Device for capturing beads and method and apparatus for arraying beads

• US 7,358,098 B2
• Filed: 08/03/2005
• Issued: 04/15/2008
• Est. Priority Date: 05/13/2005
• Status: Expired due to Fees

• Current Assignee: Hitachi Software Engineering Co., Ltd. (Hitachi, Ltd.)
• Original Assignee: Hitachi Software Engineering Co., Ltd. (Hitachi, Ltd.)
• Inventors: Kohara, Yoshinobu, Noda, Hideyuki
• Primary Examiner(s): Lam; Ann Y.
• Application Number:
  US11/195,701
• Publication Number:
  US 20060257994A1
• Time in Patent Office: 986 Days
• Field of Search: 436/518, 435/283.1, 4352867-2873, 435/288.4, 422/58, 422 62- 66
• US Class Current: 436/518
• CPC Class Codes: B01J 19/0046 Sequential or parallel reactions, e.g. for the synthesis of polypeptides or polynucleotides; Apparatus and devices for combinatorial chemistry or for making molecular arrays synthesis methods per se C40B50/00
• CPC Class Codes: B01J 2219/00315 Microtiter plates
• CPC Class Codes: B01J 2219/00364 Pipettes
• CPC Class Codes: B01J 2219/00373 Hollow needles
• CPC Class Codes: B01J 2219/00414 using suction
• CPC Class Codes: B01J 2219/00466 in a slurry
• CPC Class Codes: B01J 2219/00468 by manipulation of individual beads
• CPC Class Codes: B01J 2219/005 Beads
• CPC Class Codes: B01J 2219/0052 in the shape of elongated tubes
• CPC Class Codes: B01L 2200/0657 Pipetting powder
• CPC Class Codes: B01L 2400/049 vacuum
• CPC Class Codes: B01L 3/021 Pipettes, i.e. with only one conduit for withdrawing and redistributing liquids
• CPC Class Codes: G01N 2035/00574 Means for distributing beads
• CPC Class Codes: G01N 35/10 Devices for transferring samples or any liquids to, in, or from, the analysis apparatus, e.g. suction devices, injection devices G01N35/0099 takes precedence

Abstract

Beads having diameters of several tens of micrometers to several millimeters and immobilized with biomolecules are captured by one kind of bead capturing nozzle one by one without fail. Using a bead holding plate having a plurality of wells each of which holds a plurality of the beads and a solution, a vibration generator mounted with a stage to attach the bead holding plate, and a bead capturing nozzle for bead capture connected to a suction pump, only a single bead is captured at the tip of the bead capturing nozzle by inserting the nozzle having an inner diameter smaller than the beads and a negative pressure inside created by the pump into the solution to allow the nozzle to come in contact with the beads in the well, applying a vibration to the bead holding plate by the vibration generator, and withdrawing the bead capturing nozzle into the air.

Claims

1. A device for capturing beads comprising:

a chamber to hold a solution containing a plurality of beads;

a vibration generator to vibrate the chamber;

a long and narrow bead capturing nozzle to capture the beads at a tip thereof;

a suction pump connected to the bead capturing nozzle; and

an actuator to insert the tip of the bead capturing nozzle into the solution in the chamber as well as to lift up the bead capturing nozzle,

wherein an opening at the tip of the bead capturing nozzle is formed as smaller than a diameter of several tens of micrometers to several millimeters of each of the beads, and an outer diameter of the tip of the bead capturing nozzle is larger than the diameter of several tens of micrometers to several millimeters of each of the beads.

2. The device for capturing beads according to claim 1, wherein the vibration generator generates a vibration of a frequency equal to or higher than 20 Hz.

3. The device for capturing beads according to claim 2, wherein the amplitude of the vibration generated by the vibration generator is equal to or larger than 0.1 mm.

4. The device for capturing beads according to claim 1, wherein the vibration generator vibrates the chamber in the direction perpendicular to the axis direction of the bead capturing nozzle.

