Method of fluorescent measurement of samples, and devices therefrom

• US 9,523,640 B2
• Filed: 02/24/2011
• Issued: 12/20/2016
• Est. Priority Date: 11/03/2010
• Status: Active Grant

• Current Assignee: ReaMetrix, Inc.
• Original Assignee: ReaMetrix, Inc.
• Inventors: Manian, Bala S.
• Primary Examiner(s): Porta, David
• Assistant Examiner(s): GUTIERREZ, GISSELLE M
• Application Number:
  US13/034,302
• Publication Number:
  US 20120104280A1
• Time in Patent Office: 2,126 Days
• Field of Search: 250/458.1, 250/459.1
• US Class Current: 1/1
• CPC Class Codes: G01N 21/6428 Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" in vivo A61B5/00; immunoassay G01N33/53
• CPC Class Codes: G01N 21/6452 Individual samples arranged in a regular 2D-array, e.g. multiwell plates
• CPC Class Codes: G02B 21/0076 arrangements using fluorescence or luminescence

Abstract

The invention provides a method and device for fluorescent measurement of a volume of liquid sample in a sample carrier. The method includes impinging an incident beam having an excitation wavelength and a focus diameter on the sample in a two dimensional scan, such as an R-theta scan or a spiral scan, with a laser spot that identifies a volume of interest where higher levels of fluorescence exist. The laser spot is displaced relative to the sample volume in three dimensional space. The laser spot is translated in the depth direction of the volume of interest to detect one or more emitted fluorescence signals. A depth profile and a thickness of the sample carrier obtained from the one or more emitted fluorescence signals, are used for measuring normalized bulk fluorescence. Further, at least one microvolume of interest is obtained from the depth profile, and the incident beam is focused on the microvolume of interest to obtain at least one concentrated emitted fluorescence signal that is representative of the bulk concentration of fluorescence of a fluorphore.

Claims

1. A method for measuring fluorescence comprising:

providing a liquid sample having a volume contained in a sample carrier, wherein the sample volume contains at least one fluorophore amidst bulk fluorescence of the sample;

providing a laser light source to generate a scanning spot of a single wavelength having an excitation wavelength and a focus diameter to impinge on the sample volume for measuring fluorescence; and

displacing the laser spot of said single wavelength, relative to the sample volume, with a two dimensional preview scan, by moving the sample carrier and the incident beam relative to each other in an R-theta scan at a first resolution to detect in a three-dimensional space, defined by the sample volume, at least one individual volume of interest where fluorescence exceeds bulk fluorescence in other regions of the sample carrier wherein the at least one volume of interest and the laser spot have a defined relationship, then

measuring a depth profile of fluorescence in the at least one individual volume of interest at a second resolution higher than the first resolution as a profile of the at least one fluorophore therein amidst the bulk fluorescence,

wherein a two dimensional R-theta scan of the sample at a single wavelength establishs three dimensional fluorescence profiles of the at least one fluorophore in the sample amidst the bulk fluorescence.

2. The method of claim 1 further defined by obtaining the thickness of the sample carrier, wherein the depth profile and the thickness are used for measuring normalized bulk fluorescence.

3. The method of claim 1 further comprising:

determining at least one microvolume of interest from the depth profile; and

focusing the incident beam on the microvolume of interest to obtain at least one concentrated emitted fluorescence signal.

4. The method of claim 3, wherein the at least one concentrated emitted fluorescence signal is used to measure one or more event fluorescences for the sample.

5. The method of claim 3, wherein the one or more emitted fluorescence signals and the at least one concentrated emitted fluorescence signal are split into two or more spectral bands.

6. The method of claim 3, wherein the one or more emitted fluorescence signals and the at least one concentrated emitted fluorescence signal are split into a first spectral band, a second spectral band and a third spectral bands.

7. The method of claim 6, wherein the first spectral band ranges from about 650 nm to about 690 nm, the second spectral band ranges from about 690 nm to about 740 nm, and the third spectral band ranges from about 740 nm to about 800 nm.

8. The method of claim 1, wherein the excitation wavelength ranges from about 300 nanometers to 1200 nanometers.

9. The method of claim 8, wherein the excitation wavelength ranges from about 600 nanometers to 650 nanometers.

10. The method of claim 9, wherein the excitation wavelength is about 640 nanometers.

11. The method of claim 3 further comprising:

measuring a normalized bulk fluorescence using the depth profile and the thickness of the sample carrier; and

measuring one or more event fluorescences for the sample using the at least one concentrated emitted fluorescence signal.

12. The method of claim 1, wherein the at least one individual volume of interest and the spot created by the incident beam have a defined relationship in the R-theta scan.

13. The method of claim 1, wherein the moving in the R-theta scan is in a linear trajectory and an arcuate trajectory combined.

