Process and apparatus for combinatorial synthesis

• US 7,576,037 B2
• Filed: 11/18/2005
• Issued: 08/18/2009
• Est. Priority Date: 11/18/2005
• Status: Expired due to Fees

• Current Assignee: MEI Technologies, Board of Regents of the University of Texas System (University of Texas System)
• Original Assignee: BD of Regents University of Texas, MEI Technologies
• Inventors: Engelhardt, Johnnie Paul, Luxon, Bruce A., Gorenstein, David G.
• Primary Examiner(s): LIU, SUE XU
• Application Number:
  US11/282,800
• Publication Number:
  US 20070117099A1
• Time in Patent Office: 1,369 Days
• Field of Search: 506/34, 506/37, 422/129
• US Class Current: 506/34
• CPC Class Codes: B01J 19/0046 Sequential or parallel reactions, e.g. for the synthesis of polypeptides or polynucleotides; Apparatus and devices for combinatorial chemistry or for making molecular arrays synthesis methods per se C40B50/00
• CPC Class Codes: B01J 2219/00286 Reactor vessels with top and bottom openings
• CPC Class Codes: B01J 2219/00466 in a slurry
• CPC Class Codes: B01J 2219/00497 Features relating to the solid phase supports
• CPC Class Codes: B01J 2219/005 Beads
• CPC Class Codes: B01J 2219/00576 fluorophore
• CPC Class Codes: B01J 2219/00592 Split-and-pool, mix-and-divide processes
• CPC Class Codes: B01J 2219/00596 Solid-phase processes
• CPC Class Codes: B01J 2219/00689 using computers
• CPC Class Codes: B01J 2219/00722 Nucleotides
• CPC Class Codes: B01J 2219/00725 Peptides
• CPC Class Codes: C40B 60/14 for creating libraries

Abstract

Apparatus and methods are described for split synthesis combinatorial chemistry that provides candidate libraries where an even distribution of theoretical products is obtainable through even mixing during the pooling step, followed by controlled redistribution of the mixed pooled products from the prior addition step into separate synthesis columns, one for each different specie of subunit to be added.

Claims

1. A synthesizer for combinatorial chemistry comprising:

a plurality of synthesizer columns adapted to retain solid reaction supports within the columns during a series of reaction steps, each synthesizer column comprising a reagent fluid path selectively controlled by individual inlet and outlet reagent valves disposed on opposite ends of each column, and a mixing fluid path selectively controlled by individual first and second mixing valves disposed on opposite ends of each column;

a common mixing chamber in fluid communication with each of the synthesizer columns when the mixing fluid path is established by flow through the first mixing valves of each synthesizer column, said first mixing valves disposed in-line between each synthesizer column and common mixing chamber;

a pressure controllable fluid reservoir in fluid communication with the mixing fluid path and adapted to provide a motive force to the mixing fluid path to transport a stream of fluidized solid supports into the synthesizer columns for the series of reaction steps as well as out of the synthesizer columns and into a common mixing chamber between reaction steps.

2. The synthesizer of claim 1, further comprising a programmable interface for controlling a sequence of valve and fluid path movement.

3. The synthesizer of claim 1, further comprising a static mixer disposed in fluid communication and in-line between the first mixing valves of each synthesizer column and the common mixing chamber.

4. The synthesizer of claim 1, further comprising a second pressure controllable reservoir in fluid communication with mixing fluid path, wherein the motive force for the mixing fluid path is provided by a combined action of the pressure controllable fluid reservoirs, which are disposed at essentially opposite ends of the mixing fluid path.

5. The synthesizer of claim 4, wherein the mixing fluid path is configured to provide equal fluid volume and pressure to and from each column and the common mixing chamber.

6. The synthesizer of claim 1, wherein the solid reaction supports are fluidized and are retained in each column during reaction steps by at least one fritted aperture.

7. The synthesizer of claim 1, wherein the reagent valves and the mixing valves are solenoid valves.

8. The synthesizer of claim 1, further comprising at least one splitter box disposed in the mixing fluid path.

9. The synthesizer of claim 1, further comprising a pair of splitter boxes, wherein the splitter boxes are disposed in the mixing fluid path between the columns and both of the pressure controllable fluid reservoirs.

10. The synthesizer of claim 1, wherein the mixing chamber is configured by elimination of sharp interior angles to limit trapping of the fluidized solid supports.

11. The synthesizer of claim 10, wherein the mixing chamber is devoid of recesses and interior angles of less than approximately 90°

.

12. The synthesizer of claim 3, wherein the static mixer comprises a conduit intersected by fixed internal elements that create turbulence in a fluid flow conveying the fluidized solid supports through the static mixer.

13. A synthesizer for combinatorial chemistry comprising:

a plurality of synthesizer columns, each column comprising;

a fritted reagent inlet aperture and a non-fritted mixing aperture disposed on a first end of each column,

a fritted outlet aperture on a second end of each column,

a reagent inlet valve in fluid communication with the fritted reagent inlet aperture and a reagent outlet valve in fluid communication with the fritted outlet aperture;

a first mixing valve in fluid communication with the non-fritted mixing aperture and a second mixing valve in fluid communication with the fritted outlet aperture;

a common mixing chamber in selective fluid communication with each synthesizer column, wherein the first mixing valve of each synthesizer column is disposed between the synthesizer column and the common mixing chamber;

a pressure controllable fluid reservoir in fluid communication with the mixing chamber and adapted to control a fluid flow of fluidized solid supports into the synthesizer columns for the series of reaction steps as well as out of the synthesizer columns and into the common mixing chamber between reaction steps.

14. The synthesizer of claim 13, further comprising a programmable interface for controlling a sequence of valve and fluid flow movements.

15. The synthesizer of claim 13, further comprising a second pressure controllable reservoir in fluid communication each synthesizer column, wherein the fluid flow is controlled by a combined action of the pressure controllable fluid reservoirs.

16. The synthesizer of claim 13, wherein the reagent valves and the mixing valves are solenoid valves.

17. The synthesizer of claim 13, further comprising at least one splitter box.

18. The synthesizer of claim 15, further comprising a pair of splitter boxes, wherein the splitter boxes are disposed between the columns and each of the pressure controllable fluid reservoirs.