Use of the conserved Drosophila NPFR1 system for uncovering interacting genes and pathways important in nociception and stress response

• US 20100119454A1
• Filed: 11/03/2009
• Published: 05/13/2010
• Est. Priority Date: 11/03/2008
• Status: Abandoned Application

• Current Assignee: The University of Georgia Research Foundation, Inc.
• Original Assignee: The University of Georgia Research Foundation, Inc.
• Inventors: Xu, Jie, Shen, Ping, Li, Mo
• Application Number:
  US12/590,159
• Publication Number:
  US 20100119454A1
• Time in Patent Office: Days
• US Class Current: 424/9.200
• CPC Class Codes: A01K 2217/058 due to expression of inhibitory nucleic acid, e.g. siRNA, antisense
• CPC Class Codes: A01K 2217/072 maintaining or altering function, i.e. knock in
• CPC Class Codes: A01K 2227/706 Insects, e.g. Drosophila melanogaster, medfly
• CPC Class Codes: A01K 2267/03 Animal model, e.g. for test or diseases
• CPC Class Codes: A01K 67/0339 Genetically modified insects, e.g. Drosophila melanogaster, medfly
• CPC Class Codes: A61K 49/0008 Screening agents using (non-human) animal models or transgenic animal models or chimeric hosts, e.g. Alzheimer disease animal model, transgenic model for heart failure
• CPC Class Codes: C07K 14/43581 from Drosophila
• CPC Class Codes: C07K 14/705 Receptors; Cell surface antigens; Cell surface determinants tumour specific antigens C07K14/4748
• CPC Class Codes: G01N 33/5017 for testing neoplastic activity
• CPC Class Codes: G01N 33/5085 of invertebrates

Abstract

The present disclosure provides methods of identifying compositions capable of inhibiting responses to stressors in an organism, as well as recombinant cells and organisms useful in identifying compositions capable of inhibiting responses to stressors in an organism.

Claims

1. A method of identifying a composition capable of inhibiting a response to a stressor, comprising:

exposing a Drosophila melanogaster organism to a medium comprising a compound that elicits an avoidance response in a wild-type Drosophila organism, wherein the Drosophila organism exhibits an avoidance response to the medium; and

contacting the Drosophila organism with a test compound, wherein a reduction in the avoidance response to the medium in the presence of the test compound as compared to in the absence of the test compound indicates that the test compound modulates response to a stressor in a higher organism.

2. The method of claim 1, wherein the Drosophila organism over-expresses a neuropeptide receptor NPF1.

3. The method of claim 1, wherein the test compound interacts with a Drosophila NPFR1 polypeptide to inhibit activity of a TPRA ion-channel polypeptide.

4. The method of claim 1, wherein the test compound mimics or modulates the activity of a Drosophila neuropeptide F (NPF), and wherein the compound is not Drosophila NPF.

5. The method of claim 1, wherein the Drosophila organism is a post-feeding larval form of Drosophila, and wherein the compound in the medium that elicits an avoidance response is a sugar.

6. The method of claim 5, wherein the sugar is fructose.

7. The method of claim 1, wherein the Drosophila organism is an adult fly, and wherein the compound in the medium that elicits an avoidance response is isothiocyanate.

8. A method of identifying a composition capable of modulating a response to a stressor, comprising:

providing a recombinant Drosophila melanogaster organism comprising a heterologous transient receptor potential (TRP) ion-channel polypeptide from a different organism, wherein the TRP ion-channel polypeptide is responsive to a stressor;

exposing the larva to the stressor, wherein the Drosophila larva exhibits an avoidance response to the stressor; and

contacting the larva with a test compound, wherein a reduction in the avoidance response to the stressor in the presence of the test compound as compared to in the absence of the test compound indicates that the test compound modulates response to a stressor in a higher organism.

9. The method of claim 8, wherein the TRP ion-channel polypeptide is a rat TRPV1 comprising SEQ. ID NO:

7.

10. The method of claim 9, wherein the stressor is capsaicin.

11. A recombinant Drosophila melanogaster organism comprising:

a heterologous transient receptor potential (TRP) ion-channel polypeptide from a different organism, wherein the TRP ion-channel polypeptide is responsive to a stressor.

12. The recombinant Drosophila melanogaster organism of claim 11, wherein the TRP ion-channel polypeptide is a rat TRPV1 and the stressor is capsaicin.

13. A method of identifying a composition capable of inhibiting a response to a stressor, comprising:

providing a recombinant Drosophila melanogaster organism comprising neurons comprising a nucleic acid encoding for a transient receptor potential (TRP) ion-channel polypeptide that is responsive to a stressor, wherein the neurons further comprise a heterologous nucleic acid encoding a neuropeptide family receptor;

exposing the organism to the stressor and observing the organism'"'"'s response to the stressor;

exposing the organism to the stressor in the presence of a test compound; and

observing the organism'"'"'s response to the stressor, wherein a change in the organism'"'"'s response to the stressor in the presence of the test compound as compared to the response in the absence of the test compound indicates that the test compound modulates the response to the stressor.

14. The method of claim 13, wherein the TRP ion-channel polypeptide is a Drosophila TRPA peptide sensitive to noxious heat stimulus, and wherein the stressor is a heat probe.

15. The method of claim 13, wherein the neuropeptide family receptor comprises a neuropeptide receptor from Drosophila.

16. The method of claim 15, wherein the neuropeptide family receptor comprises NPFR1.

17. A recombinant Drosophila melanogaster organism comprising a neural cell comprising:

a nucleic acid encoding for a transient receptor potential (TRP) ion-channel polypeptide that is responsive to a particular stressor, and

a heterologous nucleic acid encoding a neuropeptide family receptor that is not present in the neural cell of a wild-type Drosophila organism.

