Methods of sensing with fluorescent conjugates of metal-chelating nitrogen heterocycles

• US 5,648,270 A
• Filed: 02/06/1995
• Issued: 07/15/1997
• Est. Priority Date: 02/06/1995
• Status: Expired due to Term

• Current Assignee: Molecular Probes Incorporated (Thermo Fisher Scientific Incorporated)
• Original Assignee: Molecular Probes Incorporated (Thermo Fisher Scientific Incorporated)
• Inventors: Haugland, Richard P., Hoyland, Brian Matthew, Kuhn, Michael A.
• Primary Examiner(s): SNAY, JEFFREY R
• Application Number:
  US08/384,945
• Time in Patent Office: 890 Days
• Field of Search: 436/172, 436/74, 436/79-84
• US Class Current: 436/74
• CPC Class Codes: C09K 11/06 containing organic luminescent materials
• CPC Class Codes: G01N 2800/04 Endocrine or metabolic disorders
• CPC Class Codes: G01N 31/22 using chemical indicators G01N31/02 takes precedence
• CPC Class Codes: G01N 33/84 involving inorganic compounds or pH

Abstract

The present invention describes the use of a family of fluorescent indicators for metal cations. The indicators are fluorophore conjugates of pyridyl-based metal ion chelators. The indicators are very sensitive detection as quantification reagents for a variety of metals, in a variety of oxidation states, even in the presence of high concentrations of Ca²⁺, Na⁺, or K⁺ or other ions, such as is found in seawater, making them highly useful for assaying physiological samples, biological samples, or environmental samples.

Claims

1. A method of determining the presence of target ions in a sample, comprising:

a) adding to said sample, in an amount sufficient to generate a detectable fluorescent response to said target ion, a compound containing a metal binding moiety according to the formula ##STR8## wherein pyridyl ring substituents R¹, R², R³, R⁴, R⁵, R⁶, R⁷, and R⁸ are independently H, C₁ -C₆ alkyl, C₁ -C₆ alkoxy, C₁ -₆ perfluoroalkyl, halogen, CN, sulfonic acid, salt of sulfonic acid, amino, salt of amino, alkylamino having 1-6 carbons, dialkylamino having 2-12 carbons;

carboxy, carboxyalkyl having 2-7 carbons, carboxyalkoxy having 2-7 carbons, carboxyalkylthio having 2-7 carbons, carboxyalkylamino having 2-7 carbons, or a 1-(acyloxy)alkyl ester of any such carboxy, such ester having 2-7 carbons;

or aryl, or heteroaryl;

or -L-F;

or any two adjacent substituents of R¹, R², R³, R⁴, R⁵, R⁶, R⁷, and R⁸, taken in combination, form a fused six-membered aromatic ring, such that no more than one fused ring is bound to each pyridyl ring, and where said fused rings are optionally and independently further substituted by C₁ -C₆ alkyl, C₁ -C₆ alkoxy, C₁ -C₆ perfluoroalkyl, CN, sulfonic acid, salt of sulfonic acid, amino, salt of amino, alkylamino having 1-6 carbons, dialkylamino having 2-12 carbons;

carboxy, carboxyalkyl having 2-7 carbons, carboxyalkoxy having 2-7 carbons, carboxyalkylthio having 2-7 carbons, or a 1(acyloxy)alkyl ester of any such carboxy, such ester having 2-7 carbons;

or -L-F; and

K is a single covalent bond, or

K is --(CR¹¹₂)_a --X_b --(CR¹²₂)_c --,

wherein a, b and c are each 0 or 1, provided that when b=1, a+c must equal 0 or 2;

each R¹¹ and R¹² is optionally and independently H, or C₁ -C₆ alkyl;

