Compositions and methods for controlling leptinotarsa

• US 9,777,288 B2
• Filed: 07/18/2014
• Issued: 10/03/2017
• Est. Priority Date: 07/19/2013
• Status: Active Grant

• Current Assignee: Monsanto Technology LLC (Bayer AG)
• Original Assignee: Monsanto Technology LLC (Bayer AG)
• Inventors: Beattie, Jodi Lynn, Crawford, Michael John, Eads, Brian Donovan, Flagel, Lex Evan, Kapoor, Mahak, Taylor, Christina Marie
• Primary Examiner(s): Ibrahim, Medina A
• Assistant Examiner(s): Zhong, Wayne
• Application Number:
  US14/335,135
• Publication Number:
  US 20150143580A1
• Time in Patent Office: 1,173 Days
• Field of Search: None
• CPC Class Codes: C07K 14/43563 from insects
• CPC Class Codes: C12N 15/113 Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing when used in plants C12N15/8218
• CPC Class Codes: C12N 15/8218 Antisense, co-suppression, viral induced gene silencing [VIGS], post-transcriptional induced gene silencing [PTGS]
• CPC Class Codes: C12N 15/8286 for insect resistance
• CPC Class Codes: C12N 2310/14 interfering N.A.
• CPC Class Codes: Y02A 40/146 Genetically Modified [GMO] plants, e.g. transgenic plants

Abstract

Disclosed herein are methods of controlling insect pests, in particular Leptinotarsa spp. which infest crop plants, and methods of providing plants resistant to such pests. Also disclosed are polynucleotides and recombinant DNA molecules and constructs useful in such methods, insecticidal compositions such as topical sprays containing insecticidal double-stranded RNAs, and solanaceous plants with improved resistance to infestation by Leptinotarsa spp. Further disclosed are methods of selecting target genes for RNAi-mediated silencing and control of Leptinotarsa spp.

Claims

1. A method for controlling a Leptinotarsa species infestation of a plant comprising:

(a) contacting said Leptinotarsa species with a double-stranded RNA (dsRNA) comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105;

or

(b) providing in the diet of said Leptinotarsa species a dsRNA comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105;

or

(c) causing mortality or stunting in larvae of said Leptinotarsa species by providing in the diet of said larvae at least one dsRNA comprising at least one silencing element comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105;

or

(d) topically applying to said plant a composition comprising at least one dsRNA comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, wherein said at least one dsRNA is provided in a manner that permits a Leptinotarsa species feeding on said plant to ingest said at least one dsRNA;

or

(e) expressing in said plant at least one dsRNA comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, or complementary to a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, wherein said at least one dsRNA is ingested by a Leptinotarsa species feeding on said plant;

or

(f) providing to said plant at least one dsRNA comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, or complementary to a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, wherein said at least one dsRNA is ingested by a Leptinotarsa species feeding on said plant;

or

(g) contacting said Leptinotarsa species with a dsRNA comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, or complementary to a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105.

2. The method of claim 1, wherein said double-stranded RNA is chemically synthesized or is produced by expression in a microorganism or by expression in a plant cell.

3. The method of claim 1, wherein said double-stranded RNA comprises a strand comprising the sequence selected from the group consisting of:

SEQ ID NOs;

989, 988, 1103, 1104, and 1105.

4. The method of claim 1, wherein said method comprises topically applying to said plant a composition comprising at least one dsRNA comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of:

SEQ ID NOs;

989, 988, 1103, 1104, and 1105; and

wherein said composition further comprises one or more components selected from the group consisting of a carrier agent, a surfactant, a cationic lipid, an organosilicone, an organosilicone surfactant, a polynucleotide herbicidal molecule, a nonpolynucleotide herbicidal molecule, a non-polynucleotide pesticide, a safener, and an insect growth regulator.

5. The method of claim 1, wherein said method comprises contacting said Leptinotarsa species with an effective amount of a solution comprising a double-stranded RNA, wherein at least one strand of the double-stranded RNA comprises at least 98% identity to a sequence selected from the group consisting of:

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, wherein said Leptinotarsa species is Leptinotarsa decemlineata, and wherein RNA interference is induced and Leptinotarsa decemlineata mortality occurs.

6. The method of claim 5, wherein said solution further comprises one or more components selected from the group consisting of an organosilicone surfactant or a cationic lipid.

7. The method of claim 1, wherein said method comprises topically applying to said plant a composition comprising at least one dsRNA comprising a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of:

SEQ ID NOs;

989, 988, 1103, 1104, and 1105; and

wherein said Leptinotarsa species is Leptinotarsa decemlineata.

