Handling kit for analyzing a liquid sample by nucleic acid amplification

• US 8,062,884 B2
• Filed: 07/05/2007
• Issued: 11/22/2011
• Est. Priority Date: 07/14/2006
• Status: Expired due to Fees

• Current Assignee: Roche Molecular Systems (Roche Holding AG)
• Original Assignee: Roche Molecular Systems Inc (Roche Holding AG)
• Inventors: Sarofim, Emad
• Primary Examiner(s): Bowers; Nathan
• Assistant Examiner(s): Prakash; Gautam
• Application Number:
  US12/373,518
• Publication Number:
  US 20090317899A1
• Time in Patent Office: 1,601 Days
• Field of Search: 422/58, 436/164, 435/7.1, 435/287.3, 435/288.1, 435/288.3, 435/288.4, 435/288.5
• US Class Current: 435/288.5
• CPC Class Codes: B01L 2200/027 for microfluidic devices
• CPC Class Codes: B01L 2200/0684 Venting, avoiding backpressure, avoid gas bubbles
• CPC Class Codes: B01L 2300/044 pierceable, e.g. films, membranes
• CPC Class Codes: B01L 2300/0681 Filter
• CPC Class Codes: B01L 2300/0809 rectangular shaped
• CPC Class Codes: B01L 2300/087 Multiple sequential chambers
• CPC Class Codes: B01L 2400/0487 fluid pressure, pneumatics
• CPC Class Codes: B01L 3/0275 Interchangeable or disposable dispensing tips
• CPC Class Codes: B01L 3/502715 characterised by interfacing components, e.g. fluidic, electrical, optical or mechanical interfaces
• CPC Class Codes: B01L 3/502723 characterised by venting arrangements
• CPC Class Codes: B01L 7/52 with provision for submitting samples to a predetermined sequence of different temperatures, e.g. for treating nucleic acid samples amplification or hybridisation processes per se C12Q1/68; controlling sequential reactions for synthesis B01J19/0046

Abstract

The invention refers to a handling kit for analyzing a liquid sample, especially by nucleic acid amplification, comprising a disposable sample holding and processing device (1) dimensioned for use in an apparatus for analyzing a liquid sample, and a sample transfer tip (12) for transferring liquid into the disposable device (1), the disposable device (1) having a sample preparation chamber (10) which has an outlet (9) and an insertion opening (16) which is adapted to receive the sample transfer tip (12), the insertion opening and the sample transfer tip (12) being dimensioned in such a way that inserting the sample transfer tip (12) into an insertion position in the sample preparation chamber (10) causes a tight seal between an outer wall (40) of the sample transfer tip (12) and an inner wall (41) of the sample preparation chamber (10), the disposable device (1) having a vent (31) for venting the sample preparation chamber (10).

Claims

1. A handling kit for analyzing a liquid sample by nucleic acid amplification comprising:

a disposable device adapted for holding and processing a sample for being used in an apparatus for analyzing a liquid sample, and

a sample transfer tip for transferring liquid into the disposable device,

wherein the disposable device has a sample preparation chamber which has an outlet and an insertion opening which is adapted to receive the sample transfer tip, the outlet being configured to be closed during sample preparation,

the insertion opening of the sample preparation chamber and the sample transfer tip being dimensioned in such a way that inserting the sample transfer tip into an insertion position in the sample preparation chamber causes a seal between an outer wall of the sample transfer tip and an inner wall of the sample preparation chamber,

such that the seal between the sample transfer tip and the inner wall of the of the sample preparation chamber prevents contamination of the sample and allows mixing of the liquid sample with reagents in the sample preparation chamber,

the disposable device having a vent for venting the sample preparation chamber, wherein the vent is different from the outlet,

the disposable device having a first channel which leads from the sample preparation chamber to the vent, the first channel comprising a first fluid control area comprising a closing apparatus configured to close the first channel and thereby control the flow of gases or liquids, and

the disposable device having a second channel which leads from the outlet to a fluidic system, the second channel comprising a second fluid control area comprising a second closing apparatus configured to close the second channel and thereby control the flow of gases or liquids.

2. The handling kit according to claim 1, wherein the sample transfer tip has an end adapted for being introduced into the sample preparation chamber in such a way that the end is distanced from the insertion opening by at least about 1 cm after introduction.

3. The handling kit according to claim 1, wherein the sample transfer tip has an end adapted for being introduced into the sample preparation chamber in such a way that the end is distanced from the insertion opening after introduction by a distance which is at least about 30% of the total length of the sample transfer tip.

4. The handling kit according to claim 1, wherein the outer wall of the sample transfer tip forms the seal with a section of the inner wall of the sample preparation chamber which is distanced from the insertion opening of the sample preparation chamber.

5. The handling kit according to claim 1, wherein the sample transfer tip and the disposable device are adapted and dimensioned in such a way that the sample transfer tip is friction locked in an insertion position in the sample preparation chamber.

6. The handling kit according to claim 1, wherein the outer diameter of the sample transfer tip is in the range of about 5 mm to about 20 mm.

7. The handling kit according to claim 1, wherein the sample preparation chamber has a volume of about 50 μ

l to about 20 ml.

8. The handling kit according to claim 1, wherein the vent is provided with means for blocking passage of liquid or solid particles.

9. The handling kit according to claim 8, wherein the means for blocking passage of liquid or solid particles comprises a filter material which is placed in the vent.

10. The handling kit according to claim 1, wherein the sample transfer tip comprises a plug which filters aerosols from air which the device exchanges with a surrounding atmosphere, is made of a filter material, and prevents contamination and is permeable for air to communicate pressure and therefore allowing sample aspiration and dosing as well as sip and spit mixing of sample liquid with reagents in the sample preparation chamber.

11. The handling kit according to claim 10, wherein the disposable device comprises a device body and a cover which covers a structured surface of the disposable device body thereby forming a wall of the channel and of the chambers.

12. The handling kit according to claim 1, wherein the sample preparation chamber is connected by a channel to a fluid interface port for adding reagents into the sample preparation chamber.

13. The handling kit according to claim 1, wherein the disposable device comprises a system of channels and chambers which is connected to the outlet of the sample preparation chamber.

14. The handling kit according to claim 13, wherein an adsorber for binding nucleic acids is placed in the system of channels and chambers.

15. The handling kit according to claim 1, wherein:

the sample transfer tip has an end adapted for being introduced into the sample preparation chamber in such a way that the end is distanced from the insertion opening by at least about 5 cm after introduction,

the sample transfer tip has an end adapted for being introduced into the sample preparation chamber in such a way that the end is distanced from the insertion opening after introduction by a distance which is at least about 75% of the total length of the sample transfer tip,

the outer wall of the sample transfer tip forms the seal with a section of the inner wall of the sample preparation chamber which is distanced from the insertion opening of the sample preparation chamber by about 2 mm to about 10 mm,

the sample transfer tip and the disposable device are adapted and dimensioned in such a way that the friction lock between the sample transfer tip in the insertion position and the disposable device creates a locking force of at least about 5 N,

the inner wall of the sample preparation chamber has a sealing area which engages a sealing area of a section of the outer wall of the sample transfer tip to form the seal after introduction of the transfer tip into the sample preparation chamber,

the sample transfer tip reaches with the major part of its length into the sample preparation chamber,

the distance between the end of the sample transfer tip and the sealing area is larger than the immersion depth with which the sample transfer tip is immersed in a sample liquid during a sample collection process when sample is taken from a sample reservoir,

the outer diameter of the sample transfer tip is in the range of about 5 mm to about 20 mm, and

the sample preparation chamber has a volume of about 200 μ

l to about 10 ml.