Oligoribonucleotides and Methods of use Thereof for Treatment of Cardiovascular Disease

• US 20100035963A1
• Filed: 09/06/2006
• Published: 02/11/2010
• Est. Priority Date: 09/09/2005
• Status: Abandoned Application

• Current Assignee: Quark Pharmaceuticals, Inc
• Original Assignee: Quark Pharmaceuticals, Inc
• Inventors: Pinner, Elhanan, Chajut, Ayelet
• Application Number:
  US11/991,881
• Publication Number:
  US 20100035963A1
• Time in Patent Office: Days
• US Class Current: 514/44.A
• CPC Class Codes: A61K 48/00 Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
• CPC Class Codes: A61P 7/02 Antithrombotic agents; Anticoagulants; Platelet aggregation inhibitors
• CPC Class Codes: A61P 9/00 Drugs for disorders of the cardiovascular system
• CPC Class Codes: A61P 9/06 Antiarrhythmics
• CPC Class Codes: A61P 9/10 for treating ischaemic or atherosclerotic diseases, e.g. antianginal drugs, coronary vasodilators, drugs for myocardial infarction, retinopathy, cerebrovascula insufficiency, renal arteriosclerosis
• CPC Class Codes: C07H 21/00 Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
• CPC Class Codes: C07H 21/02 with ribosyl as saccharide radical
• CPC Class Codes: C12N 15/113 Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing when used in plants C12N15/8218
• CPC Class Codes: C12N 15/1137 against enzymes viral enzymes C12N15/1131; receptors C12N15/1138
• CPC Class Codes: C12N 2310/111 spanning the whole gene, or a large part of it
• CPC Class Codes: C12N 2310/14 interfering N.A.
• CPC Class Codes: C12N 2310/53 partially self-complementary or closed

Abstract

The invention relates to a double-stranded compound, preferably an oligoribonucleotide, which down-regulates the expression of one or more cardiovascular-related gene. The invention also relates to a pharmaceutical composition comprising the compound, or a vector capable of expressing the oligoribonucleotide compound, and a pharmaceutically acceptable carrier. The present invention also contemplates a method of treating a patient suffering from a cardiovascular disorder or other diseases comprising administering to the patient the pharmaceutical composition in a therapeutically effective dose so as to thereby treat the patient.

Claims

1. A compound having the structure:

5′

(N)_x-Z 3′

(antisense strand)

3′

Z′

-(N′

)_y 5′

(sense strand)

wherein each N and N′

is a ribonucleotide which may be modified or unmodified in its sugar residue and (N)_x and (N′

)_y is an oligomer in which each consecutive N or N′

is joined to the next N or N′

by a covalent bond;

wherein each of x and y is an integer between 19 and 40;

wherein each of Z and Z′

may be present or absent, but if present is dTdT and is covalently attached at the 3′

terminus of the strand in which it is present;

and wherein the sequence of (N)_x comprises an antisense sequence set forth in any of SEQ ID NOS;

40-78.

3. The compound of claim 1, wherein the covalent bond is a phosphodiester bond.

4. The compound of claim 1, wherein x=y=19.

5. The compound of claim 1, wherein Z and Z′

are both absent.

6. The compound of claim 1, wherein one of Z or Z′

is present.

7. The compound of claim 1, wherein all of the ribonucleotides are unmodified in their sugar residues.

8. The compound of claim 1, wherein at least one ribonucleotide is modified in its sugar residue.

9. The compound of claim 8, wherein the modification of the sugar residue comprises a modification at the 2′

position.

10. The compound of claim 9, wherein the modification at the 2′

position results in the presence of a moiety selected from the group consisting of amino, fluoro, alkoxy and alkyl groups.

11. The compound of claim 10, wherein the moiety at the 2′

position is a methoxy (2′

-0-methyl) group.

12. The compound of claim 11, wherein alternating ribonucleotides are modified in both the antisense and the sense strands.

13. The compound of claim 12, wherein the ribonucleotides at the 5′

and 3′

termini of the antisense strand are modified in their sugar residues, and the ribonucleotides at the 5′ and

3′

termini of the sense strand are unmodified in their sugar residues.

14. The compound of claim 13, wherein the antisense and the sense strands are non-phosphorylated at the 3′

and 5′

termini or wherein the antisense and the sense strands are phosphorylated at the 3′

termini.

16. A pharmaceutical composition comprising a compound of claim 1 in an amount effective to inhibit expression of a gene and a pharmaceutically acceptable carrier.

18. A method of treating a patient suffering from a cardiovascular disorder comprising administering to the patient a pharmaceutical composition according to claim 16 in a therapeutically effective dose so as to thereby treat the patient.

27. The method according to claim 18 wherein the cardiovascular disorder is selected from:

myocardial ischemia-associated dysfunction, coronary arteriosclerosis, coronary thrombosis, myocardial infarction, stroke, acute coronary syndrome, unstable angina, arrhythmia, cardiopulmonary arrest, valve disorders and cardiac chest pain.

31. A method of down-regulating the expression of a cardiovascular-related gene by at least 50% as compared to a control comprising contacting an mRNA transcript of the gene with the compound of claim 1.

33. A pharmaceutical composition comprising a compound of claim 13 in an amount effective to inhibit expression of a gene and a pharmaceutically acceptable carrier.

2. (canceled)

15. A vector capable of expressing a compound having the structure:

5′

(N)_x-Z 3′

(antisense strand)

3′

Z′

-(N′

)_y 5′

(sense strand)

wherein each N and N′

is a ribonucleotide which may be modified or unmodified in its sugar residue and (N)_x and (N′

)_y is an oligomer in which each consecutive N or N′

is joined to the next N or N′

by a covalent bond;

wherein each of x and y is an integer between 19 and 40;

wherein each of Z and Z′

may be present or absent, but if present is dTdT and is covalently attached at the 3′

terminus of the strand in which it is present;

and wherein the sequence of (N)_x comprises an antisense sequence set forth in any of SEQ ID NOS;

40-78.

17. (canceled)

19-26. -26. (canceled)

28-30. -30. (canceled)

32. (canceled)