X is O, S, NR¹³, or --CR¹⁴ R¹⁵ --, wherein R¹³ is H, C₁ -C₆ alkyl, -L-F, or phenyl that is optionally further substituted by C₁ -C₆ alkyl, C₁ -C₆ alkoxy, NO₂, C₁ -C₆ perfluoroalkyl, halogen, CN, sulfonic acid, salt of sulfonic acid, amino, salt of amino, alkylamino having 1-6 carbons, dialkylamino having 2-12 carbons;

carboxy, carboxyalkyl having 2-7 carbons, carboxyalkoxy, having 2-7 carbons, carboxyalkylthio having 2-7 carbons, or carboxyalkylamino having 2-7 carbons, or a 1-(acyloxy)alkyl ester of any such carboxy, such ester having 2-7 carbons;

or -L-F;

R¹⁴ and R¹⁵ are independently H, C₁ -C₆ alkyl, C₁ -C₆ alkoxy, NO₂, C₁ -C₆ perfluoroalkyl, halogen, CN, sulfonic acid, salt of sulfonic acid, amino, salt of amino, alkylamino having 1-6 carbons, dialkylamino having 2-12 carbons, carboxy, carboxyalkyl having 2-7 carbons, carboxyalkoxy having 2-7 carbons, carboxyalkylthio having 2-7 carbons, carboxyalkylamino having 2-7 carbons, or a 1-(acyloxy)alkyl ester of any such carboxy, such ester having 2-7 carbons;

or -L-F;

or

K is ##STR9## wherein R¹⁶, R¹⁷, and R¹⁸ are independently H, C₁ -C₆ alkyl, C₁ -C₆ alkoxy, NO₂,

C₁ -C₆ perfluoroalkyl, halogen, CN, sulfonic acid, salt of sulfonic acid, amino, salt of amino, alkylamino having 1-6 carbons, dialkylamino having 2-12 carbons;

carboxy, carboxyalkyl having 2-7 carbons, carboxyalkoxy having 2-7 carbons, carboxyalkylthio having 2-7 carbons, carboxyalkylamino having 2-7 carbons, or a 1-(acyloxy)alkyl ester of any such carboxy, such ester having 2-7 carbons;

or aryl, or heteroaryl, or -L-F;

or

K is a formal single bond, and R⁴ and R⁵ when taken in combination are --CR⁹ ═

CR¹⁰ --, forming a phenanthroline moiety, wherein R⁹ and R¹⁰ are independently H, C₁ -C₆ alkyl, C₁ -C₆ alkoxy, C₁ -C₆ perfluoroalkyl, CN, sulfonic acid, salt of sulfonic acid, amino, salt of amino, alkylamino having 1-6 carbons, dialkylamino having 2-12 carbons;

carboxy, carboxyalkyl having 2-7 carbons, carboxyalkoxy having 2-7 carbons, carboxyalkylthio having 2-7 carbons, carboxyalkylamino having 2-7 carbons, or a 1-(acyloxy)alkyl ester of any such carboxy, such ester having 2-7 carbons;

or -L-F; and

the remaining ring substituents R¹, R², R³, R⁶, R⁷, and R⁸ are as defined above;

such that at least one but not more than two substituents on said metal ion-binding moiety is -L-F;

wherein each F is independently a fluorophore that is attached to said metal-binding moiety by L, where each L is independently a single bond or a covalent linkage that is 9 or fewer non-hydrogen atoms in length;

b) illuminating said sample to generate said fluorescence response; and

c) observing said sample with means for detecting said fluorescence response, where the fluorescence response indicates the presence of target ions.

2. A method, as claimed in claim 1, further comprising the step of determining the concentration of said target ions, by comparing said fluorescence response with the fluorescence response obtained with known concentrations of said target ions.

3. A method, as claimed in claim 1, wherein said means for detecting a fluorescence response is a camera, a fluorometer, a fluorescence microscope, a laser scanner, or a flow cytometer.

4. A method, as claimed in claim 1, wherein said sample comprises living cells or biological fluids.

5. A method, as claimed in claim 1, wherein said sample is a soil or water sample, or is obtained from a soil or water sample.