18. A method of identifying a composition capable of reducing a cellular response to a stressor, comprising:

exposing a first population of cells to a stressor, wherein the cells comprise a heterologous nucleic acid encoding a transient receptor potential (TRP) ion-channel polypeptide and a heterologous nucleic acid encoding a neuropeptide receptor, and a fluorescent compound capable of intracellularly fluorescing in the presence of calcium, wherein the TRP ion-channel polypeptide transports calcium into the cell in response to a stressor;

delivering to a second population of cells a stressor, wherein the cells comprise the heterologous nucleic acid encoding the TRP ion-channel polypeptide, and the heterologous nucleic acid encoding the neuropeptide receptor, the fluorescent compound is capable of intracellularly fluorescing in the presence of calcium, and a test compound; and

determining the difference in the level fluorescence of the first and second cell populations, wherein if the level of fluorescence in the first cell population is greater than in the second cell population, the test compound inhibits the uptake of calcium via the transient receptor potential ion-channel polypeptide.

19. The method of claim 18, wherein the TRP ion-channel polypeptide is Drosophila TRPA.

20. The method of claim 19, wherein the Drosophila TRPA comprises SEQ ID NO:

1.

21. The method of claim 18, wherein, wherein the TRP ion-channel polypeptide is rat TRPV1.

22. The method of claim 21, wherein the rat TRPV1 comprises SEQ ID NO:

7.

23. The method of claim 18, wherein the neuropeptide Y family receptor comprises Drosophila neuropeptide receptor F1 (NPFR1).

24. The method of claim 23, wherein the NPFR1 peptide comprises SEQ ID NO:

3.

25. The method of claim 18, wherein the neuropeptide receptor is a neuropeptide Y family receptor and wherein the test compound interacts with the neuropeptide Y family receptor to inhibit activity of the TPP ion-channel polypeptide.

26. The method of claim 18, wherein the test compound interacts with a Drosophila NPFR1 polypeptide to inhibit activity of a TPRA ion-channel polypeptide.

27. The method of claim 26, wherein the test compound mimics or modulates the activity of a Drosophila neuropeptide F (NPF), and wherein the compound is not Drosophila NPF.

28. A method of identifying a composition capable of reducing a cellular response to a stressor, comprising:

exposing a first population of cells to a stressor, wherein the cells comprise a heterologous nucleic acid encoding a transient receptor potential (TRP) ion-channel polypeptide and a heterologous nucleic acid encoding a neuropeptide receptor, and wherein the cells are in contact with a medium comprising a neuropeptide capable of selectively binding to the neuropeptide receptor, and a fluorescent compound capable of intracellularly fluorescing in the presence of calcium, wherein the TRP ion-channel polypeptide transports calcium into the cell in response to a stressor;

delivering to a second population of cells a stressor, wherein the cells comprise the heterologous nucleic acid encoding the TRP ion-channel polypeptide, and the heterologous nucleic acid encoding the neuropeptide receptor, and wherein the cells are in contact with a medium comprising the neuropeptide capable of selectively binding to the neuropeptide receptor, the fluorescent compound is capable of intracellularly fluorescing in the presence of calcium, and a test compound; and

determining the difference in the level fluorescence of the first and second cell populations, wherein if the level of fluorescence in the first cell population is greater than in the second cell population, the test compound inhibits the uptake of calcium via the transient receptor potential ion-channel polypeptide.

29. The method of claim 28, wherein the TRP ion-channel polypeptide is Drosophila TRPA.

30. The method of claim 29, wherein the Drosophila TRPA comprises SEQ ID NO:

1.

31. The method of claim 28, wherein, wherein the TRP ion-channel polypeptide is rat TRPV1.

32. The method of claim 31, wherein the rat TRPV1 comprises SEQ ID NO:

7.

33. The method of claim 28, wherein the neuropeptide Y family receptor comprises Drosophila neuropeptide receptor F1 (NPFR1).

34. The method of claim 33, wherein the NPFR1 peptide comprises SEQ ID NO:

3.

35. The method of claim 28, wherein the neuropeptide comprises a neuropeptide Y family member

36. The method of claim 28, wherein the neuropeptide comprises neuropeptide F (NPF) from Drosophila melanogaster.

37. The method of claim 36, wherein the NPF comprises SEQ ID NO:

5.

38. A recombinant eukaryotic cell comprising:

a heterologous nucleic acid encoding a transient receptor potential (TRP) ion-channel polypeptide, and a heterologous nucleic acid encoding a neuropeptide Y family receptor.

39. The cell of claim 38, wherein the TRP ion-channel polypeptide is Drosophila TRPA.

40. The cell of claim 39, wherein the Drosophila TRPA comprises SEQ ID NO:

1.

41. The cell of claim 38, wherein the TRP ion-channel polypeptide is rat TRPV1.

42. The cell of claim 41, wherein the rat TRPV1 comprises SEQ ID NO:

7

43. The cell of claim 38, wherein the neuropeptide Y family receptor comprises Drosophila neuropeptide receptor F1 (NPFR1).

44. The cell of claim 43, wherein the NPFR1 peptide comprises SEQ ID NO:

3

45. The cell of claim 38, wherein the neuropeptide Y family receptor interacts with a neuropeptide Y family member

46. The cell of claim 45, wherein the neuropeptide comprises neuropeptide F (NPF) from Drosophila melanogaster.