Method and apparatus for making miniaturized diagnostic arrays

• US 5,658,802 A
• Filed: 09/07/1995
• Issued: 08/19/1997
• Est. Priority Date: 09/07/1995
• Status: Expired due to Term

• Current Assignee: Microfab Technologies, Inc.
• Original Assignee: Microfab Technologies, Inc.
• Inventors: Frederickson, Christopher J., Wallace, David B., Hayes, Donald J.
• Primary Examiner(s): Housel, James C.
• Assistant Examiner(s): PORTNER, VIRGINIA ALLEN
• Application Number:
  US08/524,781
• Time in Patent Office: 712 Days
• Field of Search: 435/317.1, 435/285, 427/2.13, 417/413.2, 436/501, 436/518
• US Class Current: 436/518
• CPC Class Codes: B01J 19/0046 Sequential or parallel reactions, e.g. for the synthesis of polypeptides or polynucleotides; Apparatus and devices for combinatorial chemistry or for making molecular arrays synthesis methods per se C40B50/00
• CPC Class Codes: B01J 2219/00378 Piezoelectric or ink jet dispensers
• CPC Class Codes: B01J 2219/00475 Sheets
• CPC Class Codes: B01J 2219/00513 Essentially linear supports
• CPC Class Codes: B01J 2219/00527 Sheets
• CPC Class Codes: B01J 2219/00529 DNA chips
• CPC Class Codes: B01J 2219/00585 Parallel processes
• CPC Class Codes: B01J 2219/0059 Sequential processes
• CPC Class Codes: B01J 2219/00596 Solid-phase processes
• CPC Class Codes: B01J 2219/00605 the compounds being directly bound or immobilised to solid supports
• CPC Class Codes: B01J 2219/00621 by physical means, e.g. trenches, raised areas
• CPC Class Codes: B01J 2219/00641 the porous medium being continuous, e.g. porous oxide substrates
• CPC Class Codes: B01J 2219/00659 Two-dimensional arrays
• CPC Class Codes: B01J 2219/00675 In-situ synthesis on the substrate
• CPC Class Codes: B01J 2219/00686 Automatic
• CPC Class Codes: B01J 2219/00722 Nucleotides
• CPC Class Codes: B01J 2219/00725 Peptides
• CPC Class Codes: B01L 3/0268 using pulse dispensing or spraying, eg. inkjet type, piezo actuated ejection of droplets from capillaries
• CPC Class Codes: B01L 3/0293 for liquids
• CPC Class Codes: B41J 3/407 for marking on special material
• CPC Class Codes: B82Y 30/00 : Nanotechnology for materials or surface science, e.g. nanocomposites
• CPC Class Codes: C40B 40/06 : Libraries containing nucleotides or polynucleotides, or derivatives thereof
• CPC Class Codes: C40B 40/10 : Libraries containing peptides or polypeptides, or derivatives thereof
• CPC Class Codes: C40B 50/14 : Solid phase synthesis, i.e. wherein one or more library building blocks are bound to a solid support during library creation; Particular methods of cleavage from the solid support
• CPC Class Codes: C40B 60/14 : for creating libraries
• CPC Class Codes: G01N 2035/1041 : Ink-jet like dispensers
• CPC Class Codes: G01N 33/54366 : Apparatus specially adapted for solid-phase testing

Abstract

Arrays of electro-mechanical dispensers are used to form extremely small drops of fluid and locate them precisely on substrate surfaces in miniature arrays. The printed arrays may consist of DNA, immunoassay reagents or the like. A positioning support such as an X-Y table moves the dispensing devices and substrate surfaces relative to each other to locate the drops on the substrates in predetermined patterns. Arrays of probes as dense as one thousand per square centimeter with center-to-center spacing as small as twenty-five micrometers are formed.