6. A method, as claimed in claim 1, wherein said compound has the formula ##STR10## wherein the substituents R¹, R², R³, R⁴, R⁵, R⁶, R⁷, R⁸, R⁹, and R¹⁰, when present, are independently hydrogen, sulfonic acid, salt of sulfonic acid, amino, salt of amino, carboxy, alkyl having 1-6 carbons, or alkoxy having 1-6 carbons;

provided that no more than three of the substituents R¹, R², R³, R⁴, R⁵, R⁶, R⁷, R⁸, R⁹, R¹⁰ are not hydrogen;

each fluorophore is independently a fluorescein, a rhodol, a rosamine or a rhodamine fluorophore, that is linked to the metal-binding moiety by a covalent linkage that is a single bond, an alkyl linkage, a phenylene linkage, a sulfonamide, a carboxamide, an alkyl amine, or a thiourea.

7. A method, as claimed in claim 1, wherein said compound has the formula ##STR11## and said target ion is one of Ni²⁺, Zn²⁺, and Cu²⁺.

8. A method, as claimed in claim 1, wherein said compound has the formula ##STR12## and said target ion is one of Fe²⁺, Cu²⁺, Cu⁺ and Hg²⁺.

9. A method, as claimed in claim 1, wherein said compound has the formula ##STR13## and said target ion is Ni²⁺.

10. A method, as claimed in claim 1, wherein

each fluorophore is independently a xanthene, a benzimidazole, a phenoxazine, an ethidium, a propidium, an acridine, a carbocyanine, a merocyanine, a coumarin, a pyrene, a chrysene, a stilbene, an anthracene, a naphthalene, a salicylic acid, a benz-2-oxa-1,3-diazole, a dipyrrometheneboron difluoride, or a dibenzopyrrometheneboron difluoride;

each covalent linkage is a single bond, an alkyl linkage, a phenylene linkage, a sulfonamide, a carboxamide, an alkyl amine, or a thiourea linkage that is 9 or fewer non-hydrogen atoms in length;

said detectable fluorescence response is a change in fluorescence emission intensity, fluorescence lifetime, excitation wavelength or emission wavelength;

said compound is present in a concentration of 100 nM to 20 μ

M;

said target ion is present in a concentration of 5 μ

M to 1 mM;

said illuminating step is accomplished using excitation at greater than 360 nm;

and said observing step is accomplished using a fluorometer, fluorescence microscope, a laser scanner, or flow cytometer.

11. A method, as claimed in claim 1, wherein said compound is present as part of a fiber optic probe.

12. A method, as claimed in claim 11, wherein said target ion is Cu⁺, and said additional metal ion is Cu²⁺.

13. A method, as claimed in claim 1, wherein said sample comprises other metal ions that are not the target ions, and the presence of said target ion is determined in the presence of the other metal ions.

14. A method, as claimed in claim 13, wherein the presence of said target ion is determined in the presence of one or more of Ca²⁺, Na⁺, K⁺ or Cl^- ions.

15. A method, as claimed in claim 1, wherein said target ion is selected from the group consisting of Mn²⁺, Fe²⁺, Fe³⁺, Co²⁺, Ni²⁺, Cu²⁺, Cu⁺, Zn²⁺, Al³⁺, Cd²⁺, Ag⁺, Au⁺, Tl⁺, Pd²⁺, Hg²⁺, Hg⁺, Sn²⁺, Pb²⁺, Sr²⁺, Ba²⁺, Mo³⁺, Ga³⁺, In³⁺, La³⁺, Eu³⁺, Tb³⁺, Dy³⁺, Ru³⁺, Sc³⁺, As³⁺, Sb³⁺, Cr³⁺, Bi³⁺, Ce³⁺, Ce⁴⁺, Pd²⁺, Pt²⁺ and Pt⁴⁺.

16. A method, as claimed in claim 15, wherein said target ion is selected from the group consisting of Mn²⁺, Fe²⁺, Fe³⁺, Ni²⁺, Cu²⁺, Cu⁺, Zn²⁺, Cd²⁺, Ag⁺, Au⁺, Hg²⁺, Pb²⁺, Eu³⁺ and Tb³⁺.

17. A method, as claimed in claim 16, wherein said target ion is selected from the group consisting of Fe²⁺, Fe³⁺, Ni²⁺, Cu²⁺, Cu⁺, Hg²⁺, or Pb²⁺.