THERAPEUTIC METHODS AND COMPOSITIONS

• US 20110076272A1
• Filed: 08/20/2010
• Published: 03/31/2011
• Est. Priority Date: 08/21/2009
• Status: Abandoned Application

• Current Assignee: Gilead Biologics, Inc. (Gilead Sciences Inc.)
• Original Assignee: Gilead Biologics, Inc. (Gilead Sciences Inc.)
• Inventors: Van Vlasselaer, Peter, Smith, Victoria
• Application Number:
  US12/860,838
• Publication Number:
  US 20110076272A1
• Time in Patent Office: Days
• US Class Current: 424/133.1
• CPC Class Codes: A61K 2039/505 comprising antibodies
• CPC Class Codes: A61P 35/00 Antineoplastic agents
• CPC Class Codes: A61P 43/00 Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
• CPC Class Codes: C07K 16/40 against enzymes
• CPC Class Codes: C07K 2317/73 Inducing cell death, e.g. apoptosis, necrosis or inhibition of cell proliferation
• CPC Class Codes: C12N 15/1137 against enzymes viral enzymes C12N15/1131; receptors C12N15/1138
• CPC Class Codes: C12N 2310/14 interfering N.A.
• CPC Class Codes: C12N 2310/531 Stem-loop; Hairpin

Abstract

Disclosed herein are methods for modulating the environment of a tumor, by inhibiting the activity of the extracellular enzyme lysyl oxidase-like 2 (LOXL2). The methods disclosed herein are effective in reducing tumor growth, reducing recruitment of cells to the tumor, reducing fibroblast activation, reducing desmoplasia, reducing vasculogenesis, reducing the number of TAFs, reducing growth factor production, inhibiting collagen deposition, and increasing necrosis and pyknosis in the tumor. Exemplary inhibitors of LOXL2 activity are antibodies and siRNAs.

Claims

1. A method for inhibiting fibroblast activation in a tumor environment, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

2. The method of claim 1, wherein the fibroblast activation is mediated by transforming growth factor-beta (TGF-β

) signaling.

3. The method of claim 1, wherein inhibition of LOXL2 activity results in disorganization of the extracellular matrix.

4. The method of claim 3, wherein disorganization of the extracellular matrix results in disruption of the cytoskeleton of cells in the tumor stroma.

5. The method of claim 1, wherein the fibroblasts are tumor-associated fibroblasts (TAFs).

6. The method of claim 1, wherein the fibroblasts are myofibroblasts.

34. The method of any of claims 1, 7, 9, 14, 15, 16, 30, 32 or 33, wherein the activity of LOXL2 is inhibited using an anti-LOXL2 antibody.

35. The method of claim 34, wherein the antibody comprises heavy chain sequences as set forth in SEQ ID NO:

1 and light chain sequences as set forth in SEQ ID NO;

2.

36. The method of claim 34, wherein the antibody is a humanized antibody.

37. The method of claim 36, wherein the antibody comprises heavy chain sequences as set forth in SEQ ID NO:

3 and light chain sequences as set forth in SEQ ID NO;

4.

38. The method of any of claims 1, 7, 9, 14, 15, 16, 30, 32 or 33, wherein the activity of LOXL2 is inhibited using a nucleic acid.

39. The method of claim 38, wherein the nucleic acid is a siRNA.

7. A method for inhibiting desmoplasia in a tumor environment, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

8. The method of claim 7, wherein the tumor is a metastatic tumor.

9. A method for inhibiting vasculogenesis in a tumor environment, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

10. The method of claim 9, wherein vasculogenesis comprises recruitment of vascular cells or vascular cell progenitors to a tumor environment.

