Methods for the production and secretion of modified peptides

• US 8,835,616 B2
• Filed: 12/07/2005
• Issued: 09/16/2014
• Est. Priority Date: 12/07/2004
• Status: Expired due to Fees

• Current Assignee: LanthioPep BV (Morphosys Ag)
• Original Assignee: LanthioPep BV (Morphosys Ag)
• Inventors: Moll, Gert Nikolaas, Kuipers, Anneke, Rink, Rick, Driessen, Arnold Jacob Mathieu, Kuipers, Oscar Paul
• Primary Examiner(s): KIM, ALEXANDER D
• Application Number:
  US11/792,516
• Publication Number:
  US 20090042246A1
• Time in Patent Office: 3,205 Days
• Field of Search: None
• US Class Current: 536/23.4
• CPC Class Codes: C12N 15/625 containing a sequence coding for a signal sequence

Abstract

The invention relates to the production of heterologous polypeptides in a recombinant host cell. More specifically, it relates to the production and secretion of peptides, such as biologically active peptides, that are modified by one or more lantibiotic-synthesizing enzymes. Provided is a nucleic acid construct encoding a polypeptide comprising 1) a non-lantibiotic export signal that is recognized by a non-lantibiotic export system; 2) a lantibiotic leader peptide that is recognized by at least a lantibiotic dehydratase such as LanB and, C-terminally of said export signal and said leader peptide, 3) a peptide of interest containing one or more serine or threonine residue(s) which can be posttranslationally dehydrated by said dehydratase. Also provided is a method for producing a polypeptide in a host cell, comprising providing a host cell with a nucleic acid construct according to the invention and allowing expression and secretion of the encoded polypeptide by said host cell, wherein said host cell comprises at least a dehydratase capable of modifying said encoded polypeptide and a non-lantibiotic export system capable of secreting said modified polypeptide.

Claims

1. A nucleic acid encoding a synthetic polypeptide, the polypeptide comprising:

a first, non-lantibiotic export signal peptide that is SEQ ID NO;

46 or a signal for the secretory (Sec) system from Lactococcus lactis;

a second, lantibiotic leader peptide that is recognized by a lantibiotic dehydratase selected from the group consisting of lantibiotic dehydratase (LanB) and lantibiotic bifunctional enzyme (LanM) dehydratase; and

a third peptide of interest comprising at least one serine or threonine residue that can be posttranslationally dehydrated by LanB, wherein the peptide of interest is positioned C-terminally of both the non-lantibiotic export signal peptide and the lantibiotic leader peptide.

2. The nucleic acid of claim 1, wherein the peptide of interest further comprises at least one cysteine residue that can be coupled enzymatically or chemically to a dehydrated serine or threonine residue.

3. The nucleic acid of claim 2, wherein the cysteine residue is located no more than 30 amino acid residues from the serine or threonine residue in the peptide of interest.

4. The nucleic acid of claim 1, wherein the lantibiotic leader peptide is SEQ ID NO:

53 or SEQ ID NO;

54.

5. The nucleic acid of claim 1, wherein the lantibiotic leader peptide is from a lantibiotic selected from the group consisting of nisin A, nisin Z, subtilin, ericin S, ericin A, streptin, epidermin, val1-leu6-epidermin, gallidermin, mutacin 1140, mutacin B-Ny266, mutacin III, mutacin I, pep5, epilancin K7, epicidin 280, lacticin 481, variacin, mutacin II, streptococcin A-FF22, salivaricin A, lactocin S, cypemycin, plantaricin C, actagardine, Ala(0)-actagardine, lacticin 3147A1, lacticin 3147A2, staphylococcin C55α

, staphylococcin C55b, plantaricin Wa, plantaricin Wb, cytolysin Ll, cytolysin Ls, ruminococcin A, carnocin U149, macedocin, bovicin HJ50, nukacin ISK 1 butyrivibriocin OR79A, cinnamycin, duramycin, ancovenin, mersacidin, and sapB.

6. The nucleic acid of claim 1, wherein the non-lantibiotic export signal peptide is located N-terminally from the lantibiotic leader peptide.

7. The nucleic acid of claim 1, wherein the non-lantibiotic export signal and the lantibiotic leader peptide are separated by between 2 and 250 amino acids.

8. The nucleic acid of claim 1, wherein the peptide of interest is selected from the group consisting of a bioactive peptide, a hormone, an enzyme, an inhibitory protein, a therapeutic protein, a lantibiotic protein, a viral protein and a mutant of any thereof.

