Apparatus for interrogating an addressable array

• US 7,198,939 B2
• Filed: 02/21/2002
• Issued: 04/03/2007
• Est. Priority Date: 01/28/2000
• Status: Expired due to Fees

• Current Assignee: Agilent Technologies, Inc.
• Original Assignee: Agilent Technologies, Inc.
• Inventors: Sampas, Nicholas M., King, David A., Dorsel, Andreas N.
• Primary Examiner(s): FORMAN, BETTY J
• Application Number:
  US10/080,641
• Publication Number:
  US 20020132261A1
• Time in Patent Office: 1,867 Days
• Field of Search: 356/335, 356/336, 356/337, 356/338, 356/340, 356/343, 356/339, 356/73.1, 235/462.01, 235/462.41, 235/462.25, 235/462.11
• US Class Current: 435/283.1
• CPC Class Codes: B01J 2219/00527 Sheets
• CPC Class Codes: B01J 2219/00547 Bar codes
• CPC Class Codes: B01J 2219/00585 Parallel processes
• CPC Class Codes: B01J 2219/00596 Solid-phase processes
• CPC Class Codes: B01J 2219/00605 the compounds being directly bound or immobilised to solid supports
• CPC Class Codes: B01J 2219/00626 Covalent
• CPC Class Codes: B01J 2219/00637 by coating it with another layer
• CPC Class Codes: B01J 2219/00659 Two-dimensional arrays
• CPC Class Codes: B01J 2219/00695 Synthesis control routines, e.g. using computer programs
• CPC Class Codes: B01J 2219/00702 Processes involving means for analysing and characterising the products
• CPC Class Codes: B01J 2219/00722 Nucleotides
• CPC Class Codes: C40B 40/06 Libraries containing nucleotides or polynucleotides, or derivatives thereof
• CPC Class Codes: C40B 70/00 Tags or labels specially adapted for combinatorial chemistry or libraries, e.g. fluorescent tags or bar codes
• CPC Class Codes: G01N 2021/6421 Measuring at two or more wavelengths
• CPC Class Codes: G01N 2021/6441 with two or more labels
• CPC Class Codes: G01N 21/6428 Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" in vivo A61B5/00; immunoassay G01N33/53
• CPC Class Codes: G01N 21/6452 Individual samples arranged in a regular 2D-array, e.g. multiwell plates

Abstract

A method and apparatus of interrogating an addressable array unit, which includes a substrate, a light reflecting layer on a front side of the substrate, and a plurality of features on a front side of the array. The method may include, for each of multiple features, illuminating the feature simultaneously with reflected and non-reflected interrogating light. A light emitted from respective features is detected. Either or both, constructive interference of interrogating light at the features, or constructive interference of light emitted from the features, can be obtained to allow lowering of light power from the source, enhanced signal, or reduced noise, or combinations of the foregoing. High depth discrimination may also be obtained without the need for a confocal detection system with conventional pinhole.

Claims

1. An apparatus for interrogating an addressable array of multiple features of different biopolymenc moieties, comprising:

(a) an adjustable detection angle detector system comprising more than one detector each of which is aligned with an emission filter that filters out light of an interrogating wavelength such that each detector of the detection system detects light of different wavelengths at respective different detection angles with an optical axis aligned at each detection angle, wherein said system is configured for positioning at least one of said more than one detectors at a site for receiving a constructively interfering emission from an array having a reflective coating, wherein said system is further configured for determining said position for receiving a constructively interfering emission; and

(b) a processor programmed to receive signals from the detector system and correlate the received signals with respective biopolymeric features of the array.

2. An apparatus according to claim 1 additionally comprising a light source to provide an interrogating light in response to which the features emit the light of different wavelengths.

3. An apparatus according to claim 2 wherein the light source produces a spot of light at the array, the apparatus additionally comprising a scanning system which scans the interrogating light spot across the array.

4. An apparatus according to claim 1 additionally comprising a reader to read a code carried by an array unit, and a processor which causes the detector system to detect emitted light at a detection angle based on the read code.

5. An apparatus according to claim 1 wherein said apparatus further includes an addressable array of multiple features of different biopolymeric moieties and a reflective coating.

6. An apparatus according to claim 5, wherein said array is forward of said reflective coating.

7. An apparatus according to claim 2, wherein said interrogating light source is configured for being adjusted in a manner sufficient to constructively illuminate a feature with both reflected and non-reflected light.