Methods for controlling pests using RNAi

• US 8,933,042 B2
• Filed: 09/18/2006
• Issued: 01/13/2015
• Est. Priority Date: 09/16/2005
• Status: Expired due to Fees

• Current Assignee: deVGen NV (China National Chemical Corporation)
• Original Assignee: deVGen NV (China National Chemical Corporation)
• Inventors: Raemaekers, Romaan, Feldmann, Pascale, Plaetinck, Geert, Nooren, Irene, Van Bleu, Els, Pecqueur, Frederic, Kubler, Laurent, Damme, Nicole, Degrave, Lies, Remory, Isabel
• Primary Examiner(s): SHIN, DANA H
• Application Number:
  US11/992,091
• Publication Number:
  US 20090306189A1
• Time in Patent Office: 3,039 Days
• Field of Search: 435/6, 435/91.1, 435/91.31, 514/44, 536/23.1, 536/24.5, 536/24.3
• US Class Current: 514/44.A
• CPC Class Codes: A01N 63/60 Isolated nucleic acids
• CPC Class Codes: A61P 31/04 Antibacterial agents
• CPC Class Codes: C12N 15/113 Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing when used in plants C12N15/8218
• CPC Class Codes: C12N 15/8286 for insect resistance
• CPC Class Codes: C12N 2310/14 interfering N.A.
• CPC Class Codes: Y02A 40/146 Genetically Modified [GMO] plants, e.g. transgenic plants

Abstract

The present invention relates to methods for controlling pest infestation using double stranded RNA molecules. The invention provides methods for producing transgenic cells expressing the double stranded RNA molecules, as well as compositions and commodity products containing or treated with such molecules.

Claims

1. A method for controlling insect infestation, comprising exposing an insect to a composition comprising a double stranded ribonucleotide that inhibits the expression of an mRNA transcribed from a polynucleotide sequence selected from the group consisting of

(i) a polynucleotide sequence comprising the nucleic acid sequence set forth in SEQ ID NO:

11;

(ii) a polynucleotide sequence comprising a nucleic acid sequence having at least 70% sequence identity over a comparison window of at least 100 nucleotides as determined by the BLASTN alignment tool to the nucleic acid sequence set forth in SEQ ID NO;

11; and

(iii) a polynucleotide sequence comprising a fragment of at least 21 nucleotides of SEQ ID NO;

11, and

wherein the double stranded RNA is produced by a bacterium or yeast cell engineered to produce the double stranded RNA from a DNA construct comprising annealed complementary strands, one of which has a polynucleotide selected from any of (i)-(iii), or

wherein the double stranded RNA is in vitro transcribed from a DNA construct comprising annealed complementary strands, one of which has a polynucleotide sequence selected from the any of (i)-(iii).

5. The method of claim 1, 2 or 4, wherein said polynucleotide sequence is an ortholog of Drosophila melanogaster gene CG1250.

6. The method of claim 1, 2, or 4, wherein said nucleic acid sequence has at least 80% sequence identity over a comparison window of at least 100 nucleotides as determined by the BLASTN alignment tool to the nucleic acid sequence set forth in SEQ ID NO:

11.

7. The method of claim 1, 2, or 4, wherein said nucleic acid sequence has at least 90% sequence identity over a comparison window of at least 100 nucleotides as determined by the BLASTN alignment tool to the nucleic acid sequence set forth in SEQ ID NO:

11.

2. A method for protecting an object from insect infestation, comprising treating the surface of said object with a composition comprising a double stranded ribonucleotide that inhibits the expression of an mRNA transcribed from a polynucleotide sequence selected from the group consisting of

(i) a polynucleotide sequence comprising the nucleic acid sequence set forth in SEQ ID NO:

11;

(ii) a polynucleotide sequence comprising a nucleic acid sequence having at least 70% sequence identity over a comparison window of at least 100 nucleotides as determined by the BLASTN alignment tool to the nucleic acid sequence set forth in SEQ ID NO;

11; and

(iii) a polynucleotide sequence comprising a fragment of at least 21 contiguous nucleotides of SEQ ID NO;

11, and

wherein the double stranded RNA is produced by a bacterium or yeast cell engineered to produce the double stranded RNA from a DNA construct comprising annealed complementary strands, one of which has a polynucleotide selected from any of (i)-(iii), or

wherein the double stranded RNA is in vitro transcribed from a DNA construct comprising annealed complementary strands, one of which has a polynucleotide sequence selected from the any of (i)-(iii).

3. The method of claim 2, wherein said object is selected from the group consisting of wood, tree, book binding, cloth, and a food storage container.

4. A method for reducing or treating an insect infestation comprising administering a composition comprising a double stranded ribonucleotide that inhibits the expression of an mRNA transcribed from a polynucleotide sequence selected from the group consisting of

(i) a polynucleotide sequence comprising the nucleic acid sequence set forth in SEQ ID NO:

11;

(ii) a polynucleotide sequence comprising a nucleic acid sequence having at least 70% sequence identity over a comparison window of at least 100 nucleotides as determined by the BLASTN alignment tool to the nucleic acid sequence set forth in SEQ ID NO;

11; and

(iii) a polynucleotide sequence comprising a fragment of at least 21 contiguous nucleotides of SEQ ID NO;

11, and

wherein the double stranded RNA is produced by a bacterium or yeast cell engineered to produce the double stranded RNA from a DNA construct comprising annealed complementary strands, one of which has a polynucleotide selected from any of (i)-(iii), or

wherein the double stranded RNA is in vitro transcribed from a DNA construct comprising annealed complementary strands, one of which has a polynucleotide sequence selected from the any of (i)-(iii).