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NUCLEIC ACID ANALYSIS BY RANDOM MIXTURES OF NON-OVERLAPPING FRAGMENTS

  • US 20130310264A1
  • Filed: 07/30/2013
  • Published: 11/21/2013
  • Est. Priority Date: 06/15/2005
  • Status: Active Grant
First Claim
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1. A method of determining nucleotide sequences of one or more target polynucleotides of an organism without cell-based cloning, the method comprising the steps of:

  • providing a plurality of aliquots, most of which contain a mixture of fragments of the target polynucleotide(s), wherein any given portion of the target polynucleotide(s) is represented by a single non-overlapping fragment in 60% or more of the aliquots containing such portion;

    obtaining sequence reads for fragments from the plurality of aliquots;

    determining the aliquot of origin of the fragment from which a plurality of the sequence reads have been obtained; and

    assembling the sequence reads to produce an assembled sequence.

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