Electronically readable microarray with electronic addressing function

• US 7,488,607 B2
• Filed: 09/30/2003
• Issued: 02/10/2009
• Est. Priority Date: 09/30/2003
• Status: Expired due to Fees

• Current Assignee: Agilent Technologies, Inc.
• Original Assignee: Agilent Technologies, Inc.
• Inventors: Hidalgo, August, Tom-Moy, May, McAllister, William, Myerholtz, Carl
• Primary Examiner(s): Chin; Christopher L
• Application Number:
  US10/676,707
• Publication Number:
  US 20050079505A1
• Time in Patent Office: 1,960 Days
• Field of Search: 435/7.1, 4352871-2872, 435/287.9, 435/288.4, 435/973, 436/149, 436/806, 422/68.1, 422/82.01, 422/82.02
• US Class Current: 436/524
• CPC Class Codes: C12Q 1/6825 Nucleic acid detection involving sensors
• CPC Class Codes: C12Q 1/6837 using probe arrays or probe chips C12Q1/6874 takes precedence
• CPC Class Codes: C12Q 2565/607 being a sensor, e.g. electrode
• CPC Class Codes: Y10S 435/973 Simultaneous determination of more than one analyte
• CPC Class Codes: Y10S 436/806 Electrical property or magnetic property
• CPC Class Codes: Y10S 436/809 Multifield plates or multicontainer arrays
• CPC Class Codes: Y10S 436/815 Test for named compound or class of compounds
• CPC Class Codes: Y10S 436/817 Steroids or hormones

Abstract

Methods and apparatus for electronically addressing and interrogating microarrays are disclosed. The described microarrays include a plurality of features disposed on a substrate. Each of the features has a first electrode disposed on the substrate, a second electrode disposed on the substrate, and a probe disposed between the first electrode and second electrode. The substrate also includes addressing circuitry in operable relation to the features. Method of using the microarrays are also described.

Claims

1. A method of detecting a target in a sample, the method comprising:

(a) contacting a microarray with the sample, the microarray comprising a plurality of features disposed on a substrate, each feature comprising a first electrode disposed on the substrate, a second electrode disposed on the substrate, a pad of resistive material disposed on the substrate between the first electrode and the second electrode, said pad of material comprising a material selected from the group consisting of carbon thin film, metal thin film, metal nitride, nichrom (NiCr), tantalum nitride (Ta₂N), silicon chrome, and metal oxide, and a probe supported on the pad of resistive material, the substrate comprising integrated addressing circuitry in operable relation to each of the plurality of features;

(b) applying a source of metal ions to the plurality of features to result in metal deposited between the first electrode and the second electrode of said features where the target is present, said metal providing a change in an observable property of at least one of the plurality of features;

(c) providing a signal to the addressing circuitry to select one of the plurality of features to be interrogated; and

(d) measuring the observable property at the selected feature to detect the target.

2. The method of claim 1 wherein the observable property is selected from the group consisting of resistance, impedance, conductance, capacitance, current, potential, and transmission of a signal between the two electrodes.

3. The method of claim 1, further comprising (g) attaching a label to the target prior to applying the source of metal ions.

4. The method of claim 3, wherein the label comprises a nanoparticle selected from the group consisting of a gold nanoparticle and a silver nanoparticle.

5. The method of claim 4, wherein applying the source of metal ions results in deposition of the metal onto the nanoparticle.

6. The method of claim 3, wherein the label is attached to the target via a conjugate binding pair selected from the group consisting of biotin-avidin and digoxigenin-antidigoxigenin.

7. The method of claim 1, wherein a plurality of targets are detected.

15. The method of claim 1, further comprising:

repeating steps (c) and (d) to selectively interrogate another of the plurality of features; and

analyzing the results obtained from step (d) to detect the target.

8. A microarray comprising a plurality of features disposed on a substrate, each feature comprising a first electrode disposed on the substrate, a second electrode disposed on the substrate, a pad of resistive material disposed on the substrate between the first electrode and the second electrode, and a probe supported on the pad of resistive material, the substrate comprising integrated addressing circuitry in operable relation to the features, the addressing circuitry operable to select a given feature to allow interrogation of the selected feature, and the pad of resistive material comprising a material selected from the group consisting of carbon thin film, metal thin film, metal nitride, nichrom (NiCr), tantalum nitride (Ta₂N), silicon chrome, and metal oxide.

9. The microarray according to claim 8, wherein the pad of resistive material comprises a plurality of segments with fissures between the segments.

10. The microarray according to claim 8, wherein the substrate comprises measurement circuitry in electrical communication with the addressing circuitry, the measurement circuitry being operable to interrogate the given feature selected by the addressing circuitry.

11. The microarray according to claim 8, wherein the substrate comprises integrated circuitry for storage of data in operable relation to the addressing circuitry.

12. The microarray according to claim 8, wherein the probe comprises at least one of the group consisting of polypeptides, polynucleotides, glycoproteins, polysaccharides, hormones, growth factors, peptidoglycans, ribonucleotides, deoxyribonucleotides, modified nucleosides, peptide nucleic acids, and oligomeric nucleoside phosphonates.

13. The microarray of claim 8, wherein each of the plurality of features comprises a different probe.

14. The microarray of claim 8, wherein the microarray comprises at least one reference feature in operable relation to the addressing circuitry.

16. A microarray comprising a plurality of features disposed on a substrate, each feature comprising a first electrode disposed on the substrate, a second electrode disposed on the substrate, a pad of resistive material disposed on the substrate between the first electrode and the second electrode, and a probe supported on the pad of resistive material, the substrate comprising integrated addressing circuitry in operable relation to the features, the addressing circuitry operable to select a given feature to allow interrogation of the selected feature, and the pad of resistive material comprising a plurality of segments with fissures between the segments.

17. The microarray according to claim 16, wherein the pad of resistive material comprises a material selected from the group consisting of carbon thin film, metal thin film, metal nitride, nichrome (NiCr), tantalum nitride (Ta₂N), silicon chrome, and metal oxide.

18. The microarray according to claim 16, wherein the probe comprises at least one of the group consisting of polypeptides, polynucleotides, glycoproteins, polysaccharides, hormones, growth factors, peptidoglycans, ribonucleotides, deoxyribonucleotides, modified nucleosides, peptide nucleic acids, and oligomeric nucleoside phosphonates.

19. The microarray of claim 16, wherein each of the plurality of features comprises a different probe.