Heterocyclic Cyclopamine Analogs and Methods of Use Thereof
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Abstract
The present invention relates to steroidal alkaloids that can be used in the treatment of hedgehog pathway related disorders, particularly cancer.
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Citations
66 Claims
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1-26. -26. (canceled)
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27. A method of treating cancer comprising administering to a subject in need thereof a therapeutically effective amount of a compound of Formula 1a or 1b:
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or a tautomer or pharmaceutically acceptable salt thereof, wherein; R1 is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, hydroxyl, aralkyl, heteroaryl, heteroaralkyl, haloalkyl, —
SR20, —
OR20, —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
[(W)—
C(O)]pR20, —
[(W)—
C(O)O]pR20, —
[(W))—
OC(O)]pR20, —
[(W)—
SO2]pR20, —
[(W)—
N(R20)SO2]pR20, —
[(W)—
C(O)N(R20)]pR20, —
[(W)—
O]pR20, —
[(W)—
N(R20)]pR20, or —
[(W)—
S]pR20;each of R2, R6 and R9 is independently H, alkyl, alkenyl, alkynyl, cycloalkyl, heterocycloalkyl, aryl, aralkyl, heteroaryl, heteroaralkyl, nitrile, alkoxyl, aryloxy, acyloxy, halide, hydroxyl, amino, alkylamino, arylamino, acylamino, aralkylamino, alkylseleno, aralkylseleno, arylseleno, alkylthio, aralkylthio, or arylthio; R3 is H;
or R2 and R3 taken together form a bond;each of R4 and R5 independently is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, nitrile, aralkyl, alkoxyl, aryloxy, acyloxy, halide, sulfhydryl, alkylthio, arylthio, aralkylthio, hydroxyl, amino, alkylamino, arylamino, acylamino, aralkylamino, heteroaryl, or heteroaralkyl;
or R4 and R5 taken together form ═
O, ═
S, ═
N(R20), ═
N—
OR20, or ═
N(N(R20)2);each of R7 and R8 independently is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, or aralkyl;
or R6 and R7 taken together form a bond;
or R8 and R9 taken together form a bond;each of R10 and R11 independently is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, or aralkyl;
or R9 and R10 taken together form a bond;
or R10 and R11 taken together form a bond;R20 independently for each occurrence is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, aralkyl, heteroaryl, heteroaralkyl, or —
[C(R)2]q—
R21;
or any two occurrences of R20 can be taken together to form a 4-8 membered optionally substituted ring which contains 0-3 heteroatoms selected from N, O, S, and P;R21 independently for each occurrence is H, cycloalkyl, aryl, heteroaryl, heterocyclyl;
alkoxyl, aryloxy, acyloxy, halide, sulfhydryl, alkylthio, arylthio, aralkylthio, hydroxyl, amino, acylamino, amido, or carbonyl-containing group;R22 independently for each occurrence is H, halide, ester, amide, or nitrile; R23 independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, heteroaralkyl, perhaloalkyl, halide, nitro, nitrile, ═
O, —
SR20, —
OR20, —
N(R20), —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20), —
N(R20)C(O)R20, —
N(R20)C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
N(R20)S(O)2R20, or —
[C(R)2]q—
R21;R24 independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, heteroaralkyl, perhaloalkyl, halide, nitro, nitrile, —
SR20, —
OR20, —
N(R20)(R20), —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
N(R20)C(O)R20, —
N(R20)C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
N(R20)S(O)2R20, or —
[C(R20)2]q—
R21;p is 0, 1, 2, 3, 4, 5, or 6; q is 0, 1, 2, 3, 4, 5, or 6; R independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, or heteroarylalkyl; -T1-T2-T3- is Y-B-A, B-Y-A, or A-B-Y; each of A and B independently is N, S or C(R23); W is a diradical; X is a bond or —
C(R22)2—
;Y is —
O—
, —
S—
, or —
N(R24)—
;and each alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, aralkyl, heteroaryl, heteroaralkyl, whether alone or part of another group, is optionally substituted. - View Dependent Claims (28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64)
