Assay for proline iminopeptidase and other hydrolytic activities

• US 5,571,684 A
• Filed: 01/17/1995
• Issued: 11/05/1996
• Est. Priority Date: 11/07/1994
• Status: Expired due to Term

• Current Assignee: Litmus Concepts, Inc. (Quidel Corporation)
• Original Assignee: Litmus Concepts, Inc. (Quidel Corporation)
• Inventors: Lawrence, Paul J., Andreasen, Terrence J., Shockey, David R.
• Primary Examiner(s): PADEN, CAROLYN A
• Application Number:
  US08/374,487
• Time in Patent Office: 658 Days
• Field of Search: 435/18, 435/24, 435/805, 435/810, 435/34, 422/61
• US Class Current: 435/18
• CPC Class Codes: C12Q 1/34 involving hydrolase
• CPC Class Codes: C12Q 1/37 involving peptidase or proteinase
• CPC Class Codes: C12Q 2334/70 the product, e.g. phenol, naphthol being diazotised in situ, e.g. with Fast Red
• CPC Class Codes: C12Q 2337/30 Naphthyl amides, e.g. beta-NA, 2-NA, 4-methoxy-beta-naphthylamine, i.e. 4MNA
• CPC Class Codes: Y10S 435/805 Test papers
• CPC Class Codes: Y10S 435/81 Packaged device or kit

Abstract

The presence of an enzymatically active hydrolase in a fluid sample is detected by contacting the sample with a solid-phase conjugate which is susceptible to cleavage by the hydrolase, and simultaneously or shortly thereafter, contacting the sample with an indicator which undergoes a detectable change upon the action of a reporter group. The reporter group is part of the conjugate and is liberated from it either partly or entirely by the action of the hydrolase. The indicator is susceptible to action by the reporter group only upon decoupling of the reporter group from the remainder of the conjugate, the decoupling occurring either in part or entirely upon action of the hydrolase. Also provided by this invention are various forms of a dry, self-contained test device which contains the conjugate described above plus the indicator and all other reagents and components necessary to achieve a detectable indication of the presence or absence of a catalytically active hydrolase. Preferred embodiments of the device also contain positive and negative controls.

Claims

1. A method for assaying for the presence or absence of an analyte selected from the group consisting of a catalytically active hydrolase and an inhibitor of a catalytically active hydrolase in a sample, said method comprising:

(a) contacting said sample with a solid-phase conjugate consisting of a reporter group coupled to a substrate residue yet cleavable therefrom by said catalytically active hydrolase, said reporter group when not so coupled being capable of causing a detectable change in an indicator, this step being performed in an environment in which the condition of said reporter group as either coupled or decoupled correlates with the presence or absence of said analyte;

(b) during or subsequent to step (a), contacting said sample with a solid-phase indicator which undergoes a detectable change upon action of said reporter group; and

(c) observing whether said indicator undergoes a detectable change, said detectable change being an indication of the presence or absence of said analyte in said sample.

2. A method in accordance with claim 1 wherein said analyte is a catalytically active hydrolase.

3. A method in accordance with claim 2 wherein said analyte is a member selected from the group consisting of hydrolases acting on ester bonds, hydrolases acting on glycoside bonds, hydrolases acting on ether bonds, hydrolases acting on peptide bonds, hydrolases acting on carbon--nitrogen (C--N) bonds other than peptide bonds, hydrolases acting on carbon--carbon (C--C) bonds, hydrolases acting on acid-anhydride bonds, hydrolases acting on halide bonds and hydrolases acting on phosphorous--nitrogen (P--N) bonds.

4. A method in accordance with claim 3 wherein said hydrolase is a hydrolase acting on peptide bonds selected from the group consisting of α

-amino-acyl-peptide hydrolases, peptidyl-amino-acid hydrolases, dipeptide hydrolases and peptidyl-peptide hydrolases.

5. A method in accordance with claim 4 wherein said hydrolase is one which exhibits proline iminopeptidase activity.

6. A method in accordance with claim 1 wherein said reporter group is a member selected from the group consisting of phenols, naphthols, aromatic amines and amino acids.

7. A method in accordance with claim 1 wherein said substrate residue is a member selected from the group consisting of amino acids, peptides, monosaccharides, disaccharides, nucleotides, carboxylic acids and alcohols.

8. A method in accordance with claim 1 wherein said solid-phase indicator is a visual indicator.

9. A method in accordance with claim 8 wherein said visual indicator is a chromogenic indicator selected from the group consisting of diazonium salts and tetrazonium salts.

10. A method in accordance with claim 9 wherein said chromogenic indicator is a diazonium salt selected from the group consisting of Fast Garnet GBC, Fast Dark Blue G, Fast Red B, Fast Corinth V, Fast Bordeaux and Fast Black K.

