particle (BEAD), is measured by the sensors;

ii. the counting (NCELLS) of particles (BEADS) is determined as the ratio of the difference of the logarithm of the number (NCAGES) of points of stable equilibrium (PEQ) to the logarithm of the measured number (EC_measure) of the points of stable equilibrium (PEQ) non containing any particle, and the difference of the logarithm of the number (NCAGES) of points of stable equilibrium (PEQ) to the logarithm of the number (NCAGES−

1) of the points of stable equilibrium (PEQ) less one.

15. Method according to any one of the claims 1 to 11, characterized in that said sensors are optical sensors and said grey level corresponds with the optical power striking on the sensors.

16. Method according to any one of the claims 1 to 11, characterized in that said sensors are impedance meter sensors.

17. Method according to any one of the preceding claims, characterized in that a compensation of the values of the grey levels detected by said sensors (PIXEL_IJ) is carried out using a value normalized to the average detection of reference sensors (PIXEL_REF) associated with space regions which can not certainly be occupied from particles in said current configuration of said force field (F).

18. Method according to any one of the preceding claims, characterized in that said measurement of the grey level takes place by temporarily deactivating said force field (F).

19. Method according to any one of the preceding claims, characterized in that said force field (F) is generally selected from:

positive dielectrophoresis, negative dielectrophoresis, Electrowetting on dielectric, electrohydrodynamic flows, electrophoresis.

3. Method for the detection of the presence of particles (BEADS) possibly existing in points of stable equilibrium (PEQ) of a force field (F) acting on said particles, generated by an array of electrodes (EL), comprising the steps of:

i. measuring the grey level generated by first sensors (PIXEL_STA) associated with said points of stable equilibrium (PEQ), and by reference sensors (PIXEL_REF) associated with space regions which certainly can not be occupied by particles in a first current configuration of said force field (F);

ii) modifying said force field (F) in order to impart it a second current configuration wherein said stable equilibrium points are displaced in correspondence with second sensors (PIXEL_TGT), different from the first sensors;

iii) measuring the grey level generated by the second sensors (PIXEL_TGT) and by reference sensors (PIXEL_REF) associated with space regions which can not certainly be occupied by particles in said second current configuration of said force field (F);

iv) determining the difference (DIFF_IMG) between the grey level values detected to the preceding points i) and iii);

v) repeating the steps i) to iv);

vi) processing differential grey level values in order to classify the points of stable equilibrium (PEQ) occupied by particles and those not occupied.

4. Method according to claim 3, characterized in that such processing includes the steps of determining the absolute value of the differences in grey levels, and classifying as occupied the points of equilibrium associated to sensors for which a variation substantially higher than the average variation of the grey level associated with said reference sensors which can not be occupied by particles in said first and second configurations of the field (F) is detected.

5. Method for the detection of the presence of particles (BEADS) possibly existing in points of stable equilibrium (PEQ) of a force field (F) acting on said particles, generated by an array of electrodes (EL), comprising the steps of:

i. modifying said force field (F) so as to displace said points of stable equilibrium (PEQ) to get said particles (BEADS) pass in correspondence with respective sensors (PIXEL_IJ);

ii. measuring the grey level generated by sensors (PIXEL_IJ) associated with the passage of said different points of stable equilibrium (PEQ), with a frequency substantially higher than the settling time of said particles in the new equilibrium position;

iii. classifying the presence or the absence of particles through the measurement of at least a characteristic parameter of the temporal evolution of the grey level measured by said sensors (PIXEL_IJ).

6. Method according to the preceding claim, characterized in that said characteristic parameter of the temporal evolution of the measurement of the grey levels on said sensors (PIXEL_IJ) comprises the peak to peak amplitude.

7. Method according to the preceding claim, characterized in that the classification takes place through the comparison with a threshold value determined starting from peak to peak measurements of the grey levels on reference sensors which can not be occupied by particles with the configuration of the considered force field (F), increased by a factor proportional to the standard deviation of said peak to peak values of said reference sensors.

9. Method for the characterization of particles (BEADS) existing in points of stable equilibrium (PEQ) of a force field (F) acting on said particles, generated by an array of electrodes (EL), comprising the steps of:

i. modifying said force field (F) so as to displace said points of stable equilibrium (PEQ) by passing said particles (BEADS) in correspondence with respective sensors (PIXEL_IJ);

ii. measuring the grey level generated by sensors (PIXEL IJ) associated with the passage of the different points of stable equilibrium (PEQ) containing particles, with a frequency substantially higher than the settling time of said particles in the new position of equilibrium;

iii. processing characteristic parameters of the temporal evolution of the grey level measurement in order to estimate the nature of said particles.