or a tautomer or pharmaceutically acceptable salt thereof, wherein; R1 is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, hydroxyl, aralkyl, heteroaryl, heteroaralkyl, haloalkyl, —
SR20, —
OR20, —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
S/(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
[(W)—
C(O)]pR20, —
[(W)—
C(O)O]pR20, —
[(W)—
OC(O)]pR20, —
[(W)—
SO2]pR20, —
[(W)—
N(R20)SO2]pR20, —
[(W)—
C(O)N(R20)]pR20, —
[(W)—
O]pR20, —
[(W)—
N(R20)]pR20, or —
[(W)—
S]pR20;each of R4 and R5 independently is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, nitrile, aralkyl, alkoxyl, aryloxy, acyloxy, halide, sulthydryl, alkylthio, arylthio, aralkylthio, hydroxyl, amino, alkylamino, arylamino, acylamino, aralkylamino, heteroaryl, or heteroaralkyl;
or R4 and R5 taken together form ═
O, ═
S, ═
N(R20), ═
N—
OR20, or ═
N(N(R20)2);R20 independently for each occurrence is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, aralkyl, heteroaryl, heteroaralkyl, or —
[C(R)2]q—
R21;
or any two occurrences of R20 can be taken together to form a 4-8 membered optionally substituted ring which contains 0-3 heteroatoms selected from N, O, S, and P;R21 independently for each occurrence is H, cycloalkyl, aryl, heteroaryl, heterocyclyl;
alkoxyl, aryloxy, acyloxy, halide, sulfhydryl, alkylthio, arylthio, aralkylthio, hydroxyl, amino, acylamino, amido, or carbonyl-containing group;R22 independently for each occurrence is H, halide, ester, amide, or nitrile; R23 independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, heteroaralkyl, perhaloalkyl, halide, nitro, nitrile, ═
O, —
SR20, —
OR20, —
N(R20)(R20), —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
N(R20)C(O)R20, —
N(R20)C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20 ), —
N(R20)S(O)2R20, or —
[C(R)2]q—
R21;R24 independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, heteroaralkyl, perhaloalkyl, halide, nitro, nitrile, —
SR20, —
OR20, —
N(R20)(R20), —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
N(R20)C(O)R20, —
N(R20)C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
N(R20)S(O)2R20, or —
[C(R20)2]q—
R21;p is 0, 1, 2, 3, 4, 5, or 6; q is 0, 1, 2, 3, 4, 5, or 6; R independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, or heteroarylalkyl; -T1-T2-T3- is Y-B-A, B-Y-A, or A-B-Y; each of A and B independently is N, S or C(R23); W is a diradical; X is a bond or —
C(R22)2—
;Y is —
O—
, —
S—
, or —
N(R24)—
;and each alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, aralkyl, heteroaryl, heteroaralkyl, whether alone or part of another group, is optionally substituted.
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43. The method according to claim 42, wherein R1 is H, alkyl, hydroxyl, aralkyl, heteroaryl, heteroaralkyl, —
- OR20, —
C(O)R20, —
CO2R20, —
C(O)N(R20)(R20), —
S(O)2R20, —
S(O)2N(R20)(R20), —
[(W)—
C(O)]pR20, —
[(W)—
C(O)O]pR20, —
[(W)—
OC(O)]pR20, —
[(W)—
SO2]pR20, —
[(W)—
N(R20)SO2]pR20, —
[(W)—
C(O)N(R20)]pR20, —
[(W)—
O]pR20, —
[(W)—
N(R20)]pR20, or —
[(W)—
S]pR20.
- OR20, —
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44. The method according to claim 43, wherein R1 is H, alkyl, hydroxyl, —
- C(O)R20, —
CO2R20 or —
S(O)2R20.
- C(O)R20, —
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45. The method according to claim 42, wherein R4 and R5 are each H.
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46. The method according to claim 42, wherein X is a bond or —
- CH2—
.
- CH2—
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47. The method according to claim 46, wherein X is —
- CH2—
.
- CH2—
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48. The method according to claim 42, wherein Y is —
- O—
or —
N(R24)—
.
- O—
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49. The method according to claim 48, wherein Y is —
- N(R24)—
.
- N(R24)—
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50. The method according to claim 42, wherein -T1-T2-T3- is A-B-Y, A is CR23, B is N and Y is NR24;
- or -T1-T2-T3- is B-Y-A, A is N, B is CR23 and Y is NR24.