8. The method of claim 1, wherein said Leptinotarsa species is selected from the group consisting of:

Leptinotarsa behrensi, Leptinotarsa collinsi, Leptinotarsa decemlineata (Colorado potato beetle), Leptinotarsa defecta, Leptinotarsa haldemani (Haldeman'"'"'s green potato beetle), Leptinotarsa heydeni, Leptinotarsa juncta (false potato beetle), Leptinotarsa lineolata (burrobrush leaf beetle), Leptinotarsa peninsularis, Leptinotarsa rubiginosa, Leptinotarsa texana, Leptinotarsa tlascalana, Leptinotarsa tumamoca, and Leptinotarsa typographica.

9. A plant having improved resistance to a Leptinotarsa species infestation, provided by the method of claim 1, or a fruit, seed, or propagatable part of said plant, wherein the fruit, seed or propagatable part comprises the dsRNA.

10. The plant of claim 9, wherein said plant is selected from the group consisting of potato, tomato, and eggplant.

11. An insecticidal composition for controlling a Leptinotarsa species;

comprising;

(a) at least one dsRNA consisting of two strands, wherein a first strand comprises a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104; and

1105, wherein said at least one dsRNA causes mortality or stunting of growth in said Leptinotarsa species when ingested or contacted by said Leptinotarsa species;

or

(b) at least one dsRNA consisting of at least one silencing element that comprises a strand comprising a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, wherein said at least one dsRNA causes mortality or stunting of growth in said Leptinotarsa species when ingested or contacted by said Leptinotarsa species;

or

(c) at least one dsRNA consisting of two strands, wherein a first strand comprises a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, or complementary to a sequence having at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, wherein said at least one dsRNA causes mortality or stunting of growth in said Leptinotarsa species when ingested or contacted by said Leptinotarsa species;

or

(d) a dsRNA molecule that causes mortality or stunting of growth in a Leptinotarsa species when ingested or contacted by said Leptinotarsa species, wherein said dsRNA molecule consists of two strands, wherein a first strand is at least 98% identical to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105;

or

(e) an insecticidal double-stranded RNA molecule that causes mortality or stunting of growth in a Leptinotarsa species when ingested or contacted by said Leptinotarsa species, wherein at least one strand of said insecticidal double-stranded RNA molecule consists of a sequence comprising at least 98% identity to a sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105;

or

(f) at least one double-stranded RNA consisting of two strands wherein the sequence of a first strand is selected from the group consisting of;

SEQ ID NOs;

989;

988, 1103, 1104, and 1105, wherein said at least one double-stranded RNA causes mortality or stunting of growth in said Leptinotarsa species when ingested or contacted by said Leptinotarsa species.

12. The insecticidal composition of claim 11, wherein said insecticidal composition is in the form of at least one selected from the group consisting of a solid, liquid, powder, suspension, emulsion, spray, encapsulation, microbeads, carrier particulates, film, matrix, seed treatment, soil drench, implantable formulation, and in-furrow formulation.

13. The insecticidal composition of claim 11, further comprising at least one component selected from the group consisting of a carrier agent, a surfactant, a cationic lipid, an organosilicone, an organosilicone surfactant, a polynucleotide herbicidal molecule, a non-polynucleotide herbicidal molecule, a nonpolynucleotide pesticide, a safener, and an insect growth regulator.

14. A recombinant DNA construct comprising a heterologous promoter operably linked to:

(a) DNA encoding an RNA comprising at least 98% identity to a nucleotide sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, or the complement thereof;

or

(b) DNA encoding an RNA comprising at least one double-stranded RNA region, at least one strand of which comprises at least 98% identity to the nucleotide sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, or the complement thereof;

or

(c) DNA encoding an RNA comprising the nucleotide sequence selected from the group consisting of;

SEQ ID NOs;

989, 988, 1103, 1104, and 1105, or the complement thereof.

15. A plant chromosome or a plastid or a recombinant plant virus vector or a recombinant baculovirus vector comprising the recombinant DNA construct of claim 14.

16. A transgenic solanaceous plant cell having in its genome the recombinant DNA construct of claim 14.

17. The transgenic solanaceous plant cell of claim 16, wherein said transgenic solanaceous plant cell further has in its genome DNA encoding at least one pesticidal agent selected from the group consisting of a patatin, a plant lectin, a phytoecdysteroid, a Bacillus thuringiensis insecticidal protein, a Xenorhabdus insecticidal protein, a Photorhabdus insecticidal protein, a Bacillus laterosporous insecticidal protein, and a Bacillus sphaericus insecticidal protein.

18. A transgenic solanaceous plant comprising the transgenic solanaceous plant cell of claim 16, or a fruit, seed, or propagatable part of said transgenic solanaceous plant, wherein the fruit, seed or propagatable part comprises the dsRNA.