Very large scale immobilized polymer synthesis
First Claim
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1. An ordered method for forming a plurality of different polypeptides or nucleic acids occupying known locations on a substrate by sequential addition of nucleosides, nucleotides or amino acids to said substrate, comprising:
- (a) providing a substrate having a surface with a localized area occupied by a protected nucleoside, nucleotide or amino acid;
(b) deprotecting the protected nucleoside, nucleotide or amino acid in a fraction of the localized area to produce a deprotected nucleoside, nucleotide or amino acid;
(c) reacting the deprotected nucleoside, nucleotide or amino acid with a protected nucleoside, nucleotide or amino acid, whereby the protected nucleoside, nucleotide or amino acid attaches to the deprotected nucleoside, nucleotide or amino acid to produce a protected nucleic acid or polypeptide; and
(d) repeating (b) and (c) at least once wherein the fraction in step (b) is a fraction of a fraction in a previous deprotecting step (b) to produce an array of different nucleic acids or polypeptides occupying different fractions at known locations within the localized area.
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Abstract
A synthetic strategy for the creation of large scale chemical diversity. Solid-phase chemistry, photolabile protecting groups, and photolithography are used to achieve light-directed spatially-addressable parallel chemical synthesis. Binary masking techniques are utilized in one embodiment. A reactor system, photoremovable protecting groups, and improved data collection and handling techniques are also disclosed. A technique for screening linker molecules is also provided.
227 Citations
9 Claims
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1. An ordered method for forming a plurality of different polypeptides or nucleic acids occupying known locations on a substrate by sequential addition of nucleosides, nucleotides or amino acids to said substrate, comprising:
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(a) providing a substrate having a surface with a localized area occupied by a protected nucleoside, nucleotide or amino acid;
(b) deprotecting the protected nucleoside, nucleotide or amino acid in a fraction of the localized area to produce a deprotected nucleoside, nucleotide or amino acid;
(c) reacting the deprotected nucleoside, nucleotide or amino acid with a protected nucleoside, nucleotide or amino acid, whereby the protected nucleoside, nucleotide or amino acid attaches to the deprotected nucleoside, nucleotide or amino acid to produce a protected nucleic acid or polypeptide; and
(d) repeating (b) and (c) at least once wherein the fraction in step (b) is a fraction of a fraction in a previous deprotecting step (b) to produce an array of different nucleic acids or polypeptides occupying different fractions at known locations within the localized area. - View Dependent Claims (2, 3, 4, 5, 6)
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7. An ordered method for forming a plurality of different nucleic acids or polypeptides occupying known locations on a substrate by sequential addition of nucleosides, nucleotides or amino acids to said substrate, comprising:
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(a) providing a substrate having a surface with a localized area occupied by a protected nucleoside, nucleotide or amino acid;
(b) deprotecting the protected nucleoside, nucleotide or amino acid in a fraction of the localized area to produce a deprotected nucleoside, nucleotide or amino acid;
(c) immersing the surface of the substrate in a solution comprising a protected nucleoside, nucleotide or amino acid, whereby the protected nucleoside, nucleotide or amino acids attaches to the deprotected nucleoside, nucleotide or amino acid to produce a protected nucleic acid or polypeptide in the fraction of the localized area; and
(d) repeating (b) and (c) at least once wherein the fraction in step (b) is a fraction of a fraction in a previous deprotecting step (b) to produce an array of different nucleic acids or polypeptides occupying different fractions at known locations within the localized area. - View Dependent Claims (8, 9)
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Specification