Dual Fluorescence Assay For Determining Viability Of Parasitic Or Non-Parasitic Worms

• US 20120225019A1
• Filed: 09/13/2010
• Published: 09/06/2012
• Est. Priority Date: 09/16/2009
• Status: Abandoned Application

• Current Assignee: Aberystwyth University
• Original Assignee: Aberystwyth University
• Inventors: Peak, Emily, Hoffmann, Karl Francis
• Application Number:
  US13/496,733
• Publication Number:
  US 20120225019A1
• Time in Patent Office: Days
• US Class Current: 424/9.2
• CPC Class Codes: G01N 2021/6441 with two or more labels
• CPC Class Codes: G01N 2333/43526 from worms
• CPC Class Codes: G01N 33/5085 of invertebrates
• CPC Class Codes: G01N 33/5308 for analytes not provided for elsewhere, e.g. nucleic acids, uric acid, worms, mites

Abstract

A two colour fluorescent assay and a kit are described that permit the determination of live and dead parasitic or non-parasitic worms, for example helminths. The assay permits screening for the effect of one or more agents or an event on the viability of a parasitic or non-parasitic worm. In one example, the assay comprises (a) providing a sample comprising one or more parasitic or non-parasitic worms; (b) contacting the parasitic or non-parasitic worms with a concentration of fluorescein diacetate sufficient to yield detectable green fluorescence in any live parasitic or non-parasitic worms present in the sample and a concentration of propidium iodide sufficient to yield detectable red fluorescence in any dead parasitic or non-parasitic worms present in the sample; and (c) detecting the red and green fluorescence of the parasitic or non-parasitic worms. The assay further comprises contacting the parasitic or non-parasitic worms with one or more test agents, or subjecting the parasitic or non-parasitic worms to an event. The assay allows for a rapid and objective score of parasitic or non-parasitic worm death and survival and enables the performance of high- throughput screens for the identification of potential agents against diseases such as schistosomiasis. Also described are methods and kits for discriminatory analysis of parasitic or non-parasitic worm phenotype and/or metabolics using FTIR analysis.

Claims

1. A method for evaluating the viability of parasitic or non-parasitic worms, for example helminths, comprising

(a) providing a sample comprising one or more parasitic or non-parasitic worms, for example helminths;

(b) contacting the parasitic or non-parasitic worms with a concentration of a first fluorescent dye sufficient to yield a detectable first colour fluorescence in any live parasitic or non-parasitic worms present in the sample and a concentration of a second fluorescent dye sufficient to yield a detectable second colour fluorescence in any dead parasitic or non-parasitic worms present in the sample; and

(c) detecting the first and second fluorescence of the parasitic or non-parasitic worms.

2. A method for screening for the effect of one or more agents or an event on the viability of parasitic or non-parasitic worms, for example helminths, comprising the method according to claim 1, further comprising contacting the parasitic or non-parasitic worms with one or more test agents, or subjecting the parasitic or non-parasitic worms to the event, prior to the step of contacting the parasitic or non-parasitic worms with the fluorescent dyes.

3. A method according to claim 1, wherein the first fluorescent dye is fluorescein diacetate that yields a detectable green fluorescence in any live parasitic or non-parasitic worms present in the sample.

4. A method according to claim 1, wherein the second fluorescent dye is propidium iodide that yields a detectable red fluorescence in any dead parasitic or non-parasitic worms present in the sample.

5. A method according to claim 1, further comprising allowing sufficient time for the two dyes to yield optimal fluorescence.

6. A method according to claim 1, comprising detecting the first fluorescence and the second fluorescence sequentially.

7. A method according to claim 6, comprising detecting the first colour fluorescence before the second colour fluorescence.

8. A method according to claim 1, wherein the first fluorescent dye is fluorescein diacetate and the method comprises detecting the green fluorescence about 4 to about 8 minutes after contact with the sample comprising parasitic or non-parasitic worms.

9. A method according to claim 1, wherein the second fluorescent dye is propidium iodide and the method comprises detecting the red fluorescence about 10 to about 35 minutes after contact with the sample comprising parasitic or non-parasitic worms.

10. A method according to claim 9, comprising detecting the red fluorescence about 14 to about 29 minutes after contact with the sample comprising parasitic or non-parasitic worms.

11. A method according to claim 2, further comprising removing the one or more test agents or the event prior to contacting the parasitic or non-parasitic worms with the fluorescent dyes.

12. A method according to claim 1, further comprising providing the parasitic or non-parasitic worms in a culture media, preferably, wherein the culture media does not contain FCS.

13. A method according to claim 12, comprising removing at least a proportion of the culture media prior to contacting the parasitic or non-parasitic worms with the fluorescent dyes.

14. A method according to claim 12, further comprising adding an esterase inhibitor to the sample comprising the parasitic or non-parasitic worms and culture media prior to contacting the parasitic or non-parasitic worms with the fluorescent dyes in a concentration sufficient to prevent hydrolysis of the first fluorescent dye outside of the parasitic or non-parasitic worm cell membrane.