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51. The method according to claim 42, wherein -T1-T2-T3- is B-Y-A, A is CR23, B is N and Y is NR24;
- or -T1-T2-T3- is B-Y-A, A is N, B is CR23 and Y is 0;
or -T1-T2-T3- is Y-B-A, A is N, B is CR23 and Y is S.
- or -T1-T2-T3- is B-Y-A, A is N, B is CR23 and Y is 0;
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52. The method according to claim 42, wherein R24 is H, alkyl, or —
- S(O)2R20.
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53. The method according to claim 27, wherein the compound of Formula lb is a compound of the Formula 11b:
or a tautomer or pharmaceutically acceptable salt thereof, wherein; R1 is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, hydroxyl, aralkyl, heteroaryl, heteroaralkyl, haloalkyl, —
SR20, —
OR20, —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
[(W)—
C(O)]pR20, —
[(W)—
C(O)O]pR20, —
[(W)—
OC(O)]pR20, —
[(W)—
SO2]pR20, —
[(W)—
N(R20)SO2]pR20, —
[(W)—
C(O)N(R20)]pR20, —
[(W)—
O]pR20, —
[(W)—
N(R20)]pR20, or —
[(W)—
S]pR20;each of R4 and R5 independently is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, nitrile, aralkyl, alkoxyl, aryloxy, acyloxy, halide, sulfhydryl, alkylthio, arylthio, aralkylthio, hydroxyl, amino, alkylamino, arylamino, acylamino, aralkylamino, heteroaryl, or heteroaralkyl;
or R4 and R5 taken together form —
O, ═
S, ═
N(R20), ═
N—
OR20, or ═
N(N(R20)2);R20 independently for each occurrence is H, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, aralkyl, heteroaryl, heteroaralkyl, or —
[C(R)2]—
R21;
or any two occurrences of R20 can be taken together to form a 4-8 membered optionally substituted ring which contains 0-3 heteroatoms selected from N, O, S, and P;R21 independently for each occurrence is H, cycloalkyl, aryl, heteroaryl, heterocyclyl;
alkoxyl, aryloxy, acyloxy, halide, sulfhydryl, alkylthio, arylthio, aralkylthio, hydroxyl, amino, acylamino, amido, or carbonyl-containing group;R22 independently for each occurrence is H, halide, ester, amide, or nitrile; R23 independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, heteroaralkyl, perhaloalkyl, halide, nitro, nitrile, ═
O, —
SR20, —
OR20, —
N(R20)(R20), —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
N(R20)C(O)R20, —
N(R20)C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
N(R20)S(O)2R20, or —
[C(R)2]q—
R21;R24 independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, heteroaralkyl, perhaloalkyl, halide, nitro, nitrile, —
SR20, —
OR20, —
N(R20)(R20), —
C(O)R20, —
CO2R20, —
OC(O)R20, —
C(O)N(R20)(R20), —
N(R20)C(O)R20, —
N(R20)C(O)N(R20)(R20), —
S(O)R20, —
S(O)2R20, —
S(O)2N(R20)(R20), —
N(R20)S(O)2R20, or —
[C(R20)2]q—
R21;p is 0, 1, 2, 3, 4, 5, or 6; q is 0, 1, 2, 3, 4, 5, or 6; R independently for each occurrence is H, alkyl, alkenyl, alkynyl, cycloalkyl, aryl, aralkyl, heteroaryl, or heteroarylalkyl; -TI-T2--T3- is Y-B-A, B-Y-A, or A-B-Y; each of A and B independently is N, S or C(R23); W is a diradical; X is a bond or —
C(R22)2—
;Y is —
O—
, —
S—
, or —
N(R24)—
;and each alkyl, alkenyl, alkynyl, aryl, cycloalkyl, heterocycloalkyl, aralkyl, heteroaryl, heteroaralkyl, whether alone or part of another group, is optionally substituted.