9. The nucleic acid of claim 1, wherein the non-lantibiotic export signal peptide is located C-terminally from the lantibiotic leader peptide.

10. The nucleic acid of claim 1, wherein the non-lantibiotic export signal peptide is SEQ ID NO:

46.

11. A host cell transformed with the nucleic acid of claim 1.

12. The host cell of claim 11, wherein the host cell is selected from the group consisting of a prokaryote, a eukaryote, a Gram-positive prokaryote, a Lactococcus spp. and a Bacillus spp.

13. A method for secreting a synthetic polypeptide from a host cell, the method comprising:

providing the host cell of claim 11;

expressing the nucleic acid encoding the synthetic polypeptide in the host cell, to produce the synthetic polypeptide in the host cell; and

secreting the synthetic polypeptide from the host cell, wherein the host cell comprises the lantibiotic dehydratase and the non-lantibiotic export system.

14. The method according to claim 13, wherein the host cell further comprises a lantibiotic cyclase so as to allow production of a thioether-ring in the peptide of interest in the host cell.

15. A nucleic acid encoding a synthetic polypeptide, the polypeptide comprising:

a first peptide consisting of SEQ ID NO;

46;

a second, lantibiotic leader peptide; and

a third peptide of interest comprising at least one serine or threonine residue that can be posttranslationally dehydrated by dehydratase, wherein the peptide of interest is positioned C-terminally of both SEQ ID NO;

46 and the lantibiotic leader peptide.

16. The nucleic acid of claim 15, wherein the lantibiotic leader peptide consists of the sequence of SEQ ID NO:

53 or the sequence of SEQ ID NO;

54.

17. A nucleic acid molecule encoding a synthetic polypeptide, the nucleic acid molecule comprising:

a first nucleotide sequence encoding a peptide selected from the group consisting of;

an export signal peptide of a secretory (Sec) system,

an export signal peptide of a Twin-Arginine Translocation (TAT) system, and

an export signal peptide of a non-lantibiotic ATP Binding Cassette (ABC) export system;

a second nucleotide sequence encoding a peptide selected from the group consisting of SEQ ID NO;

53 and SEQ ID NO;

54; and

a third nucleotide sequence encoding a peptide of interest comprising a serine or threonine residue that can be posttranslationally dehydrated by dehydratase, wherein the third nucleotide sequence is positioned 3′

of both the first and second nucleotide sequence in the nucleic acid construct.

18. The nucleic acid molecule of claim 17, wherein the first nucleotide sequence encodes the polypeptide of SEQ ID NO:

46.

19. A nucleic acid encoding a polypeptide that is synthetic, the polypeptide comprising:

a first, export signal peptide that is SEQ ID NO;

46 or an export signal peptide for the secretory (Sec) system from Lactococcus lactis;

a second, leader peptide selected from the group consisting of SEQ ID NO;

53 and SEQ ID NO;

54; and

a third, peptide of interest comprising at least one serine or threonine residue that can be posttranslationally dehydrated by dehydratase, wherein the peptide of interest is positioned C-terminally of both the export signal peptide and the leader peptide.

20. The nucleic acid of claim 19, wherein the serine or threonine residue can be post-translationally dehydrated by lantibiotic dehydratase (LanB) or lantibiotic bifunctional enzyme (LanM) dehydratase, and wherein the peptide of interest further comprises at least one cysteine residue that can be coupled enzymatically or chemically to a dehydrated serine or threonine residue.

21. The nucleic acid of claim 19, wherein the second peptide is from a lantibiotic selected from the group consisting of nisin A, nisin Z, subtilin, ericin S, ericin A, streptin, epidermin, val1-leu6-epidermin, gallidermin, mutacin 1140, mutacin B-Ny266, mutacin III, mutacin I, pep5, epilancin K7, epicidin 280, lacticin 481, variacin, mutacin II, streptococcin A-FF22, salivaricin A, lactocin S, cypemycin, plantaricin C, actagardine, Ala(0)-actagardine, lacticin 3147A1, lacticin 3147A2, staphylococcin C55α

, staphylococcin C55b, plantaricin Wa, plantaricin Wb, cytolysin Ll, cytolysin Ls, ruminococcin A, carnocin U149, macedocin, bovicin HJ50, nukacin ISK-1, butyrivibriocin OR79A, cinnamycin, duramycin, ancovenin, mersacidin, and sapB.

22. The nucleic acid of claim 19, wherein the first and the second peptides are separated by between 2 and 250 amino acids.