Universal biosensor and methods of use

• US 7,718,388 B2
• Filed: 11/10/2006
• Issued: 05/18/2010
• Est. Priority Date: 05/31/2002
• Status: Expired due to Fees

• Current Assignee: Cornell Research Foundation Incorporated (Cornell University)
• Original Assignee: Cornell Research Foundation Incorporated (Cornell University)
• Inventors: Baeumner, Antje J.
• Primary Examiner(s): Navarro; Mark
• Assistant Examiner(s): HINES, JANA A
• Application Number:
  US11/595,480
• Publication Number:
  US 20100068696A1
• Time in Patent Office: 1,285 Days
• Field of Search: 435/4, 435/5, 435/6, 435/7.1, 435/7.2, 435/7.4, 435/7.5, 435/7.8, 435/7.9, 435/7.92, 435/7.93, 435/7.94, 435/7.95, 435/39, 435/287.1, 435/287.2, 436/43, 436/44, 436/46, 436/164, 436/169, 436/172, 436/174, 436/501, 436/512, 436/513, 436/518, 436/523, 436/536
• US Class Current: 435/7.95
• CPC Class Codes: B82Y 10/00 Nanotechnology for information processing, storage or transmission, e.g. quantum computing or single electron logic
• CPC Class Codes: B82Y 5/00 Nanobiotechnology or nanomedicine, e.g. protein engineering or drug delivery
• CPC Class Codes: G01N 33/54313 the carrier being characterised by its particulate form
• CPC Class Codes: G01N 33/5438 Electrodes

Abstract

The present invention relates to methods for detecting or quantifying an analyte in a test sample including providing at least one test mixture including a test sample, at least one marker complex, wherein each marker complex includes a particle, a marker, and one member of a coupling group, a first binding material selected to bind to a portion of the analyte, a second binding material selected to bind with a portion of the analyte other than the portion of the analyte for which the first binding material is selected, analyte analog, and/or marker conjugate. The at least one test mixture is passed through a membrane. The amount of marker on the membrane is detected and correlated to the presence or amount of analyte in the test sample.

Claims

1. A method for detecting or quantifying an analyte in a test sample comprising:

providing at least one test mixture comprising;

a test sample, wherein the test sample potentially contains an analyte;

a marker complex, wherein the marker complex comprises a particle, a marker, and a first member of a first coupling group;

a first binding material, wherein the first binding material is selected to bind with a portion of the analyte and wherein the first binding material comprises a second member of the first coupling group; and

a second binding material, wherein the second binding material is selected to bind with a portion of the analyte other than the portion of the analyte for which the first binding material is selected and wherein the second binding material comprises a first member of a second coupling group;

contacting the at least one test mixture with a surface having a second member of the second coupling group immobilized thereto;

permitting reaction to occur between any analyte present and the first and second binding materials, between the first and second members of the first coupling group, and between the first and second members of the second coupling group;

detecting the presence or amount of the marker on the surface using a detection assembly; and

correlating the presence or amount of the marker on the surface with the presence or amount, respectively, of the analyte in the test sample;

wherein the first and second members of the first coupling group and the first and second members of the second coupling group are capable of recognizing a particular spatial and polar organization of the other member of its respective coupling group.

2. The method according to claim 1, wherein contacting comprises contacting a single mixture including the test sample, the marker complex, the first binding material, and the second binding material.

3. The method according to claim 1, wherein said contacting comprises contacting two or more mixtures each including one or more of the test sample, the marker complex, the first binding material, and the second binding material.

4. The method according to claim 3, wherein the two or more mixtures are passed sequentially.

5. The method according to claim 4, wherein a test mixture comprising the second binding material is contacted with the surface under conditions effective to permit reaction between the first and second members of the second coupling group and subsequently a test mixture comprising the test sample, the marker complex, and the first binding material is contacted with the surface.

6. The method according to claim 3, wherein the two or more mixtures are contacted substantially simultaneously.

7. The method according to claim 1, wherein reaction between any analyte present and the first and second binding materials and reaction between the first and second members of the first coupling group occurs in the at least one test mixture prior to contacting the at least one test mixture with the surface.

8. The method according to claim 1, wherein reaction between any analyte present and the first and second binding materials and reaction between the first and second members of the first coupling group occurs on the surface.

9. The method according to claim 1, wherein the surface comprises a contact portion on a first absorbent material and a capture portion either on said first absorbent material, or on a second absorbent material in fluid flow contact with said first absorbent material, and wherein the second member of the second coupling group is bound to the capture portion.

10. The method according to claim 9, wherein contacting comprises allowing the test mixture to migrate from the contact portion to the capture portion.

11. The method according to claim 1, wherein the surface comprises a filtration membrane.

12. The method according to claim 1, wherein each of said first and second binding materials is an antibody, an antigen, a nucleic acid sequence, an aptamer, or a cell receptor.

13. The method according to claim 1, wherein said first and second coupling groups are selected from the group consisting of antibody-antigen, receptor-ligand, biotin-streptavidin, sugar-lectins, and complementary oligonucleotides.

14. The method according to claim 1, wherein said analyte is a target nucleic acid molecule, said first binding material is a reporter probe selected to hybridize with a portion of said target nucleic acid molecule, and said second binding material is a capture probe selected to hybridize with a portion of said target nucleic acid molecule other than the portion of said target nucleic acid molecule for which said reporter probe is selected.

15. The method according to claim 14, wherein said target nucleic acid molecule is found in an organism selected from the group consisting of bacteria, fungi, viruses, protozoa, parasites, animals, and plants.

16. The method according to claim 1, wherein said particle is selected from the group consisting of liposomes, latex beads, gold particles, silica particles, dendrimers, quantum dots, and magnetic beads.

17. The method according to claim 16, wherein said particle is a liposome, said marker is encapsulated in said liposome, and said method further comprises lysing said liposome following said contacting and before said detecting.

18. The method according to claim 1, wherein said marker comprises an electroactive marker.

19. The method according to claim 18, wherein said electroactive marker is a reversible redox couple.

20. The method according to claim 18, wherein said detection assembly is an electrochemical detection assembly.

21. The method according to claim 20, wherein said electrochemical detection assembly comprises an electrode array comprising a first conductor having a plurality of fingers and a second conductor having a plurality of fingers, wherein said fingers of said first conductor are interdigitated with said fingers of said second conductor, said first and second conductors are electrically connected to one another via a voltage source and readout device, and said array is positioned to induce redox cycling of the electroactive marker.

22. The method according to claim 1, wherein said marker comprises an optical marker.

23. The method according to claim 22, wherein said detection assembly is an optical detection assembly.