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Variant database

  • US 8,812,422 B2
  • Filed: 11/02/2012
  • Issued: 08/19/2014
  • Est. Priority Date: 04/09/2012
  • Status: Active Grant
First Claim
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1. A method of providing a description of a variant in a patient'"'"'s genome, the method comprising:

  • receiving genetic data relating to the patient, the data representing at least a first mutation and a second mutation;

    retrieving from one or more computer-readable storage devices a first variant object comprising a description of the first mutation as a first variant of a reference and a second variant object comprising a description of the second mutation as a second variant of the reference, each of the first and second variant objects being an instance of an abstract class of a genomic feature;

    determining a relationship between the first and second mutations;

    retrieving a third object comprising a description of the relationship, the third object also being an instance of the abstract class; and

    providing a description of the variant based on the third object, wherein each object inherits a start position attribute from the abstract class.

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