Claims

1. A method of forming diagnostic arrays having a number of discrete probes to produce a test strip on a substrate surface suitable for exposure to a sample of unknown substance, comprising the steps of:

(a) positioning a test strip substrate on a controllably movable substrate support;

(b) positioning over the substrate, a first replaceable set of electro-mechanical fluid ejection devices each having an outlet in fixed spatial relationship relative to each other with said outlets oriented toward the surface of the substrate;

(c) placing activator and test probe fluids in respective reservoirs of a first set of reservoirs, each reservoir being in communication with one of the ejection devices in said first replacement set; and

(d) activating the ejection devices in said first replaceable set and moving said test strip substrate relative to said ejection devices to form and position drops of activator fluid from said first set of reservoirs on the test strip substrate surface in a pattern of discrete sites established by the ejection devices in said first replaceable set, and moving said test strip relative to said ejection devices to form and position drops of test probe fluids from said first set of reservoirs on the test strip surface, on said pattern of sites to form a pattern of discrete test probes, wherein each probe is formed from at least one test probe fluid whereby a test strip having a desired pattern of test probes is prepared for use.

2. A method as set forth in claim 1 including the steps of:

(e) replacing said first replaceable set of ejection devices with a second replaceable set of electro-mechanical fluid ejection devices having outlets in fixed spacial relationship relative to each other with said outlets oriented toward the surface of the substrate;

(f) placing a test probe fluid in each of a second set of reservoirs and each reservoir in communication with one of the ejection devices in said second replaceable set; and

(g) activating the ejection devices in said second replaceable set to form and position drops of test probe fluids from said second set of reservoirs on the surface of said substrate to form a test strip having test probes formed from test probe fluid supplied by each of said replaceable sets of ejection devices.

3. A method as set forth in claim 2 wherein at least some of the drops of test probe fluids from said second set of reservoirs are placed on discrete probes formed of test probe fluids from said first set of reservoirs.

4. A method as set forth in claim 2 wherein steps e-g are repeated with at least a third replaceable set of ejection devices and at least a third set of reservoirs.

5. A diagnostic test strip array formed by the process of claim 2.

6. A method as set forth in claim 2 wherein said pattern of discrete probes comprises at least about 400 probes per square centimeter.

7. A method as set forth in claim 2 wherein said pattern of discrete probes comprises at least about 1000 probes per square centimeter.

8. A method of forming diagnostic arrays having a number of discrete test probes on a substrate surface comprising the steps of:

(a) positioning a substrate on a substrate support;

(b) positioning a plurality of electro-mechanical fluid ejection devices having outlets in fixed spacial relationship relative to each other with said outlets oriented toward the substrate;

(c) providing plurality of fluid reservoirs greater in number than the plurality of electro-mechanical fluid ejection devices and a fluid handling system which selectively places each of the plurality of reservoirs in fluid communication with selected ones of the plurality of fluid ejection devices;

(d) placing a fluid in each of a plurality of reservoirs;

(e) placing a selected one of the plurality of fluid ejection devices in fluid communication with one fluid reservoir of said plurality of fluid reservoirs;

(f) activating said selected one of the plurality of fluid ejection devices and moving said substrate support relative to said selected ejection devices to form and position drops of fluid from said one fluid reservoir into a pattern of discrete test probes on said substrate;

(g) placing the selected one of the plurality of fluid ejection devices in fluid communication with another fluid reservoir of said plurality of fluid reservoirs; and

(h) activating said selected one of the plurality of fluid ejection devices and moving said substrate support relative to said selected ejection devices to form and position drops of fluid from said another fluid reservoir into a pattern of discrete test probes on said substrate;

(i) whereby a plurality of fluids can be dispensed from said reservoirs to form discrete test probes on said substrate without having the number of fluid ejection devices corresponding to the number of fluid reservoirs.

9. A method as set forth in claim 8 wherein said ejection devices are placed in communication with said reservoirs by immersing said outlets in the fluids in said reservoirs and applying negative pressure to said ejection devices to draw fluids into said ejection devices through said outlets.

10. A method as set forth in claim 8 wherein said ejection devices are placed in communication with said reservoirs by positioning a plurality of valves to place a positive pressure supply in communication with said reservoirs to urge fluids therein into said ejection devices.