10. Method according to the preceding claim, characterized in that said parameters of the temporal evolution of the grey level include at least one of the parameters selected from the group consisting of:

i. the delay (td) between the variation of the force field (F) and the first variation of the grey level;

ii. the length (tw) of the transitory variation of the grey level;

iii. the width of the positive peak (Gpp) of the grey level;

iv. the width of the negative peak (Gnp) of the grey level.

11. Method for counting the number of particles (BEADS) of a multiplicity of types (NTP), existing in points of stable equilibrium (PEQ) of a force field (F) acting on said particles and generated by an array of electrodes (EL), through the execution of the following steps:

i. modifying the force field (F) so as to displace said points of stable equilibrium (PEQ) by passing said particles (BEADS) in correspondence with respective sensors (PIXEL_IJ);

ii. measuring the grey level detectable by the sensors (PIXEL_IJ) associated with the passage of the different points of stable equilibrium (PEQ) containing particles, with a frequency substantially higher than the settling time of the particles in the new position of equilibrium;

iii. processing characteristic parameters of the temporal evolution of the grey level measurement associated with each point of stable equilibrium (PEQ) for detecting if the associated cage is empty, if it contains a particle of a type or if it contains more particles;

iv. determining in a numerical way the combination of countings of particles of each type (NCELLSt) which better approximates to the measured value of cages with a single particle of each type (Pt_1_MEAS) and empty cages (EC_MEAS).

12. Method according to the claim 5 or 9 or 11, characterized in that said points of stable equilibrium (PEQ) are displaced such that said particles (BEADS) are passed in correspondence with a plurality of respective sensors (PIXEL_IJ);

and in that said sensors (PIXEL_IJ) are optical sensors and are shielded so as to detect the incident optical power on a portion of space substantially lower than the dimensions of the particles.

13. Method according to one of the claim 5, 9 or 12, characterized in that the course of the variation in the grey level detectable by the sensors (PIXEL_IJ) associated with the transit of said points of stable equilibrium (PEQ) containing particles is controlled, so as to determine the end of the settling transient of said particles in the new equilibrium position and go back from this measurement to the displacement speed of said points of stable equilibrium (PEQ).

14. Method according to the preceding claim, characterized in that at the end of said settling transient, a variation in said force field (F) is produced for causing a new displacement of said points of stable equilibrium (PEQ).

20. Apparatus for the detection and/or characterization of particles (BEADS) comprising:

means for the generation of points of stable equilibrium (PEQ) of a force field (F) acting on said particles, generated by an array of electrodes (EL); and

optical sensors (PIXELS) associated with said electrodes;

characterized in that said optical sensors are made so as to detect the incident optical power on a sensor portion substantially lower than the dimensions of the particles.

21. Apparatus according to the preceding claim, characterized in that it comprises shielding means of said sensors, and openings, in a number of at least one for each sensor, obtained through said shielding means and having pre-fixed dimensions, smaller than those of the particles to be detected/characterized.

23. Apparatus according to one of the claims 20 to 22, characterized in that it includes at least a dichroic filter with a pre-fixed passband arranged so as to shield at least partly said sensors (PIXEL), which are optical sensors.

24. Apparatus according to the preceding claim, characterized in that it comprises a plurality of dicihroic filters, each having a passband selected from a set of different passbands, arranged in a non-superimposed way between them and so as to shield in any case at least partly said sensors (PIXEL).

25. Apparatus according to the claim 23 or 24, characterized in that said at least a dichroic filter is arranged to cover said electrodes (EL) and is equipped with interruption openings placed in correspondence with at least part of each said electrode.

26. Apparatus according to one of the claims 23 to 25, characterized in that it comprises at least a dichroic filter with a pre-fixed passband arranged in correspondence with a cover (LID) defining together with said array of electrodes (EL) a chamber or a micro-chamber suitable for receiving and containing a fluid sample containing said particles.

22. Apparatus for the detection and/or characterization of particles (BEADS) comprising means for the generation of points of stable equilibrium (PEQ) of a force field (F) acting on said particles, generated by an array of electrodes (EL);

and sensors (PIXEL) associated with said electrodes, characterized in that to each electrode (EL) a first sensor (PIXEL_V) for detecting the transit of said particles in a vertical direction, and a second sensor (PIXEL_H) for detecting the transit of said particles in a horizontal direction are associated.