Production of isobutanol in yeast mitochondria

• US 8,828,694 B2
• Filed: 11/12/2009
• Issued: 09/09/2014
• Est. Priority Date: 11/13/2008
• Status: Active Grant

• Current Assignee: Gevo Incorporated
• Original Assignee: Butamax(TM) Advanced Biofuels LLC (BP PLC)
• Inventors: Anthony, Larry Cameron, Huang, Lixuan Lisa, Ye, Rick W.
• Primary Examiner(s): Monshipouri, Maryam
• Application Number:
  US12/617,017
• Publication Number:
  US 20100129886A1
• Time in Patent Office: 1,762 Days
• Field of Search: 435/157, 435/160, 435/252.3, 435/254.11
• US Class Current: 435/160
• CPC Class Codes: C12N 15/8273 for drought, cold, salt resistance
• CPC Class Codes: C12N 9/1205 Phosphotransferases with an alcohol group as acceptor (2.7.1), e.g. protein kinases
• CPC Class Codes: C12N 9/88 Lyases (4.)
• CPC Class Codes: C12P 7/16 Butanols
• CPC Class Codes: Y02E 50/10 Biofuels, e.g. bio-diesel

Abstract

Yeast cells with modified expression of certain enzyme activities in the mitochondria are described for isobutanol production. Modifications described provide an isobutanol biosynthesis pathway in the yeast mitochondria.

Claims

1. A recombinant yeast cell comprising a heterologous gene encoding a mitochondrial localized polypeptide having α

-keto acid decarboxylase activity and wherein the mitochondria is substantially devoid of a functional polypeptide having threonine deaminase activity and a functional polypeptide having isopropylmalate synthase activity.

2. The yeast cell of claim 1 wherein the cell produces isobutanol in the mitochondria.

3. The yeast cell of claim 2 wherein the cell further comprises genes encoding mitochondrial localized polypeptides having ketol-acid reductoisomerase activity and dihydroxy-acid dehydratase activity which are overexpressed.

4. The yeast cell of claim 3 wherein the mitochondria is further substantially devoid of a functional polypeptide having an enzyme activity selected from branched chain amino acid transaminase activity, pyruvate dehydrogenase activity, or a combination thereof.

5. The yeast cell of claim 1 selected from the group consisting of Saccharomyces, Schizosaccharomyces, Hansenula, Candida, Kluyveromyces, Yarrowia and Pichia.

6. The yeast cell of claim 1 wherein the α

-keto acid decarboxylase activity is defined by the enzyme classification number EC 4.1.1.72.

7. The yeast cell of claim 4 wherein:

a) the threonine deaminase activity is defined by the enzyme classification number EC 4.3.1.19;

b) the isopropylmalate synthase activity is defined by the enzyme classification number EC 2.3.3.13;

c) the branched chain amino acid transaminase activity is defined by the enzyme classification number EC 2.6.1.42; and

d) the pyruvate dehydrogenase activity is defined by the enzyme classification number EC 1.2.4.1.

8. The yeast cell of claim 4 wherein the polypeptide having the pyruvate dehydrogenase activity is a multienzyme complex comprising proteins selected from the group consisting of:

PDA1, PDA1, PDB1, LAT1, LPD1, and PDX1.

9. A method for making isobutanol comprising growing the yeast host cell of any of claim 3, and 4 under conditions whereby isobutanol is produced.