11. A method as set forth in claim 8 wherein each of said drops of fluid has a volume of from about 10 pl to about 1 nl.

12. A method as set forth in claim 8 wherein the center-to-center spacing between probes is from about 1 millimeter to about twenty-five micrometers.

13. The diagnostic array formed by the process of claim 12.

14. A method as set forth in claim 8 wherein said pattern of discrete probes comprises at least about 400 probes per square centimeter.

15. A method as set forth in claim 8 wherein said pattern of discrete probes comprises at least about 1000 probes per square centimeter.

16. A method as set forth in claim 8 wherein each ejection device dispenses a solvent after dispensing the fluid from said reservoir but before dispensing the fluid from the next said reservoir sequentially placed in communication with said ejection device.

17. A method as set forth in claim 8 wherein an exterior surface of each dispensing device is sprayed with a solvent after dispensing the fluid from said reservoir but before dispensing the fluid from the next said reservoir sequentially placed in communication with said ejection device.

18. Apparatus for forming diagnostic arrays comprising a number of discrete probes to produce a test strip on a substrate surface suitable for exposure to a sample of unknown substance comprising:

(a) a substrate support;

(b) a test strip substrate positioned on said support;

(c) a plurality of electro-mechanical fluid ejection devices having outlets positioned in fixed spatial relationship relative to each other with said outlets oriented toward the test strip substrate and moveable with respect to said substrate support;

(d) a plurality of test probe fluid reservoirs greater in number than said plurality of electro-mechanical ejection devices;

(e) a fluid handling means for selectively placing each one of said plurality of fluid reservoirs individually in communication with at least one of said ejection devices;

(f) means for activating said at least one ejection devices to propel drops of test probe fluid from a selected one of said plurality of test probe fluid reservoirs toward the substrate; and

(g) means for moving said ejection devices and the substrate relative to each other to form a pattern of discrete test probes formed from selected ones of the plurality of test probe fluid reservoirs on the substrate.

19. Apparatus as defined in claim 18 wherein said outlets are sized to produce drops of test probe liquid having a volume between about 10 pl and about 1 nl.

20. Apparatus as defined in claim 18 wherein said placement means positions the impact points of multiple test probe fluid drops on the substrate to within a range of about twenty-five micrometers to about 1 millimeter.

21. Apparatus as defined in claim 18 wherein said placement means and said ejection devices are operable to place about 400 different test probes in an area of about one square centimeter.

22. Apparatus as defined in claim 18 wherein said placement means and said ejection devices are operable to place about 1000 different test probes in an area of about one square centimeter.

23. Apparatus as defined in claim 18 wherein a substantially equal number of said ejection devices and said reservoirs are provided;

and wherein said fluid handling means places a single reservoir in communication with a single ejection device.

24. Apparatus as defined in claim 18 wherein said fluid handling means comprises:

(i) at least one positive pressure supply; and

(ii) a plurality of valves connecting said positive pressure supply to at least some of said reservoirs in a selected sequence to urge the fluid in said reservoirs into said ejection devices.

25. Apparatus as defined in claim 24 having a first solvent supply connected to said fluid handling means for purging an internal portion of the apparatus.

26. Apparatus as defined in claim 25 having a second solvent supply and at least one nozzle positioned to direct solvent from said second solvent supply onto an external portion of the apparatus.

27. Apparatus as defined in claim 18 wherein said placement means is operable to selectively immerse said outlets in fluids in said reservoirs;

and wherein said fluid handling means comprises at least one negative pressure supply and a plurality of valves selectively connecting said negative pressure supply to at least some of said ejection devices to draw the fluid in said reservoirs into said ejection devices through said outlets.

28. Apparatus as defined in claim 27 including a first solvent supply connected to said fluid handling means for purging an internal portion of the apparatus.

29. Apparatus as defined in claim 28 including a second solvent supply and at least one nozzle positioned to direct solvent from said second solvent supply onto an external portion of the apparatus.