Method for making heteromultimeric polypeptides

• US 5,821,333 A
• Filed: 05/03/1995
• Issued: 10/13/1998
• Est. Priority Date: 03/01/1995
• Status: Expired due to Term

• Current Assignee: Genetec Incorporated (Noritsu Koki Co., Ltd.)
• Original Assignee: Genetec Incorporated (Noritsu Koki Co., Ltd.)
• Inventors: Presta, Leonard G., Carter, Paul J., Ridgway, John B.
• Primary Examiner(s): Hutzell, Paula K.
• Assistant Examiner(s): BAKALYAR, HEATHER
• Application Number:
  US08/434,869
• Time in Patent Office: 1,259 Days
• Field of Search: 435/172.1, 435/172.3, 435/69.1, 435/69.7, 435/70.1, 435/71.1, 530/300, 530/350, 530/387.1, 530/387.3
• US Class Current: 530/350
• CPC Class Codes: A61K 38/00 Medicinal preparations containing peptides peptides containing beta-lactam rings A61K31/00; cyclic dipeptides not having in their molecule any other peptide link than those which form their ring, e.g. piperazine-2,5-diones, A61K31/00; ergot alkaloids of the cyclic peptide type A61K31/48; containing macromolecular compounds having statistically distributed amino acid units A61K31/74; medicinal preparations containing antigens or antibodies A61K39/00; medicinal preparations characterised by the non-active ingredients, e.g. peptides as drug carriers, A61K47/00
• CPC Class Codes: A61P 31/04 Antibacterial agents
• CPC Class Codes: A61P 31/12 Antivirals
• CPC Class Codes: C07K 14/70514 CD4
• CPC Class Codes: C07K 16/2809 against the T-cell receptor (TcR)-CD3 complex
• CPC Class Codes: C07K 16/46 Hybrid immunoglobulins hybrids of an immunoglobulin with a peptide not being an immunoglobulin C07K19/00
• CPC Class Codes: C07K 16/468 Immunoglobulins having two or more different antigen binding sites, e.g. multifunctional antibodies
• CPC Class Codes: C07K 19/00 Hybrid peptides , i.e. peptides covalently bound to nucleic acids, or non-covalently bound protein-protein complexes
• CPC Class Codes: C07K 2317/526 CH3 domain
• CPC Class Codes: C07K 2319/00 Fusion polypeptide
• CPC Class Codes: C07K 2319/30 Non-immunoglobulin-derived peptide or protein having an immunoglobulin constant or Fc region, or a fragment thereof, attached thereto

Abstract

The invention relates to a method of preparing heteromultimeric polypeptides such as bispecific antibodies, bispecific immunoadhesins and antibody-immunoadhesin chimeras. The invention also relates to the heteromultimers prepared using the method. Generally, the method involves introducing a protuberance at the interface of a first polypeptide and a corresponding cavity in the interface of a second polypeptide, such that the protuberance can be positioned in the cavity so as to promote heteromultimer formation and hinder homomultimer formation. "Protuberances" are constructed by replacing small amino acid side chains from the interface of the first polypeptide with larger side chains (e.g. tyrosine or tryptophan). Compensatory "cavities" of identical or similar size to the protuberances are created in the interface of the second polypeptide by replacing large amino acid side chains with smaller ones (e.g. alanine or threonine). The protuberance and cavity can be made by synthetic means such as altering the nucleic acid encoding the polypeptides or by peptide synthesis.

Claims

1. An isolated heteromultimer comprising a first polypeptide and a second polypeptide which meet at an interface which has been engineered to promote heteromultimer formation, wherein the interface of the first polypeptide comprises a protuberance which is positionable in a cavity in the interface of the second polypeptide, and wherein the amino acid sequence of an original interface has been altered so as to introduce the protuberance and/or cavity into the engineered interface such that a greater ratio of hetermultimer:

homomultimer forms than that for a multimer having a nonengineered interface.

2. The heteromultimer of claim 1 wherein the protuberance comprises an introduced arginine (R) residue.

3. The heteromultimer of claim 1 wherein the protuberance comprises an introduced phenylalanine (F) residue.

4. The heteromultimer of claim 1 wherein the protuberance comprises an introduced tyrosine (Y) residue.

5. The heteromultimer of claim 1 wherein the protuberance comprises an introduced tryptophan (W) residue.

6. The heteromultimer of claim 1 wherein the cavity is formed by an introduced alanine (A) residue.

7. The heteromultimer of claim 1 wherein the cavity is formed by an introduced serine (S) residue.

8. The heteromultimer of claim 1 wherein the cavity is formed by an introduced threonine (T) residue.

9. The heteromultimer of claim 1 wherein the cavity is formed by an introduced valine (V) residue.

10. The heteromultimer of claim 1 wherein the first polypeptide and second polypeptide each comprise an antibody constant domain.

11. The heteromultimer of claim 10 wherein the antibody constant domain is a C_H 3 domain.

12. The heteromultimer of claim 11 wherein the antibody constant domain is from an IgG.

13. The heteromultimer of claim 12 wherein the IgG is human IgG₁.

14. The heteromultimer of claim 1 which is a bispecific antibody.

15. The heteromultimer of claim 1 which is a bispecific immunoadhesin.

16. The heteromultimer of claim 1 which is an antibody-immunoadhesin chimera.

17. The heteromultimer of claim 1 wherein the protuberance and cavity have been introduced into the interface of the first polypeptide and the interface of the second polypeptide, respectively.

18. A composition comprising the heteromultimer of claim 1 and a carrier.

19. The heteromultimer of claim 1 wherein the interface is an immunoglobulin domain.

20. The heteromultimer of claim 19 wherein the interface is a C_H 3 domain.

21. The heteromultimer of claim 19 wherein the interface is an immunoglobulin variable domain.

22. The heteromultimer of claim 1 wherein the first polypeptide comprises a binding domain.

23. The heteromultimer of claim 22 wherein the binding domain is an antibody variable domain.

24. The heteromultimer of claim 22 wherein the binding domain is a ligand binding domain.

25. The heteromultimer of claim 22 wherein the second polypeptide comprises a binding domain.

26. The heteromultimer of claim 1 which comprises an introduced cavity, wherein the cavity is not formed by an introduced cysteine residue.

27. An isolated heteromultimer comprising a first polypeptide and a second polypeptide which meet at an engineered antibody C_H 3 domain interface, wherein the interface of the first polypeptide comprises a protuberance which is positionable in a cavity in the interface of the second polyeptide, and wherein the amino acid sequence of an original antibody C_H 3 domain interface has been altered to encode the protuberance and/or cavity such that a greater ratio of heteromultimer:

homomultimer forms than that for a multimer having a nonengineered interface.