Printing molecular library arrays using deprotection agents solely in the vapor phase
First Claim
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1. A method of forming polymers having different monomer sequences on a substrate, said method comprising:
- providing a substrate comprising a linker molecule layer thereon, said linker molecule layer comprising a linker molecule and a protective group;
applying a barrier layer overlying said linker molecule layer, said applying step forming selected exposed regions of said linker molecule layer;
exposing said selected exposed regions of said linker molecule layer to a deprotecting agent solely in a vapor phase, to solely remove the protective group; and
coupling selected monomers to form selected polymers on the substrate.
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Abstract
A method and apparatus for selectively applying a print material onto a substrate for the synthesis of an array of oligonucleotides at selected regions of a substrate. The print material includes a barrier material, a monomer sequence, a nucleoside, a deprotection agent, a carrier material, among other materials. The method and apparatus also relies upon standard DMT based chemistry, and a vapor phase deprotection agent such as solid TCA and the like.
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Citations
24 Claims
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1. A method of forming polymers having different monomer sequences on a substrate, said method comprising:
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providing a substrate comprising a linker molecule layer thereon, said linker molecule layer comprising a linker molecule and a protective group; applying a barrier layer overlying said linker molecule layer, said applying step forming selected exposed regions of said linker molecule layer; exposing said selected exposed regions of said linker molecule layer to a deprotecting agent solely in a vapor phase, to solely remove the protective group; and coupling selected monomers to form selected polymers on the substrate. - View Dependent Claims (2, 3, 4, 5, 6, 23)
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7. A method of deprotecting selected regions of a substrate, said method comprising:
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providing a substrate comprising a layer of linker molecules thereon, each of said linker molecules having a protective group; applying a deprotection agent solely to remove the protective group in a vapor phase to selected regions of said linker molecule layer. - View Dependent Claims (8, 9, 10, 11, 12)
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13. A method of applying a print medium which is solely in a vapor phase in selected regions of a substrate, solely to remove a protective group, said method comprising the steps of:
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providing a partially completed substrate comprising an array of monomers, said partially completed substrate having a top surface; selectively applying a print medium comprising an element selected from a group consisting of a barrier material, a receptor, a deprotection agent, a monomer group, a carrier material, and an activator to selected regions of said substrate top surface. - View Dependent Claims (14, 15, 16, 17, 18, 24)
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19. A method of synthesizing an oligonucleotide comprising the steps of:
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coupling a first portion of said oligonucleotide to said substrate, said first portion of said oligonucleotide comprising a removable protecting group; solely removing said protecting group with a deprotection agent solely in a vapor phase to expose a functional group on said first portion of said oligonucleotide; and covalently bonding a second portion of said oligonucleotide to said first portion of said oligonucleotide. - View Dependent Claims (20, 21, 22)
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Specification