Method and multiple reservoir apparatus for fabrication of biomolecular arrays

• US 7,026,124 B2
• Filed: 10/08/2002
• Issued: 04/11/2006
• Est. Priority Date: 09/09/1998
• Status: Expired due to Fees

• Current Assignee: Agilent Technologies, Inc.
• Original Assignee: Agilent Technologies, Inc.
• Inventors: Barth, Phillip W., Schleifer, Arthur, Caren, Michael P., Schembri, Carol T., McAllister, William H.
• Primary Examiner(s): FORMAN, BETTY J
• Application Number:
  US10/267,913
• Publication Number:
  US 20040002072A1
• Time in Patent Office: 1,281 Days
• Field of Search: 435/6, 435/7.1, 435/174, 435/283.1, 435/287.2, 422/68.1, 422/100
• US Class Current: 435/6.13
• CPC Class Codes: B01J 19/0046 Sequential or parallel reactions, e.g. for the synthesis of polypeptides or polynucleotides; Apparatus and devices for combinatorial chemistry or for making molecular arrays synthesis methods per se C40B50/00
• CPC Class Codes: B01J 2219/00378 Piezoelectric or ink jet dispensers
• CPC Class Codes: B01J 2219/00527 Sheets
• CPC Class Codes: B01J 2219/00585 Parallel processes
• CPC Class Codes: B01J 2219/00596 Solid-phase processes
• CPC Class Codes: B01J 2219/00605 the compounds being directly bound or immobilised to solid supports
• CPC Class Codes: B01J 2219/00612 the surface being inorganic
• CPC Class Codes: B01J 2219/00659 Two-dimensional arrays
• CPC Class Codes: B01J 2219/00722 Nucleotides
• CPC Class Codes: B01L 3/0268 using pulse dispensing or spraying, eg. inkjet type, piezo actuated ejection of droplets from capillaries
• CPC Class Codes: B41J 2/14145 Structure of the manifold
• CPC Class Codes: B41J 2002/14387 Front shooter
• CPC Class Codes: C12Q 1/6837 using probe arrays or probe chips C12Q1/6874 takes precedence
• CPC Class Codes: C40B 40/06 Libraries containing nucleotides or polynucleotides, or derivatives thereof
• CPC Class Codes: C40B 60/14 for creating libraries

Abstract

Methods and apparatus for delivering a plurality of different biological materials onto discrete locations on a receiving surface, as for example to fabricate an array of different biological materials. The apparatus and methods may include a plurality of orifices in an orifice member, at least six delivery chambers each in fluid conducting relationship with at least one of the orifices, a plurality of reservoirs each in fluid communication with at least one of the delivery chambers, means associated with each orifice for propelling fluid through the associated orifice from the delivery chamber that is in fluid conducting relationship with the orifice, and a vent for commonly venting at least two of the reservoirs. In some embodiments the chambers and reservoirs are loaded with fluids containing selected biomolecules by drawing the selected fluids into the chambers through the orifices; in other embodiments the fluids are introduced into the reservoirs. Also, methods for depositing biological materials onto a surface, as for example to fabricate a biomolecular array, employ the apparatus.

Claims

1. A method for loading a plurality of different biological fluids into a printing apparatus having a plurality of orifices in an orifice member, a plurality of delivery chambers each in fluid conducting relationship with at least one of the orifices, a plurality of reservoirs each in fluid communication with at least one of said delivery chambers, a means associated with each orifice for propelling fluid through the associated orifice from the delivery chamber that is in fluid conducting relationship with the orifice, said means positioned within the delivery chamber that is in fluid conducting relationship with the orifice, and a vent for commonly venting at least two of said reservoirs, the method comprising contacting said orifices with a fluid outside said delivery chamber and permitting said outside fluid to flow through said orifices into said delivery chambers.

2. A method according to claim 1 wherein each delivery chamber is in fluid conducting relationship with multiple orifices.