11. The method of claim 9, wherein vasculogenesis comprises vascular branching.

12. The method of claim 9, wherein vasculogenesis comprises increase in vessel length.

13. The method of claim 9, wherein vasculogenesis comprises an increase in the number of vessels.

14. A method for reducing the number of tumor-associated fibroblasts (TAFs) in a tumor stroma, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

15. A method for inhibiting collagen deposition in a tumor environment, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

16. A method for modulating a tumor environment, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

17. The method of claim 16, wherein modulation comprises a reduction in desmoplasia.

18. The method of claim 16, wherein modulation comprises a reduction in the number of tumor-associated fibroblasts (TAFs).

19. The method of claim 16, wherein modulation comprises a reduction in the number of myofibroblasts.

20. The method of claim 16, wherein modulation comprises remodeling of the cytoskeleton of a cell.

21. The method of claim 20, wherein the cell is a tumor cell.

22. The method of claim 20, wherein the cell is a fibroblast.

23. The method of claim 20, wherein the cell is an endothelial cell.

24. The method of claim 16, wherein modulation comprises a reduction in tumor vasculature.

25. The method of claim 16, wherein modulation comprises a reduction in collagen production.

26. The method of claim 16, wherein modulation comprises a reduction in fibroblast activation.

27. The method of claim 16, wherein modulation comprises inhibition of recruitment of fibroblasts to the tumor environment.

28. The method of claim 16, wherein modulation comprises a reduction in expression of a gene encoding a stromal component.

29. The method of claim 28, wherein the stromal component is selected from the group consisting of alpha-smooth muscle actin, Type I collagen, vimentin, matrix metalloprotease 9, and fibronectin.

30. A method for modulating the production of growth factors in a tumor environment, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

31. The method of claim 30, wherein the growth factor is selected from the group consisting of vascular endothelial growth factor (VEGF) and stromal cell-derived factor-1 (SDF-1).

32. A method for increasing necrosis in a tumor, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

33. A method for increasing pyknosis in a tumor, the method comprising inhibiting the activity of lysyl oxidase-like 2 (LOXL2).

40. A method for identifying an inhibitor of LOXL2, the method comprising assaying a test molecule for its ability to modulate a tumor environment.

41. The method of claim 40, wherein modulation comprises a reduction in desmoplasia.

42. The method of claim 40, wherein modulation comprises a reduction in the number of tumor-associated fibroblasts (TAFs).

43. The method of claim 40, wherein modulation comprises a reduction in the number of myofibroblasts.

44. The method of claim 40, wherein modulation comprises remodeling of the cytoskeleton of a cell.

45. The method of claim 44, wherein the cell is a tumor cell.

46. The method of claim 44, wherein the cell is a fibroblast.

47. The method of claim 44, wherein the cell is an endothelial cell.

48. The method of claim 40, wherein modulation comprises a reduction in tumor vasculature.

49. The method of claim 48, wherein reduction in tumor vasculature is evidenced by reduction in the levels of CD31 and/or vascular endothelial growth factor (VEGF).

50. The method of claim 40, wherein modulation comprises a reduction in collagen production and/or a reduction in degree of collagen crosslinking.

51. The method of claim 40, wherein modulation comprises a reduction in fibroblast activation.

52. The method of claim 40, wherein modulation comprises inhibition of recruitment of fibroblasts to the tumor environment.

53. The method of claim 40, wherein modulation comprises a reduction in expression of a gene encoding a stromal component.

54. The method of claim 53, wherein the stromal component is selected from the group consisting of alpha-smooth muscle actin, Type I collagen, vimentin, matrix metalloprotease 9, and fibronectin.

55. The method of claim 40, wherein modulation comprises reduction in the levels of stromal cell-derived factor-1 (SDF-1) in the tumor environment.

56. The method of claim 40, wherein modulation comprises an increase in the incidence of necrosis and/or pyknosis in cells of the tumor.

57. The method of claim 40, wherein the test molecule is a small organic molecule with a molecular weight less than 1 kD.

58. The method of claim 40, wherein the test molecule is a polypeptide.

59. The method of claim 58, wherein the polypeptide is an antibody.

60. The method of claim 40, wherein the test molecule is a nucleic acid.

61. The method of claim 60, wherein the nucleic acid is a siRNA.