15. A method according to claim 1, further comprising providing a microtiter plate comprising a plurality of wells, each of the wells containing one or more parasitic or non-parasitic worms.

16. A method according to claim 15, wherein the microtiter plate is selected from the group consisting of a 12-well plate, a 24-well plate, a 96-well plate, a 384-well plate, and a 1536-well plate, preferably, the plate has 96 wells or 384 wells.

17. A method according to claim 15 or claim 16, wherein the wells each contain between 1 and about 15 adult parasitic or non-parasitic worms, preferably between about 5 and about 10.

18. A method according to claim 15 or claim 16, wherein

(i) the microtiter plate has 96 wells each containing between about 100 and about 1000 immature parasitic or non-parasitic worms, preferably between about 500 and about 1000, or

(ii) the microtiter plate has 384 wells each containing between about 50 and about 500 immature parasitic or non-parasitic worms, preferably between about 100 and about 300 immature parasitic or non-parasitic worms.

19. A method according to claim 18, wherein the immature parasitic or non-parasitic worms are schistosomula.

20. A method according to claim 15, wherein the fluorescence is detected by means of a multi-well fluorescent plate reader.

21. A method according to claim 1, wherein the fluorescence is detected by means selected from:

flow cytometry, fluorescent microscopy and fluorescence spectroscopy.

22. A method according to claim 1, wherein the parasitic or non-parasitic worms are helminths, preferably platyhelminthes.

23. A method according to claim 1, wherein the parasitic or non-parasitic worms are nematodes.

24. A method according to claim 1, wherein the parasitic or non-parasitic worms are immature adults.

25. A method according to claim 24, wherein the immature adults are schistosomula or Haemonchus contortus L3 larvae.

26. A method according to claim 1 which comprises contacting the sample comprising one or more parasitic or non-parasitic worms with one or more test agents or subjecting the sample to an event, wherein the method is for detecting phenotypic and/or metabolic changes in a sample of living parasitic or non-parasitic worms and further comprises:

(I) performing FTIR spectral analysis of the sample; and

(II) comparing the spectra produced from the sample with an FTIR spectra from one or more reference standards indicative of abnormal phenotype and/or metabolic change to identify the presence of one or more abnormal phenotypes and/or metabolic changes in the sample.

28. A method according to claim 26, wherein FTIR spectral analysis is performed on the supernatant of the sample comprising one or more parasitic or non-parasitic worms, and/or on worm bodies of the sample comprising one or more parasitic or non-parasitic worms.

27. A method for detecting phenotypic and/or metabolic changes in a sample of living parasitic or non-parasitic worms, for example helminths following contact with one or more test agents or after subjecting the sample to an event, the method comprising

(a) providing a sample comprising one or more parasitic or non-parasitic worms, for example helminths;

(b) contacting the parasitic or non-parasitic worms with one or more test agents or subjecting the sample to an event;

(c) performing FTIR spectral analysis of the sample; and

(d) comparing the spectra produced from the sample with an FTIR spectra from one or more reference standards indicative of abnormal phenotype and/or metabolic change to identify the presence of one or more abnormal phenotypes and/or metabolic changes in the sample.

29. A kit for evaluating the viability of parasitic or non-parasitic worms, for example helminths, the kit comprising:

(i) a microtiter plate comprising a plurality of wells;

(ii) a culture media;

(iii) a first fluorescent dye that yields a detectable first colour fluorescence in any live parasitic or non-parasitic worms; and

(iv) a second fluorescent dye that yields a detectable second colour fluorescence in any dead parasitic or non-parasitic worms.

30. A kit according to claim 29, further comprising a wash medium.

31. A kit according to claim 29, further comprising a positive control anti-helminth agent selected from:

auronofin, ethanol, phenol, iodine, methanol, formaldehyde, dimethyl sulphate, hydrogen peroxide, hydrochloric acid, acetic acid, formic acid and sodium dodedecyl sulphate.

32. A kit according to claim 29, wherein the first fluorescent dye is fluorescein diacetate.

33. A kit according to claim 29, wherein the second fluorescent dye is propidium iodide.

34. A kit according to claim 29, wherein the culture media is lyophilised.

35. A kit according to claim 30, wherein the wash medium is in lyophilised or liquid form.

36. A kit according to claim 29, further comprising a plurality of parasitic or non-parasitic worms, for example helminths.

37. A kit according to claim 36, wherein the plurality of parasitic or non-parasitic worms are disposed such that each of a plurality of the wells contains one or more of the parasitic or non-parasitic worms.

38. A kit according to claim 29, further comprising instructions for use of the kit for high-throughput screening for the effect of one or more test agents or an event on the viability of a parasitic or non-parasitic worm, for example a platyhelminth or nematode.

39. A kit for evaluating phenotypic and/or metabolic changes of parasitic or non-parasitic worms, for example helminths following contact with one or more test agents or after subjecting a sample of parasitic or non-parasitic worms, for example helminths to an event, the kit comprising:

(i) a microtiter plate comprising a plurality of wells;

(ii) a culture media; and

(iii) instructions for performing FTIR analysis.