11. A method in accordance with claim 8 wherein said visual indicator is a chromogenic indicator consisting of an amino acid oxidase;

a chromogen selected from the group consisting of guaiac, 2,2'"'"'-azino-bis(3-ethyl-benzthiazoline-6-sulfonic acid), tetramethylbenzidine, phenol, 4-aminoantipyrine and 4,5-dihydroxynaphthalene;

a redox catalyst selected from the group consisting of peroxidases, iron protoporphyrin and metal ions; and

oxygen.

12. A method in accordance with claim 1 wherein said solid-phase indicator is immobilized on a solid support.

13. A method in accordance with claim 1 wherein said solid-phase conjugate and said solid-phase indicator are each deposited on a solid support.

14. A method in accordance with claim 1 wherein said solid-phase conjugate and said solid-phase indicator are both deposited on a common surface of a solid support in a preselected geometric pattern.

15. A method in accordance with claim 1 wherein said solid-phase conjugate and said solid-phase indicator are each immobilized on a solid support.

16. A method in accordance with claim 1 wherein (a) further comprises contacting said sample with an interference hydrolase inhibitor selected to inhibit the activity of any hydrolases other than said analyte.

17. A method in accordance with claim 1 wherein said solid-phase conjugate and said solid-phase indicator are immobilized on first and second solid supports, respectively, and said method comprises contacting said sample with said first and second solid-phase supports simultaneously.

18. A method in accordance with claim 1 wherein said analyte is an enzyme exhibiting proline iminopeptidase activity, said solid-phase conjugate is a member selected from the group consisting of L-prolyl-beta-naphthylamide, hydroxy-L-prolyl-beta-naphthylamide and L-prolyl-beta-methoxynaphthylamide, deposited on a first solid support, and said solid-phase indicator is Fast Garnet GBC immobilized on a second solid support.

19. A method in accordance with claim 1 wherein said analyte is an inhibitor of a target hydrolase in a sample, and in which step (a) comprises contacting said sample with said target hydrolase and said solid-phase conjugate.

20. A test device for assaying for the presence of a catalytically active hydrolase in a sample, said test device comprising:

a receptacle defined at least in part by first and second opposing walls having interior-facing surfaces with a gap therebetween, said first wall, said second wall, or both being of light-transmitting material;

a solid-phase conjugate deposited on said interior-facing surface of one of said first and second walls, said conjugate consisting of a reporter group coupled to a substrate residue yet cleavable therefrom upon contact with said catalytically active hydrolase, said reporter group when not so coupled being capable of causing a detectable change in an indicator;

a solid-phase indicator deposited on said interior-facing surface of one of said first and second walls, said indicator being one which undergoes a detectable change upon action of said reporter group; and

an opening in said receptacle for introduction of said sample.

21. A test device in accordance with claim 20 wherein said solid-phase conjugate is deposited on said interior-facing surface of said first wall, and said solid-phase indicator is deposited on said interior-facing surface of said second wall.

22. A test device in accordance with claim 20 wherein said solid-phase indicator is immobilized on said interior-facing surface of one of said first and second walls.

23. A test device in accordance with claim 20 wherein said solid-phase conjugate is immobilized on said interior-facing surface of said first wall, and said solid-phase indicator is immobilized on said interior-facing surface of said second wall.

24. A test device in accordance with claim 20 wherein said solid-phase indicator is immobilized on said interior-facing surface of said first wall and said opening is in said first wall.

25. A test device in accordance with claim 20 further comprising a positive control species contained in a solid layer on a portion of the interior-facing surface of one of said first and second walls, said positive control species selected such that, when contacted by said sample, said positive control species causes said indicator to undergo a detectable change independently of the presence or absence of said catalytically active hydrolase in said sample.

26. A test device in accordance with claim 25 wherein a detectable change in said indicator in said positive control is an indication that said test device has been filled with said sample.

27. A test device in accordance with claim 20 further comprising a negative control species contained in a solid layer on a portion of the interior-facing surface of one of said first and second walls, said negative control species selected such that, when contacted by said sample, said negative control species prevents said indicator from undergoing a detectable change independently of the presence or absence of said catalytically active hydrolase in said sample.

28. A test device in accordance with claim 20 further comprising:

a positive control species contained in a solid layer on a portion of the interior-facing surface of one of said first and second walls, said positive control species selected such that, when contacted by said sample, said positive control species causes said indicator to undergo a detectable change independently of the presence or absence of said catalytically active hydrolase in said sample; and

a negative control species contained in a solid layer on a portion of the interior-facing surface of one of said first and second walls, said negative control species selected such that, when contacted by said sample, said negative control species prevents said indicator from undergoing a detectable change independently of the presence or absence of said catalytically active hydrolase in said sample.

29. A test device in accordance with claim 20 in which said conjugate comprises a reporter group coupled to a substrate residue and cleavable therefrom upon contact with enzymatically active proline iminopeptidase, said test device thereby being adapted for testing for the presence of bacterial vaginosis by assaying for the presence of proline iminopeptidase activity.

