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Nested oligonucleotides containing a hairpin for nucleic acid amplification

  • US 6,919,189 B2
  • Filed: 12/10/2001
  • Issued: 07/19/2005
  • Est. Priority Date: 12/11/2000
  • Status: Active Grant
First Claim
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1. A method of amplifying nucleic acid comprising the steps of:

  • a) annealing a primer to a template nucleic acid sequence, the primer having a first portion which anneals to the template and a second portion of predetermined sequence;

    b) synthesizing a polynucleotide that anneals to and is complementary to the portion of the template adjacent to the location at which the first portion of the primer anneals to the template, the polynucleotide having a first end and a second end, wherein the first end incorporates the primer, c) separating the polynucleotide synthesized in step (b) from the template;

    d) annealing a nested oligonucleotide to the second end of the polynucleotide synthesized in step (b), the nested oligonucleotide having a first portion that anneals to the second end of the polynucleotide, and a second portion having a hairpin structure;

    e) extending the polynucleotide synthesized in step (b) to provide an extended polynucleotide comprising a portion that is complementary to the hairpin structure and a terminal portion that is complementary to the predetermined sequence; and

    f) amplifying the extended polynucleotide using a single primer having the predetermined sequence.

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