Homogeneous bioassay using acoustic emission spectroscopy

• US 5,656,428 A
• Filed: 09/08/1994
• Issued: 08/12/1997
• Est. Priority Date: 09/08/1994
• Status: Expired due to Term

• Current Assignee: Virostat, Inc.
• Original Assignee: BiODE, Inc. (Microchip Technology Incorporated)
• Inventors: McAllister, Douglas J., Lec, Ryszard M.
• Primary Examiner(s): Chin, Christopher L.
• Application Number:
  US08/303,212
• Time in Patent Office: 1,069 Days
• Field of Search: 422/127, 435/6, 435/283.1, 435/286.1, 435/287.1, 435/287.2, 436/514, 436/536, 436/807, 204/193, 204/400, 310/311, 310/348, 73/570, 73/587, 73/590, 73/645, 73/646, 73/649, 73/658, 73/659
• US Class Current: 435/6.11
• CPC Class Codes: G01N 33/54373 involving physiochemical end-point determination, e.g. wave-guides, FETS, gratings
• CPC Class Codes: Y10S 436/807 Apparatus included in process claim, e.g. physical support structures

Abstract

A system and method for homogeneous bioassay uses acoustic energy emissions. A measurement cell is designed for binding reactions of mobile biorecognition molecules. The binding reaction contained in the measurement cell is for example a ligand/receptor binding reaction or a complementary nucleic acid binding reaction. A passive acoustic energy transducer is coupled to the measurement cell for detecting acoustic energy generated by the binding reaction of mobile biorecognition molecules. The passive acoustic energy transducer generates a corresponding analog electrical signal. A signal conditioner coupled to the passive acoustic energy transducer filters and amplifies the electrical signal. A signal analyzer determines spectra of the conditioned electrical signal corresponding to characteristic acoustic energy emissions of the binding reaction of mobile biorecognition molecules. The transducer and signal analyzer may be constructed for spectral analysis of a broad band frequency spectrum in the frequency domain or spectral waveform analysis of a narrow band amplitude spectrum in the time domain. The homogeneous bioassay is applicable for example to ligand/receptor binding reactions such as antigen/antibody binding reactions and enzyme/substrate binding reactions and to complementary nucleic acid binding reactions such as DNA/DNA and RNA/DNA binding reactions.

Claims

1. A system for homogeneous bioassay using acoustic energy comprising:

a measurement cell containing a binding reaction of mobile biorecognition molecules, said binding reaction selected from the group consisting of ligand/receptor binding reactions and complementary nucleic acid binding reactions, said complementary nucleic acid binding reactions selected from the group consisting of DNA/DNA, DNA/RNA, RNA/RAN binding reactions, PCR reactions and DNA/protein binding reactions;

a passive acoustic energy transducer coupled to the measurement cell for detecting acoustic energy emissions generated by a binding reaction of mobile biorecognition molecules and generating a corresponding analog electrical signal, said passive acoustic energy transducer comprising a wideband frequency response transducer responsive to a specified broad frequency spectrum of acoustic energy and constructed for peak resonance at an odd multiple 1/2 the wavelength of the center frequency of the specified broad frequency spectrum;

a signal conditioner for filtering and amplifying said electrical signal to provide a conditioned electrical signal;

and a signal analyzer for determining spectra of the conditioned electrical signal corresponding to characteristic acoustic energy emissions of the binding reaction of mobile biorecognition molecules.

2. The homogeneous bioassay system of claim 1 wherein the ligand/receptor binding reactions are selected from the group consisting of antigen/antibody binding reactions, enzyme/substrate binding reactions, lectin/carbohydrate binding reactions, and abzyme/substrate binding reactions.

3. The system of claim 1 comprising an elastic base abutting the transducer on the side of the transducer opposite the measurement cell to enhance bandwidth of the transducer.

4. The system of claim 1 wherein the signal analyzer is a frequency spectrum analyzer for determining frequency spectra in the frequency domain.

