Microdevices for screening biomolecules

• US 6,682,942 B1
• Filed: 05/12/2000
• Issued: 01/27/2004
• Est. Priority Date: 07/14/1998
• Status: Expired due to Fees

• Current Assignee: Zyomyx, Inc.
• Original Assignee: Zyomyx, Inc.
• Inventors: Wagner, Peter, Itin, Christian, Nock, Steffen, Ault-Riche, Dana
• Primary Examiner(s): Chin, Christopher L.
• Application Number:
  US09/570,589
• Time in Patent Office: 1,355 Days
• Field of Search: 436/501, 436/518, 436/514, 436/524
• US Class Current: 506/9
• CPC Class Codes: B82Y 30/00 Nanotechnology for materials or surface science, e.g. nanocomposites
• CPC Class Codes: G01N 33/569 for microorganisms, e.g. protozoa, bacteria, viruses

Abstract

Methods for the parallel, in vitro screening of biomolecular activity using miniaturized microfabricated devices are provided. The biomolecules immobilized on the surface of the devices employed in the method of the present invention include proteins, polypeptides, polynucleotides, polysaccharides, phospholipids, and related unnatural polymers of biological relevance. These methods are useful in drug development, functional proteomics studies and clinical diagnostics and are preferably used for the parallel screening of families of related proteins.

Claims

1. A method of screening an immobilized biological moiety for its ability to interact with an analyte contained within a fluid sample comprising the steps of:

(i) providing a channel sample detection device, said sample detection device comprising;

(a) a substrate having a substrate surface;

(b) a channel formed in or on said substrate adjacent said substrate surface, said channel extending between first and second ends, and having a bottom wall surface defining a substantially planar immobilization region intermediate the first and second ends and opposing side walls;

(c) a cover attached adjacent said substrate surface forming with said channel a closed channel having first and second ports adjacent said first and second ends;

(d) a thin film having a hydrophilic display surface covering said immobilization region, said thin film being effective to resist non-specific protein binding; and

,

(e) at least one immobilization group capable of immobilizing said biological moiety, said immobilization group being attached to said thin film,

wherein if said fluid sample containing said analyte is introduced into said channel and said analyte interacts with said biological moiety when such biological moiety is immobilized to said immobilization group to form said immobilized biological moiety, then such interaction is observable;

(ii) contacting said fluid sample with said channel so that said fluid sample contacts said immobilized biological moiety; and

,

(iii) monitoring said interaction between said immobilized biological moiety and said analyte.

2. The method of claim 1, wherein at least one of said ends is formed between said cover and said upper surface of said substrate.

3. The method of claim 1, wherein said channel have a cross-section that is between about 10 μ

m and 500 μ

m, and a length between about 1 to 20 mm.

4. The method of claim 1, wherein said cover is wholiy or partly non-translucent or non-transparent.

5. The method of claim 1, wherein said cover is wholly or partly translucent or transparent.

6. The method of claim 1, wherein said reactive regions in said microchannels are oriented parallel to other reactive regions in other microchannels in said device.

7. The method of claim 1, wherein said immobilization molecules form an X—

R—

Y monolayer.

8. The method of claim 1, further comprising a coating disposed between said bottom wall surface within said immobilization regions and said immobilization molecules within such immobilization regions.

9. The method of claim 1, wherein said immobilization molecules form a lipid bilayer.

10. The method of claim 1, wherein said detector detects the product of at least one of said interactions.

11. The method of claim 1, wherein said opposing side walls are formed from a material different than said bottom wall.