30. A test device in accordance with claim 29 wherein said reporter group is selected from the group consisting of phenols, naphthols, aromatic amines and amino acids.

31. A test device in accordance with claim 29 wherein said substrate residue is selected from the group consisting of L-proline and hydroxy-L-proline.

32. A test device in accordance with claim 29 wherein said indicator is a chromogenic indicator selected from the group consisting of diazonium salts and tetrazonium salts.

33. A test device in accordance with claim 29 wherein said indicator is a member selected from the group consisting of an amino acid oxidase, guaiac, 2,2'"'"'-azino-bis(3-ethyl-benzthiazoline-6-sulfonic acid), tetramethylbenzidine, phenol, 4-aminoantipyrine, 4,5-dihydroxynaphthalene, peroxidases, iron protoporphyrin, metal ions, and oxygen.

34. A test device in accordance with claim 20 further comprising a target hydrolase deposited on said interior-facing surface of one of said first and second walls, said target hydrolase being susceptible to inactivation by the presence of an inhibitor, said test device thereby being adapted for testing for the presence of said inhibitor in said sample.

35. A test device for assaying for the presence of an analyte in a sample, said test device comprising:

a penetrable solid support defined at least in part by upper and lower surfaces;

a reagent contained in a solid layer on one of said upper and lower surfaces of said penetrable solid support, said reagent being one which induces a chemical reaction in an indicator when said analyte is present in said sample; and

an indicator contained in a solid layer on the other of said upper and lower surfaces of said penetrable solid support in a manner such that said indicator is separated from said reagent until said sample is added, said indicator being one which undergoes a detectable change upon the occurrence of said chemical reaction.

36. A test device in accordance with claim 35 further comprising a positive control species contained in a solid layer on a portion of one of said upper and lower surfaces of said penetrable solid support, said positive control species selected such that, when contacted by said sample, said positive control species causes said indicator to undergo a detectable change independently of the presence or absence of said analyte in said sample.

37. A test device in accordance with claim 35 further comprising a negative control species contained in a solid layer on a portion of one of said upper and lower surfaces of said penetrable solid support, said negative control species selected such that, when contacted by said sample, said negative control species prevents said indicator from undergoing a detectable change independently of the presence or absence of said analyte in said sample.

38. A test device in accordance with claim 35 further comprising:

a positive control species contained in a solid layer on a portion of one of said upper and lower surfaces of said penetrable solid support, said positive control species selected such that, when contacted by said sample, said positive control species causes said indicator to undergo a detectable change independently of the presence or absence of said analyte in said sample; and

a negative control species contained in a solid layer on a portion of one of said upper and lower surfaces of said penetrable solid support, said negative control species selected such that, when contacted by said sample, said negative control species prevents said indicator from undergoing a detectable change independently of the presence or absence of said analyte in said sample.

39. A test device in accordance with claim 35 wherein said penetrable solid support is contained in a receptacle defined at least in part by first and second opposing walls, said receptacle having an opening for introduction of said sample.

40. A test device in accordance with claim 39 wherein said first and second walls are of a light-transmitting material and said opening is in one of said first and second walls.

41. A test device in accordance with claim 39 wherein said first and second walls are of an opaque material, said opening is in said first wall and said second wall has a transparent zone to permit observation of said detectable change.

42. A test device in accordance with claim 39 further comprising an air-impermeable and light-impermeable support removably adhered to the exterior of said receptacle, sealing said opening.

43. A test device in accordance with claim 35 further comprising an air-impermeable, light-impermeable package receptacle to receive and encase said penetrable solid support such that said penetrable solid support being removable therefrom.

44. A test device in accordance with claim 35 further comprising a diffusion barrier restricting diffusion through said penetrable solid support to a defined path of travel communicating said reagent with said indicator.

45. A test device in accordance with claim 35 in which said reagent is a conjugate comprising a reporter group coupled to a substrate residue yet cleavable therefrom upon contact with a catalytically active hydrolase, said test device thereby being adapted for testing for the presence of said catalytically active hydrolase in a sample.

46. A test device for assaying for the presence of an analyte in a liquid sample, said test device comprising:

a solid support having a surface;

a solid-phase reagent deposited in a first region on said surface, said reagent being one which induces a chemical reaction in an indicator when said analyte is present in said sample;

a solid-phase indicator deposited in a second region on said surface, said second region non-overlapping with said first region, said indicator being one which undergoes a detectable change upon the occurrence of said chemical reaction; and

means for drawing said sample across said surface from said first region to said second region.

47. A test device in accordance with claim 46 in which said solid-phase indicator is immobilized on said surface.

48. A test device in accordance with claim 46 in which said solid-phase reagent comprises a reporter group coupled to a substrate residue and cleavable therefrom upon contact with proline iminopeptidase activity, said test device thereby being adapted for testing for the presence of bacterial vaginosis by assaying for the presence of enzymatically active proline iminopeptidase activity.