5. The system of claim 1 wherein the measurement cell comprises a reaction chamber having the passive acoustic energy transducer coupled to one side of the reaction chamber and an acoustic reflective lens on the opposite side of the reaction chamber for reflecting and focusing acoustic energy generated by a binding reaction of mobile biorecognition molecules onto the transducer.

6. The system of claim 5 wherein the acoustic reflective lens is a parabolic acoustic energy reflector.

7. The system of claim 1 wherein the measurement cell comprises a reaction chamber having the passive acoustic energy transducer coupled to one side of the reaction chamber and acoustic lens on the opposite side of the reaction chamber for reflecting and focusing acoustic energy generated by a binding reaction of mobile biorecognition molecules onto the transducer.

8. The system of claim 1 wherein the measurement cell comprises a flow through reaction chamber having an inlet end with multiple inlets for the reactants and an outlet end for flow through of a binding reaction mixture at a specified flow rate for continuous monitoring.

9. The system of claim 1 comprising a channelized multichannel receiver coupled to the signal conditioner for selecting at least one narrow frequency band.

10. The system of claim 9 wherein the signal analyzer is a time domain correlator determining amplitude spectra in the time domain.

11. The system of claim 1 wherein the passive acoustic energy transducer is coupled to the measurement cell by at least one impedance matching layer.

12. A system for homogeneous bioassay using acoustic energy comprising:

a measurement cell for containing a binding reaction of mobile biorecognition molecules, said binding reaction selected from the group consisting of ligand/receptor binding reactions and complementary nucleic acid binding reactions, said complementary nucleic acid binding reactions selected from the group consisting of DNA/DNA, DNA/RNA, RNA/RNA binding reactions, PCR reactions and DNA/protein binding reactions;

a passive acoustic energy transducer coupled to the measurement cell for detecting acoustic energy emissions generated by a binding reaction of mobile biorecognition molecules and generating a corresponding analog electrical signal, and wherein the acoustic energy transducer comprises a plurality of transducer plates responsive to different frequency bands or channels of acoustic energy for differentiating by channel the characteristic acoustic energy generated by the binding reaction;

a signal conditioner for filtering and amplifying said electrical signal to provide a conditioned electrical signal;

and a signal analyzer for determining spectra of the conditioned electrical signal corresponding to characteristic acoustic energy emissions of the binding reaction of mobile biorecognition molecules.

13. The system of claim 12 wherein the plurality of transducers plates are independently mounted on the measurement cell.

14. The system of claim 12 wherein the plurality of transducer plates comprises a stack of transducer plates mounted on the measurement cell.

15. The system of claim 12 wherein the plurality of transducer plates each comprise a narrow band frequency response transducer responsive to a different narrow frequency spectrum of acoustic energy.

16. The system of claim 15 wherein the signal analyzer is a time domain correlator determining amplitude spectra or amplitude waveform in the time domain.

17. The system of claim 16 wherein the signal conditioner is constructed to select a narrow frequency band of the electrical signal for amplitude spectra analysis in the time domain.

18. The system of claim 15 wherein each narrow band frequency response transducer is constructed for peak resonance at an odd multiple of 1/2 the wavelength of the center frequency of the specified narrow frequency spectrum.

19. The system of claim 12 wherein the measurement cell comprises a binding reaction chamber of multisided polygon cross section, and a plurality of passive acoustic energy transducer plates, each transducer plate facing a respective side of the reaction chamber, each transducer plate being acoustically coupled to the respective side of the reaction chamber by an acoustically transmissive medium, each transducer plate being responsive to a frequency band of acoustic energy generated by a distinct binding reaction of mobile biorecognition molecules.

20. The system of claim 19 wherein the plurality of transducer plates each comprise a narrow band frequency response transducer responsive to a different narrow frequency spectrum of acoustic energy, and wherein each narrow band frequency response transducer is constructed for peak resonance at an odd multiple of 1/2 the wavelength of the center frequency of the specified narrow frequency spectrum.

21. The system of claim 20 wherein the signal analyzer is a time domain correlator determining amplitude spectra in the time domain.