5. The device for capturing beads according to claim 1, wherein the vibration generator generates vibration such that the center of the chamber is rotated in a plane perpendicular to the axis direction of the bead capturing nozzle.

16. The device for capturing beads according to claim 1, wherein each of the beads has biomolecular probes or protein immobilized thereon.

6. A method for arraying beads comprising the steps of:

inserting, into a solution in a chamber containing a plurality of beads immobilized with a biomolecular probe on the surface thereof, a bead capturing nozzle having an opening smaller than the diameter of the beads formed at the tip thereof and the outer diameter of the tip larger than the diameter of the beads;

exerting a suction force on the tip of the bead capturing nozzle;

vibrating the chamber;

withdrawing the bead capturing nozzle retaining a single bead at the tip via suction from the solution in the chamber; and

introducing the bead retained at the tip of the bead capturing nozzle via suction into a bead array container.

7. The method for arraying beads according to claim 6, wherein a plurality of kinds of beads immobilized with different biomolecular probes are arrayed in a row in the bead array container in orderly sequence.

8. The method for arraying beads according to claim 6, wherein the bead array container is provided with a plurality of flow channels having different inner diameters that are formed on a same chip and beads having different diameters corresponding to each inner diameter are introduced into the plurality of flow channels, respectively.

9. The method for arraying beads according to claim 6, wherein a vibration having a frequency equal to or higher than 20 Hz is provided to the chamber at the step of vibrating the chamber.

10. The method for arraying beads according to claim 6, wherein the amplitude of the vibration is equal to or larger than 0.1 mm.

11. An apparatus for arraying beads comprising:

a stage to retain a plurality of chambers to hold solutions containing a plurality of beads respectively;

a bead capturing nozzle having an opening smaller than the diameter of the beads formed at the tip thereof and an outer diameter of the tip larger than the diameter of the beads;

an actuator to drive the bead capturing nozzle;

a vacuum/pressure unit to develop a negative or positive pressure at the tip of the bead capturing nozzle;

a vibration unit to vibrate the stage;

a holder for bead array container that retains a bead array container to hold beads; and

a control unit, wherein the control unit allows the bead capturing nozzle to be inserted into the vibrating chamber on the stage by controlling the actuator, the bead capturing nozzle to be lifted up from the chamber by controlling the actuator in a state that a single bead is captured at the tip of the bead capturing nozzle by controlling the vacuum/pressure unit to develop a negative pressure at the tip of the bead capturing nozzle, the bead capturing nozzle capturing a single bead at the tip to be moved to the position of the bead array container by controlling the actuator, and the captured bead to be introduced into the bead array container by controlling the vacuum/pressure unit to develop a positive pressure at the tip.

12. The apparatus for arraying beads according to claim 11, wherein a plurality of the bead capturing nozzles are arranged and the holder for bead array container retains the same number of the bead array containers as the number of the bead capturing nozzles.

13. The apparatus for arraying beads according to claim 11, wherein a unit to detect the state that the bead is retained at the tip of the bead retaining nozzle is provided.

14. The apparatus for arraying beads according to claim 11, wherein a unit to detect the state that the bead is introduced into the bead array container is provided.

15. The apparatus for arraying beads according to claim 11, wherein the holder for bead array container retains the bead array container provided with a plurality of flow channels with different inner diameters on a same chip.

17. A device for capturing beads comprising:

a chamber holding a solution containing a plurality of beads each of which has biomolecular probes or protein immobilized thereon;

a vibration generator to vibrate the chamber;

a long and narrow bead capturing nozzle to capture the beads at a tip thereof;

a suction pump connected to the bead capturing nozzle; and

an actuator to insert the tip of the bead capturing nozzle into the solution in the chamber as well as lift up the bead capturing nozzle,

wherein an opening formed at the tip of the bead capturing nozzle is smaller than a diameter of each of the beads, and an outer diameter of the tip of the bead capturing nozzle is larger than the diameter of each of the beads.

18. The device for capturing beads according to claim 17, wherein the beads have diameters of several tens of micrometers to several millimeters.