3. A method according to claim 1 additionally comprising reducing pressure in the reservoirs to assist the flow of the fluid.

4. A method according to claim 1, wherein said means for propelling fluid is a thermal propelling means.

5. A method according to claim 1, wherein said means for propelling fluid is a piezoelectric propelling means.

6. A method for making an array of biopolymers using a printing apparatus having a plurality of orifices in an orifice member, a plurality of delivery chambers each in fluid conducting relationship with at least one of the orifices, a plurality of reservoirs each in fluid communication with at least one of said delivery chambers, a means associated with each orifice for propelling fluid through the associated orifice from the delivery chamber that is in fluid conducting relationship with the orifice, said means positioned within the delivery chamber that is in fluid conducting relationship with the orifice, and a vent for commonly venting at least two of said reservoirs, the method comprising:

loading a plurality of different fluids containing the biopolymers or components for their construction into the apparatus by contacting said orifices with the different fluids outside said delivery chambers and permitting said outside fluid to flow through said orifices into said delivery chambers; and

depositing the fluids onto a surface so as to fabricate the array on the surface.

7. A method according to claim 6 wherein each delivery chamber is in fluid conducting relationship with multiple orifices.

8. A method according to claim 6 wherein the orifices are contacted with fluids containing the biopolymers.

9. A method according to claim 6, wherein said means for propelling fluid is a thermal propelling means.

10. A method according to claim 6, wherein said means for propelling fluid is a piezoelectric propelling means.

11. A method for loading a plurality of different biological fluids into a printing apparatus having a plurality of orifices in an orifice member, a plurality of delivery chambers each in fluid conducting relationship with multiple orifices, a plurality of reservoirs each in fluid communication with at least one of said delivery chambers, and means associated with each orifice for propelling fluid through the associated orifice from the delivery chamber that is in fluid conducting relationship with the orifice, and a vent for commonly venting at least two of said reservoirs, the method comprising contacting said orifices with a fluid outside said delivery chamber and permitting said outside fluid to flow through said orifices into said delivery chambers.

12. A method according to claim 11, additionally comprising reducing pressure in the reservoirs to assist the flow of the fluid.

13. A method according to claim 11, wherein the orifices are contacted with fluids containing the biopolymers.

14. A method according to claim 11, wherein said means associated with each orifice for propelling fluid through the associated orifice from the delivery chamber that is situated within the delivery chamber that is in fluid conducting relationship with the orifice.

15. A method according to claim 11, wherein said means for propelling fluid is a thermal propelling means.

16. A method according to claim 11, wherein said means for propelling fluid is a piezoelectric propelling means.

17. A method for making an array of biopolymers using a printing apparatus having a plurality of orifices in an orifice member, a plurality of delivery chambers each in fluid conducting relationship with multiple orifices, a plurality of reservoirs each in fluid communication with at least one of said delivery chambers, and a vent for commonly venting at least two of said reservoirs, the method comprising:

loading a plurality of different fluids containing the biopolymers or components for their construction into the apparatus by contacting said orifices with the different fluids outside said delivery chambers and permitting said outside fluid to flow through said orifices into said delivery chambers; and

depositing the fluids onto a surface so as to fabricate the array on the surface.

18. A method according to claim 17, additionally comprising reducing pressure in the reservoirs to assist the flow of the fluid.

19. A method according to claim 17, wherein the orifices are contacted with fluids containing the biopolymers.

20. A method according to claim 17, wherein said printing apparatus has a means associated with each orifice for propelling fluid through the associated orifice from the delivery chamber that is in fluid conducting relationship with the orifice, where said means for propelling fluid is situated within the delivery chamber that is in fluid conducting relationship with the orifice.

21. A method according to claim 17, wherein said means for propelling fluid is a thermal propelling means.

22. A method according to claim 17, wherein said means for propelling fluid is a piezoelectric propelling means.