22. The system of claim 19 wherein the measurement cell comprises a three sided reaction chamber of triangular cross section and a plurality of three passive acoustic energy transducer plates.

23. The system of claim 19 wherein each passive acoustic energy transducer plate is curved to improve the sensitivity of the cell.

24. The system of claim 19 wherein said binding reaction chamber has a small volume relative to the volume of the acoustic energy transducer.

25. A method for homogeneous bioassay for an unknown analyte, said method comprising:

reacting in a measurement cell mobile biorecognition molecules in a binding reaction selected from the group consisting of ligand/receptor binding reactions and complementary nucleic acid binding reactions, said complementary nucleic acid binding reactions selected from the group consisting of DNA/DNA reactions, RNA/DNA reactions, RNA/RNA reactions, peptide nucleic acid/DNA reactions, PCR reactions and DNA/protein reactions, wherein said biorecognition molecules correspond to the unknown analyte;

detecting acoustic energy emissions generated by the binding reaction of mobile recognition molecules with a plurality of passive acoustic energy transducer plates responsive to different frequency bands or channels of acoustic energy for differentiating by channel the characteristic acoustic energy generated by the binding reaction and generating a corresponding analog electrical signal;

filtering and amplifying said electric signal; and

analyzing spectra of the electrical signal corresponding to characteristic acoustic energy emissions of the binding reaction of mobile biorecognition molecules to identify the unknown analyte.

26. The method of claim 25 wherein the ligand/receptor binding reactions are selected from the group consisting of antigen/antibody reactions, enzyme/substrate reactions, lectin/carbohydrate reactions, and abzyme/substrate reactions.

27. The method of claim 25 comprising reacting in the measurement cell an antigen with an antibody one of which is known and the other unknown.

28. The method of claim 25 comprising detecting acoustic energy using a wideband frequency response passive acoustic energy transducer responsive to a specified broad frequency spectrum of acoustic energy.

29. The method of claim 28 comprising the step of analyzing the frequency spectra in the frequency domain.

30. The method of claim 25 wherein the plurality of transducer plates each comprise a narrow band frequency response transducer responsive to a narrow frequency spectrum of acoustic energy, and wherein each narrow band frequency response transducer is constructed for peak resonance at an odd multiple of 1/2 the wavelength of the center frequency of the specified narrow frequency spectrum.

31. The method of claim 30 comprising the step of analyzing amplitude spectra in the time domain.

32. The method of claim 25 wherein the measurement cell comprises a reaction chamber having the passive acoustic energy transducer coupled to one side of the reaction chamber and an acoustic reflective lens on the opposite side of the reaction chamber for reflecting and focusing acoustic energy generated by a binding reaction of mobile biorecognition molecules onto the transducer.

33. The method of claim 25 wherein the measurement cell comprises a binding reaction chamber of multisided polygon cross section, and a plurality of passive acoustic energy transducer plates each transducer plate facing a respective side of the reaction chamber, each transducer plate being acoustically coupled to the respective side of the reaction chamber by an acoustically transmissive medium, each transducer plate being responsive to a different frequency band of acoustic energy generated by a binding reaction of mobile biorecognition molecules.

34. The method of claim 33 wherein the measurement cell comprises a three sided reaction chamber of triangular cross section and a plurality of three passive acoustic energy transducer plates.

35. The method of claim 34 comprising filtering the electrical signal, selecting a single frequency band, and analyzing the signal amplitude in the time domain.

36. The method of claim 33 wherein measurement cell comprises a flow through reaction chamber having an inlet end with multiple inlets for the reactants and an outlet end for flow through of a binding reaction mixture at a specified flow rate and continuously monitoring the binding reaction.

37. The method of claim 33 wherein the acoustically transmissive medium comprises at least one impedance matching layer having a thickness of an odd multiple of 1/4 the wavelength of the center frequency of the respective frequency band of the adjacent transducer plate.

38. The method of claim 25 comprising detecting acoustic energy using a narrow band frequency response transducer responsive to a narrow band frequency spectrum.