System for detection of a functional interaction between a compound and a cellular signal transduction component

• US 7,090,991 B2
• Filed: 03/31/2003
• Issued: 08/15/2006
• Est. Priority Date: 06/14/1999
• Status: Expired due to Fees

• Current Assignee: Cadus Technologies Incorporated
• Original Assignee: Cadus Technologies Incorporated
• Inventors: Oehlen, Lambertus J.
• Primary Examiner(s): Li, Ruixiang
• Application Number:
  US10/404,018
• Publication Number:
  US 20030211615A1
• Time in Patent Office: 1,233 Days
• Field of Search: 435/4, 435/6, 435/7.1, 435/7.2, 435/7.31
• US Class Current: 435/7.31
• CPC Class Codes: C12N 15/81 for yeasts
• CPC Class Codes: G01N 2333/4719 G-proteins
• CPC Class Codes: G01N 33/5008 for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
• CPC Class Codes: G01N 33/5041 involving analysis of members of signalling pathways

Abstract

The present invention makes available a rapid, reproducible, robust assay system for screening and identifying pharmaceutically effective compounds that specifically interact with and modulate the activity of a cellular protein, e.g., a receptor. or ion channel. The subject assay enables rapid screening of large numbers of compounds to identify those which act as an agonist or antagonist to the bioactivity of the cellular protein. In this system, the first cell is treated with a compound, and functional interaction of this compound with a cellular receptor yields a secreted signal. A second cell, bearing a receptor for this secreted signal, makes use of an indicator gene in a signaling pathway coupled to this second receptor. The subject assays include methods of identifying compounds which specifically modulate, for example, heterologous receptors coupled to the pheromone response pathway in yeast. The subject assays are particularly amenable to the identification of specific agonists and antagonists of G protein-coupled receptors.

Claims

1. A method for identifying a compound that modulates a heterologous G protein-coupled receptor in a yeast cell, said method comprising:

providing a first recombinant yeast cell which comprises a heterologous G protein-coupled receptor that is functionally integrated into a first pheromone response signal transduction pathway of said first yeast cell, wherein a signal molecule is produced by said first yeast cell upon activation of said first signal transduction pathway;

providing a second recombinant yeast cell that does not comprise a heterologous G protein coupled receptor, but comprises a reporter gene, which produces a detectable signal upon activation of a second signal transduction pathway of said second yeast cell, in response to production of said signal molecule by said first yeast cell;

contacting said first yeast cell with a test compound;

contacting said second yeast cell with said signal molecule produced by said first yeast cell; and

detecting said detectable signal produced by said second yeast cell, thereby identifying a compound that modulates a heterologous G protein-coupled receptor in a yeast cell.

2. The method of claim 1, wherein said second yeast cell further comprises a receptor for said signal molecule, wherein said receptor is functionally integrated into a second pheromone response signal transduction pathway of said second yeast cell such that a activation of said second pheromone response signal transduction pathway causes transcription of said reporter gene, said transcription providing said detectable signal.

3. The method of claim 1, wherein said first and second yeast coils are of opposite mating types.

4. The method of claim 2, wherein said first cell is a MAT S. cerevisiac cell and said second cell is a MATa S. cerevisiae cell.

5. The method of claim 3, wherein said reporter gene is operatively linked to a pheromone responsive promoter.

6. The method of claim 5, wherein said reporter gene is selected from the group consisting of lacZ, HIS3 and LEU2, and said pheromone responsive promoter is FUS 1.

7. The method of claim 4, wherein said MAT S. cerevisiae cell has the endogenous MF1 gene inactivated.

8. The method of claim 7, wherein said MF1 gene is inactivated by deletion.

9. The method of claim 7, wherein said MF1 gene is inactivated by mutation.

10. The method of claim 2, wherein said receptor in said second yeast cell is STE2 or STE3.

11. The method of claim 4, wherein said signal molecule is a protein secreted by said first cell.

12. The method of claim 11, wherein said secreted protein is MF.

13. The method of claim 12, wherein said heterologous G protein-coupled receptor is selected from the group consisting of molatonin receptor 1a, galanin receptor 1, neurotensin receptor, adenosine receptor 2a, somatostatin receptor 2, and corticotropin releasing factor receptor 1a.

14. The method of claim 13, wherein said heterologous G protein-coupled receptor is melatonin receptor 1a.

15. The method of claim 1, wherein said first yeast cell further comprises a heterologous Gα

protein.

16. The method of claim 15, wherein said heterologous Gα

protein is a chimeric Gα

protein.

17. The method claim 15, wherein said heterologous Gα

protein is a mutated Gα

protein.

18. The method of claim 1, wherein said heterologous G protein-coupled receptor functionally couples to the endogenous yeast GPA-1 protein subunit.

19. The method of claim 1, wherein said test compound comprises a heterologous test polypeptide expressed by said first yeast cell, wherein said heterologous test polypeptide is transported to a location allowing interaction with the extracellular region of said heterologous receptor, and wherein said heterologous test polypeptide is expressed at a sufficient level such that modulation of the signal transduction activity of said heterologous receptor by the heterologous test polypeptide generates said signal molecule.

20. The method of claim 19, wherein said heterologous test polypeptide includes a signal sequence that facilitates transport of the polypeptide to a location allowing interaction with the extracellular region of the receptor.

21. The method of claim 15, wherein said heterologous Gα

protein is a mammalian Gα

protein.

22. A method for detecting a heterologous gene product produced by a yeast cell comprising:

causing a first recombinant yeast cell comprising a heterologous G protein coupled receptor to transmit a signal through a pheromone response signal transduction pathway of said first yeast cell, such that a heterologous gene product is produced by said first yeast cell upon transmission of said signal through said signal transduction pathway; and

contacting said heterologous gene product with a second recombinant yeast cell that does not comprise a heterologous G protein coupled receptor, but comprises a reporter gene, which produces a detectable signal upon activation of a signal transduction pathway of said second yeast cell,

detecting said detectable signal produced by said second yeast cell, thereby detecting said a heterologous gene product produced by said first yeast cell.

23. A method for identifying a compound that modulates production of a heterologous gene product produced by a yeast cell, said method comprising:

providing a first recombinant yeast cell, comprising a heterologous G protein coupled receptor that is functionally integrated into a pheromone response signal transduction pathway of said first yeast cell, wherein said first yeast cell produces a heterologous gene product upon activation or said signal transduction pathway;

providing a second recombinant yeast cell that does not comprises a heterologous G protein coupled receptor, but comprises a reporter gene, which produces a detectable signal activation of a signal transduction pathway of said second yeast cell, contacting said first yeast cell with a test compound;

contacting said second yeast cell with said heterologous gene product produced by said first yeast cell; and

detecting said detectable signal expressed by said second yeast cell, thereby detecting a compound that modulates production of said heterologous gene product produced by said first yeast cell, contacting said first yeast cell with a test compound;

contacting said second yeast cell with said heterologous gene product produced by said first yeast cell; and

detecting said detectable signal expressed by said second yeast cell, thereby detecting a compound that modulates production of heterologous gene product produced by said first yeast cell.