Methods and Kits for Detecting and Quantifying Damage Caused by a Parasite

• US 20100015655A1
• Filed: 07/17/2008
• Published: 01/21/2010
• Est. Priority Date: 07/17/2008
• Status: Abandoned Application

• Current Assignee: Abbott Laboratories
• Original Assignee: Abbott Laboratories
• Inventors: Mattingly, Philip G., Adamczyk, Maciej, Brashear, Roy Jeffrey
• Application Number:
  US12/174,887
• Publication Number:
  US 20100015655A1
• Time in Patent Office: Days
• US Class Current: 435/29
• CPC Class Codes: G01N 2333/445 Plasmodium
• CPC Class Codes: G01N 33/56905 Protozoa
• CPC Class Codes: Y02A 50/30 Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
• CPC Class Codes: Y10T 436/163333 Organic [e.g., chemical warfare agents, insecticides, etc.]
• CPC Class Codes: Y10T 436/173845 Amine and quaternary ammonium

Abstract

The present disclosure relates to assays and kits for detecting and quantifying damage caused by a parasite in a subject and monitoring the progression of parasitic disease in a subject.

Claims

1. A method for detecting damage caused by a parasite in a subject, the method comprising the steps of:

a) determining the concentration of at least one biomarker in a test sample obtained from a subject, wherein the at least one biomarker is selected from the group consisting of;

choline, phosphatidylcholine, lysophosphatidyl choline and phosphocholine; and

b) comparing the concentration of the at least one biomarker determined in step (a) with a predetermined level, wherein if the concentration of the biomarker determined in step (a) is lower then the predetermined level, then the subject is determined not to have experienced damage caused by a parasite and further wherein, if the concentration of the biomarker determined in step (a) is higher then the predetermined level, then the subject is determined to have experienced damage caused by a parasite.

2. The method of claim 1, wherein the parasite is selected from the group consisting of:

Trypanosoma, Plasmodium, Leishmania, and Trichomonas.

3. The method of claim 1, wherein the test sample is whole blood, red blood cells, serum or plasma.

4. The method of claim 1, wherein prior to making the comparison in step (b), the method further comprises the steps of

adding at least one analyte-specific enzyme to the test sample to generate peroxide;

adding at least one chemiluminescent compound to the test sample; and

measuring the light generated from the light signal and detecting the presence of at least one biomarker present in the test sample.

5. The method of claim 4, wherein the chemiluminescent compound is an acridinium compound.

6. The method of claim 5, wherein the method further comprises adding at least one basic solution to the test sample.

7. The method of claim 5, wherein the acridinium compound is an acridinium-9-carboxamide having a structure according to formula I:

wherein R¹ and R² are each independently selected from the group consisting of;

alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen;

alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

8. The method of claim 5, wherein the acridinium compound is an acridinium-9-carboxylate aryl ester having a structure according to formula II:

wherein R¹ is an alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen, alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halogen, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

9. A method for quantifying damage caused by a parasite in a subject, the method comprising the steps of:

a) adding at least one analyte-specific enzyme to a test sample obtained from a subject to generate peroxide;

b) adding at least one chemiluminescent compound to the test sample;

c) measuring the light generated from the chemiluminescent compound and determining the amount of at least one biomarker present in the test sample, wherein the biomarker is selected from the group consisting of;

choline, phosphatidylcholine, lysophosphatidyl choline and phosphocholine; and

d) comparing the amount of the at least one biomarker determined in step (c) with a predetermined level, wherein if the amount of the biomarker determined in step (c) is lower than the predetermined level, then the subject is determined to have a reduced severity of damage by the parasite and further wherein, if the amount of the biomarker determined in step (c) is higher then the predetermined level, then the subject is determined to have an increased severity of damage caused by the parasite.

10. The method of claim 9, wherein the parasite is selected from the group consisting of:

Trypanosoma, Plasmodium, Leishmania, and Trichomonas.

