Agent detection in the presence of background clutter

• US 7,525,102 B1
• Filed: 10/02/2006
• Issued: 04/28/2009
• Est. Priority Date: 10/03/2005
• Status: Expired due to Fees

• Current Assignee: Parsons Government Services, Inc. (New Port Group Holdings, Inc.)
• Original Assignee: SPARTA, Inc. (New Port Group Holdings, Inc.)
• Inventors: Henshaw, Philip D., Trepagnier, Pierre C.
• Primary Examiner(s): Porta; David P
• Assistant Examiner(s): Gaworecki; Mark R
• Application Number:
  US11/541,935
• Publication Number:
  US 20090101843A1
• Time in Patent Office: 939 Days
• Field of Search: 250/393, 250/458.1, 250/459.1
• US Class Current: 250/393
• CPC Class Codes: G01J 3/28 Investigating the spectrum using colour filters G01J3/51
• CPC Class Codes: G01J 3/44 Raman spectrometry; Scattering spectrometry ; Fluorescence spectrometry
• CPC Class Codes: G01N 2021/6417 Spectrofluorimetric devices
• CPC Class Codes: G01N 2021/6421 Measuring at two or more wavelengths
• CPC Class Codes: G01N 21/6408 with measurement of decay time, time resolved fluorescence
• CPC Class Codes: G01N 2201/129 Using chemometrical methods

Abstract

The present invention generally provides systems and methods for detection of agents of interest in a bulk quantity of matter, which also contains clutter and other constituents that typically interfere with the detection of one or more agents of interest. A detection system of the invention generally contains a collection subsystem for obtaining a bulk sample, an interrogation subsystem for generating one or more analytical signals representative of the composition of the bulk sample, and an analytical subsystem according to the teachings of the invention that implements the methods and algorithms of the invention for analyzing the sample analytical signals to determine whether one or more agents of interest are present, e.g., at quantities above a certain threshold, in the bulk sample.

Claims

1. A method of detecting an agent in a bulk sample including at least one background constituent, comprising:

utilizing a measurement modality to interrogate the sample with electromagnetic radiation so as to generate spectral data corresponding thereto,

deriving principal components of the sample spectral data,

applying a rotate-and-suppress transformation to said principal components of the sample data, wherein said transformation suppresses a contribution of at least one background constituent, if present, and

comparing said transformed principal components of the sample data with background-suppressed principal components of corresponding spectral data of an agent to determine whether said agent is present in the bulk sample.

2. The method of claim 1, further comprising

utilizing said measurement modality to obtain spectral data corresponding to the agent,

deriving principal components of the agent spectral data, and

applying said rotate-and-suppress transformation to said principal components of the agent data to generate said background-suppressed principal components of the agent data.

3. The method of claim 1, wherein the step of deriving principal components of sample spectral data comprises utilizing Principal Component Analysis (PCA).

4. The method of claim 1, wherein said comparing step comprises determining whether a spectral angle between a vector representing the background-suppressed principal components of the sample data and a vector representing the background-suppressed principal components of the agent data lies within a pre-defined range.

5. The method of claim 4, further comprising indicating detection of the agent in the bulk sample when said spectral angle lies within said range.

6. The method of claim 4, further comprising indicating detection of the agent in the bulk sample when said spectral angle lies with said range and a dot product of said vectors exceeds a predefined threshold.

7. The method of claim 1, further comprising:

utilizing said measurement modality to obtain spectral data for at least one background constituent,

deriving principal components of said background spectral data, and

generating said rotate-and-suppress transformation based on said background principal components of the background constituent data.

8. The method of claim 1, wherein said measurement modality comprises any of fluorescence excitation-emission spectroscopy, fluorescence lifetime spectroscopy, laser-induced breakdown spectroscopy, Raman spectroscopy, Terahertz transmission or reflection spectroscopy, and X-ray fluorerscence.

9. The method of claim 1, wherein said sample comprises a bio-aeosol.

10. The method of claim 1, wherein said sample comprises any of a biowarfare agent, a chemical warfare agent, a radiological agent, an explosive agent, or a pollutant agent.

11. The method of claim 1, wherein said radiation comprises ultraviolet radiation and said measurement modality comprises fluorescence spectroscopy.

12. A method of processing spectral data taken from a sample, comprising

utilizing a plurality of measurement modalities to interrogate the sample with electromagnetic radiation so as to generate a plurality of sets of spectral data each corresponding to one of said modalities,

combining the plurality of sets of spectral data into a composite feature vector, and

transforming said composite feature vector into a single principal component vector.

13. The method of claim 12, wherein said combining step further comprises applying a normalization factor to at least one of said spectral data sets.

14. A method of detecting an agent in a bulk sample including at least one background constituent, comprising:

utilizing a plurality of measurement modalities to interrogate the sample with electromagnetic radiation so as to generate a plurality of sets of spectral data each corresponding to one of said modalities,

combining the plurality of sets of spectral data into a composite feature vector,

transforming said feature vector into a principal component vector,

applying a rotate-and-suppress transformation to said principal component vector, wherein said transformation suppresses a contribution of said background constituent, if present, to said vector, and

comparing said transformed principal component vector with a respective background-suppressed agent vector to determine whether said agent is present in the bulk sample.

15. The method of claim 14, wherein said combining step further comprises applying a normalization factor to at least one of said two spectral data sets.

16. The method of claim 14, wherein one of said data sets comprises fluorescence emission-excitation data and the other data set comprises fluorescence lifetime data.

17. The method of claim 16, wherein each fluorescence lifetime datum is normalized utilizing the amplitude of the emission-excitation space at which it was measured.

18. A system for detecting an agent in a bulk sample having at least one background constituent, comprising:

a background library for storing data corresponding to at least one background constituent,

an agent library for storing principal components of measurement data corresponding to said agent,

a preprocessing module in communication with said libraries and adapted to receive measurement data corresponding to a test sample, said module calculating a rotate and suppress transformation and applying said rotate-and-suppress transformation to measurement data corresponding to said test sample so as to generate transformed principal component vectors corresponding to the test sample, wherein said transformation suppresses said background constituent, if present in the test sample, said preprocessing module further applying said transformation to the agent so as to generate background-suppressed principal component vectors corresponding to the agent, and

an agent detection module in communication with said preprocessing module to receive said transformed principal component vectors corresponding to the agent and the sample, said agent detection module comparing said vectors to determine whether said agent is present in the sample.