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54. The method according to claim 53, wherein R1 is H, alkyl, hydroxyl, aralkyl, heteroaryl, heteroaralkyl, —
- OR20, —
C(O)R20, —
CO2R20, —
C(O)N(R20)(R20), —
S(O)2R20, —
S(O)2N(R20)(R20), —
[(W)—
C(O)]pR20, —
[(W)—
C(O)]pR20, —
[(W)—
OC(O)]pR20, —
[(W)—
SO2]pR20, —
[(W)—
N(R20)SO2]pR20, —
[(W)—
C(O)N(R20)]pR20, —
[(W)—
O]pR20, '"'"'[(W)—
N(R20)]pR20, or —
[(W)—
S]pR20.
- OR20, —
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55. The method according to claim 54, wherein R1 is H, alkyl, hydroxyl, —
- C(O)R20, —
CO2R20 or —
S(O)2R20.
- C(O)R20, —
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56. The method according to claim 53, wherein R4 and R5 are each H.
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57. The method according to claim 53, wherein X is a bond or —
- CH2—
.
- CH2—
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58. The method according to claim 57, wherein X is —
- CH2—
.
- CH2—
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59. The method according to claim 53, wherein Y is —
- O—
or '"'"'N(R24)—
.
- O—
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60. The method according to claim 59, wherein Y is —
- N(R24)—
.
- N(R24)—
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61. The method according to claim 53, wherein -T1-T2-T3- is A-B-Y, A is CR23, B is N and Y is NR24;
- or -T1-T2-T3- is B-Y-A, A is N, B is CR23 and Y is NR24.
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62. The method according to claim 53, wherein -T1-T2-T3- is B-Y-A, A is CR23, B is N and Y is NR24;
- or -T1-T2-T3- is B-Y-A, A is N, B is CR23 and Y is O;
or -T1-T2-T3- is Y-B-A, A is N, B is CR23 and Y is S.
- or -T1-T2-T3- is B-Y-A, A is N, B is CR23 and Y is O;
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63. The method according to claim 53, wherein R24 is H, alkyl, or —
- S(O)2R20.
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64. The method according to any one of claim 27, 42 or 53, wherein the cancer is selected from lung cancer, medulloblastoma, brain cancer, pancreatic cancer, basal cell carcinoma, breast cancer, prostate cancer, gastrointestinal stromal tumor, colon cancer, colorectal cancer, ovarian cancer, multiple myeloma, acute lymphocytic leukemia, acute myelocytic leukemia, chronic myelocytic leukemia, chronic lymphocytic leukemia, Hodgkin lymphoma, non-Hodgkin lymphoma, myelodysplastic syndrome, polycythemia Vera, Waldenstrom'"'"'s macroglobulinemia, heavy chain disease, fibrosarcoma, myxosarcoma, liposarcoma, chondrosarcoma, osteogenic sarcoma, chordoma, angiosarcoma, endotheliosarcoma, lymphangiosarcoma, lymphangioendotheliosarcoma, synovioma, mesothelioma, Ewing'"'"'s tumor, leiomyosarcoma, rhabdomyosarcoma, squamous cell carcinoma, melanoma, adenocarcinoma, sweat gland carcinoma, sebaceous gland carcinoma, papillary carcinoma, papillary adenocarcinomas, stadenocarcinoma, medullary carcinoma, bronchogenic carcinoma, renal cell carcinoma, hepatoma, bile duct carcinoma, choriocarcinoma, seminoma, embryonal carcinoma, Wilms'"'"' tumor, cervical cancer, uterine cancer, testicular cancer, bladder carcinoma, epithelial carcinoma, glioma, astrocytoma, medulloblastoma, craniopharyngioma, ependymoma, pinealoma, hemangioblastoma, acoustic neuroma, oligodendroglioma, meningioma, neuroblastoma, retinoblastoma, endometrial cancer, follicular lymphoma, diffuse large B-cell lymphoma, mantle cell lymphoma, hepatocellular carcinoma, thyroid cancer, gastric cancer, esophageal cancer, head and neck cancer, small cell cancers, essential thrombocythemia, agnogenic myeloid metaplasia, hypereosinophilic syndrome, systemic mastocytosis, familiar hypereosinophilia, chronic eosinophilic leukemia, thyroid cancer, neuroendocrine cancers, and carcinoid tumors.
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65. A method of treating cancer comprising administering to a subject in need thereof a therapeutically effective amount of a compound selected from the group consisting of:
or a tautomer or a pharmaceutically acceptable salt thereof. - View Dependent Claims (66)
Specification