11. The method of claim 9, wherein the test sample is whole blood, red blood cells, serum or plasma.

12. The method of claim 9, wherein the chemiluminescent compound is an acridinium compound.

13. The method of claim 12, wherein the method further comprises adding at least one basic solution to the test sample.

14. The method of claim 12, wherein the acridinium compound is an acridinium-9-carboxamide having a structure according to formula I:

wherein R¹ and R² are each independently selected from the group consisting of;

alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen;

alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

15. The method of claim 12, wherein the acridinium compound is an acridinium-9-carboxylate aryl ester having a structure according to formula II:

wherein R¹ is an alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen, alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halogen, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

16. A method for monitoring progression of damage caused by parasitic disease in a subject, the method comprising the steps of:

a) determining the concentration at least one biomarker in a test sample obtained from a subject, wherein the at least one biomarker is selected from the group consisting of;

choline, phosphatidylcholine, lysophosphatidyl choline and phosphocholine; and

b) comparing the concentration of the at least one biomarker determined in step (a) with a predetermined level, wherein if the concentration of the biomarker determined in step (a) is lower than the predetermined level, then the damage caused by the parasitic disease in the subject is determined not to have progressed or to have improved and further wherein if the concentration of the biomarker determined in step (a) is higher then the predetermined level, then the damage caused by the parasitic disease in the subject is determined not to have progressed.

17. The method of claim 16, wherein the parasite is selected from the group consisting of:

Trypanosoma, Plasmodium, Leishmania, and Trichomonas.

18. The method of claim 16, wherein the test sample is whole blood, red blood cells, serum or plasma.

19. The method of claim 16, wherein prior to making the comparison in step (b), the method further comprises the steps of

adding at least one analyte-specific enzyme to the test sample to generate peroxide;

adding at least one chemiluminescent compound to the test sample; and

measuring the light generated from the light signal and detecting the presence of at least one biomarker present in the test sample.

20. The method of claim 19, wherein the chemiluminescent compound is an acridinium compound.

21. The method of claim 20, wherein the method further comprises adding at least one basic solution to the test sample.

22. The method of claim 20, wherein the acridinium compound is an acridinium-9-carboxamide having a structure according to formula I:

wherein R¹ and R² are each independently selected from the group consisting of;

alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen;

alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

23. The method of claim 20, wherein the acridinium compound is an acridinium-9-carboxylate aryl ester having a structure according to formula II:

wherein R¹ is an alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen, alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halogen, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

24. A kit for use in determining the presence or amount of damage caused by a parasite in a subject, the kit comprising:

a. at least one analyte specific enzyme;

b. at least one chemiluminescent compound; and

c. instructions for detecting the presence or amount of damage caused by a parasite in a test sample.

25. The kit of claim 24, wherein the chemiluminescent compound is an acridinium compound.

26. The kit of claim 25, wherein the kit further comprises at least one basic solution.

27. The kit of claim 25, wherein the acridinium compound is an acridinium-9-carboxamide having a structure according to formula I:

wherein R¹ and R² are each independently selected from the group consisting of;

alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen;

alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

28. The kit of claim 25, wherein the acridinium compound is an acridinium-9-carboxylate aryl ester having a structure according to formula II:

wherein R¹ is an alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen, alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halogen, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

29. The kit of claim 24, wherein the parasite is selected from the group consisting of:

Trypanosoma, Plasmodium, Leishmania, and Trichomonas.

30. A kit for monitoring parasitic disease in a subject, the kit comprising:

a. at least one analyte specific enzyme;

b. at least one chemiluminescent compound; and

c. instructions for monitoring parasitic disease in an individual.

31. The kit of claim 30, wherein the chemiluminescent compound is an acridinium compound.

32. The kit of claim 31, wherein the kit further comprises at least one basic solution.

33. The kit of claim 31, wherein the acridinium compound is an acridinium-9-carboxamide having a structure according to formula I:

wherein R¹ and R² are each independently selected from the group consisting of;

alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen;

alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

34. The kit of claim 31, wherein the acridinium compound is an acridinium-9-carboxylate aryl ester having a structure according to formula II:

wherein R¹ is an alkyl, alkenyl, alkynyl, aryl or aralkyl, sulfoalkyl, carboxyalkyl and oxoalkyl; and

wherein R³ through R¹⁵ are each independently selected from the group consisting of;

hydrogen, alkyl, alkenyl, alkynyl, aryl or aralkyl, amino, amido, acyl, alkoxyl, hydroxyl, carboxyl, halogen, halide, nitro, cyano, sulfo, sulfoalkyl, carboxyalkyl and oxoalkyl; and

optionally, if present, X^⊖

is an anion.

35. The kit of claim 30, wherein the parasitic disease is selected from the group consisting of:

Chagas'"'"' disease, African sleeping sickness, nagana, malaria, Leishmaniasis and sexually transmitted disease.