14. The method of claim 3, wherein the excitation wavelength ranges from about 300 nanometers to 1200 nanometers.

15. The method of claim 3, wherein the excitation wavelength ranges from about 600 nanometers to 850 nanometers.

16. The method of claim 15, wherein the excitation wavelength is about 640 nanometers.

17. A fluorescence measuring device comprising:

a sample assembly for receiving a sample carrier that comprises a sample, wherein the sample comprises at least one fluorophore amidst background bulk fluorescence;

a laser light source for generating an incident beam having a single excitation wavelength and a focus diameter to impinge on the sample to yield a spot for measuring fluorescence;

a means for displacing the spot in a two dimensional low resolution scan relative to the sample volume in a three dimensional space by moving the sample carrier and the incident beam relative to each other in an R-theta scan, the three dimensional space including mostly bulk fluorescence; and

a means for detecting at least one individual volume of interest in the two-dimensional low resolution scan that has the at least one fluorophore amidst background bulk fluorescence therin, wherein the at least one individual volume of interest and the laser spot have a defined relationship, then displacing the spot in a high resolution scan to measure the depth profile of fluorescence in the volume of interest as a profile of the least one fluorophore in background bulk fluorescence,

wherein a two-dimensional scan of the sample establishes three dimensional fluorescence profiles of the at least one fluorophore amidst the background bulk fluorescence.

18. The device of claim 17 further comprising a processor module for obtaining a depth profile and a thickness of the sample carrier from the one or more emitted fluorescence signals, wherein the depth profile is in the at least one individual volume of interest.

19. The device of claim 18, wherein the processor module uses the depth profile and the thickness for measuring normalized bulk fluorescence.

20. The device of claim 18, wherein the processor module is configured to determine at least one microvolume of interest from the depth profile.

21. The device of claim 20 further comprising a controller module to trigger the light source to focus the incident beam on the microvolume of interest to obtain at least one concentrated emitted fluorescence signal.

22. The device of claim 17, wherein the at least one individual volume of interest and the spot have a defined relationship.

23. The device of claim 21, further comprising a detector assembly to detect the one or more emitted fluorescence signals and the at least one concentrated emitted fluorescence signal.

24. The device of claim 23, wherein the detector assembly further comprises two or more beam splitters for splitting the one or more emitted fluorescence signals and the at least one concentrated emitted fluorescence signal into two or more spectral bands.

25. The device of claim 24, wherein the detector assembly further comprises three beam splitters for splitting the one or more emitted fluorescence signals and the at least one concentrated emitted fluorescence signal into a first spectral band, a second spectral band and a third spectral bands respectively.

26. The device of claim 25, wherein the first spectral band ranges from about 650 nm to about 690 nm, the second spectral band ranges from about 690 nm to about 740 nm, and the third spectral band ranges from about 740 nm to about 800 nm.

27. The device of claim 24 wherein the detector assembly comprises two or more detectors, each detector configured to receive a respective portion of the one or more emitted fluorescence signals and the at least one concentrated emitted fluorescence signal from the two or more beam splitters.

28. The device of claim 27 wherein the processor module is configured for receiving data representative of each respective portion of the one or more emitted fluorescence signals and the at least one concentrated emitted fluorescence signal from the two or more detectors, and for measuring one or more fluorescence events for the individual volume of interest and normalized bulk fluorescence for the sample, based on the data.

29. The device of claim 17 further comprising a graphical user interface to display a plurality of menu options, to receive inputs from an operator and to display results for the sample.

30. The device of claim 23, wherein the controller module is coupled to the sample assembly, the light source and the detector assembly, wherein the controller module is configured to issue instructions for operation of the sample assembly, the light source and the detector assembly based on a selected menu option.

31. The device of claim 17, wherein the excitation wavelength ranges from about 300 nanometers to 1200 nanometers.

32. The device of claim 31, wherein the excitation wavelength ranges from about 600 nanometers to 800 nanometers.

33. The device of claim 32, wherein the excitation wavelength is about 640 nanometers.

34. A method for analyzing a sample comprising:

scanning a liquid sample volume with a beam spot of a single wavelength over an area of the sample volume for analysis by moving a sample carrier and the beam spot relative to each other in an R-theta scan, wherein the sample volume contains at least one fluorophore amidst bulk fluorescence of the sample defining a volume of interest, wherein the volume of interest and the beam spot have a defined relationship;

acquiring simultaneous fluorescent signal from fluorophores in the liquid sample volume, representing of one or more fluorescence events for the volume of interest where a depthwise fluorescent profile is measured using the spot and signal representing a normalized bulk fluorescence for the sample volume; and

using the simultaneous signals to distinguish fluorescent signals from fluorophores from bulk fluorescence signals in the liquid volume.

35. The method of claim 34 wherein the fluorophore is associated with an analyte in the sample.

36. The method of claim 34 wherein the fluorophore is associated with a disease condition.

37. The method of claim 36 wherein the disease condition comprises at least one of an onset, a progression, a regression, stable, an advanced condition.