Cloned genes encoding reverse transcriptase lacking RNase H activity
DCFirst Claim
1. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during cDNA synthesis by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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Abstract
The invention relates to a gene which encodes reverse transcriptase having DNA polymerase activity and substantially no RNase H activity. The invention also relates to vectors containing the gene and hosts transformed with the vectors of the invention. The invention also relates to a method of producing reverse transcriptase having DNA polymerase activity and substantially no RNase H activity by expressing the reverse transcriptase genes of the present invention in a host. The invention also relates to a method of producing cDNA from mRNA using the reverse transcriptase of the invention. The invention also relates to a kit for the preparation of cDNA from mRNA comprising the reverse transcriptase of the invention.
51 Citations
195 Claims
- 1. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during cDNA synthesis by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
- 14. The reverse transcriptase of claim 14, wherein said no detectable RNase H activity is determined by examining the integrity of an mRNA template during DNA synthesis.
- 17. The reverse transcriptase of claim 17, wherein said lack of RNase H activity is determined by examining the integrity of an mRNA template during cDNA synthesis.
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25. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a one minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
- 26. The reverse transcriptase of claim 26, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to amino acids 498-611 of M-MLV reverse transcriptase.
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28. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 5 minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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29. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 10 minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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30. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 30 minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified with the RNase H domain.
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31. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 60 minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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32. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a one minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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33. The reverse transcriptase of claim 33, wherein said DNA polymerase activity is at least 17.5×
- 103 units/mg.
- View Dependent Claims (34, 35, 36)
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37. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 5 minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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38. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 10 minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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39. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 30 minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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40. A retroviral reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 60 minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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41. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during cDNA synthesis by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
- 42. The reverse transcriptase of claim 42, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to amino acids 498-611 of M-MLV reverse transcriptase.
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47. The reverse transcriptase of claim 47, wherein said reverse transcriptase is greater than 90% pure.
- 49. The reverse transcriptase of claim 49, wherein said reverse transcriptase is isolated using column chromatography.
- 54. The reverse transcriptase of claim 54, wherein said no detectable RNase H activity is determined by examining the integrity of an mRNA template during cDNA synthesis.
- 57. The reverse transcriptase of claim 57, wherein said lack of RNase H activity is determined by examining the integrity of an mRNA template during cDNA synthesis.
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65. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a one minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
- 66. The reverse transcriptase of claim 66, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to amino acids 498-611 of M-MLV reverse transcriptase.
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68. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 5minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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69. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 10 minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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70. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 30 minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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71. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 60 minute cDNA synthesis reaction by said reverse transcriptase and wherein said reverse transcriptase is modified within the RNase H domain.
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72. AN M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a one minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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73. The reverse transcriptase of claim 73, wherein said DNA polymerase activity is at least 17.5×
- 103 units/mg.
- View Dependent Claims (74, 75, 76)
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77. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 5minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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78. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 10 minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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79. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 30 minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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80. An M-MLV reverse transcriptase having DNA polymerase activity, wherein said reverse transcriptase allows an mRNA template to remain intact during a 60 minute cDNA synthesis reaction by said reverse transcriptase as determined by gel electrophoresis and wherein said reverse transcriptase is modified within the RNase H domain.
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81. A retroviral reverse transcriptase having DNA polymerase activity and no detectable RNase H activity, wherein said reverse transcriptase is modified within the RNase H domain.
- 82. The reverse transcriptase of claim 82, wherein said reverse transcriptase is selected from the group consisting of M-MLV, HTLV-1, BLV, RSV, and HIV reverse transcriptase.
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95. The reverse transcriptase of claim 95, wherein said DNA polymerase activity is at least 17.5×
- 103 units/mg.
- View Dependent Claims (96)
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103. An M-MLV reverse transcriptase having DNA polymerase activity and no detectable RNase H activity, wherein said reverse transcriptase is modified within the RNase H domain.
- 104. The reverse transcriptase of claim 104, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to amino acids 498-611 of M-MLV reverse transcriptase.
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118. The reverse transcriptase of claim 118, wherein said DNA polymerase activity is at least 17.5×
- 103 units/mg.
- View Dependent Claims (119)
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124. A retroviral reverse transcriptase having DNA polymerase activity and 0.23×
- 103 units/mg or less of RNase H activity, wherein said reverse transcriptase is modified within the RNase H domain.
- 125. The reverse transcriptase of claim 125, wherein said reverse transcriptase is selected from the group consisting of M-MLV, HTLV-1, BLV, RSV and HIV reverse transcriptase.
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134. An M-MLV reverse transcriptase having DNA polymerase activity and 0.23×
- 103 units/mg or less of RNase H activity, wherein said reverse transcriptase is modified within the RNase H domain.
- 135. The reverse transcriptase of claim 135, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to amino acids 498-611 of M-MLV reverse transcriptase.
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142. An M-MLV reverse transcriptase having DNA polymerase activity of at least 17.5×
- 103 units/mg and 0.23×
103 units/mg or less of RNase H activity, wherein said reverse transcriptase is modified within the RNase H domain.
- 103 units/mg and 0.23×
- 143. The reverse transcriptase of claim 143, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to amino acids 498-611 of M-MLV reverse transcriptase.
- 151. A vector comprising the DNA molecule of claim 151.
- 153. The host cell of claim 153, wherein said host cell is E. coli.
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155. The host cell of claim 155, wherein said host cell is E. coli.
- 157. The method of claim 157, further comprising incubating said first DNA molecule under conditions sufficient to make a second DNA molecule complementary to said first DNA molecule.
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158. The method of claim 158, wherein said first and second DNA molecule form a double stranded DNA molecule.
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163. The kit of claim 163, said kit further comprising one or more additional containers selected from the group consisting of:
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a container containing one or more nucleoside triphosphates;
a container containing an oligo(dT) primer; and
a container containing a buffer suitable for use in making cDNA.
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165. The composition of claim 165, wherein said composition further comprises at least one component selected from the group consisting of one or more nucleoside triphosphates, an oligo(dT) primer, a buffer and an mRNA template.
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166. A composition comprising a retroviral reverse transcriptase, wherein said composition has DNA polymerase activity and 0.23×
- 103 units/mg or less of RNase H activity and wherein said reverse transcriptase is modified within the RNase H domain.
- 167. The composition of claim 167, wherein said reverse transcriptase is selected from the group consisting of M-MLV, HTLV-1, BLV, RSV and HIV reverse transcriptase.
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177. A composition comprising an M-MLV reverse transcriptase, wherein said composition has DNA polymerase activity and 0.23×
- 103 units/mg or less of RNase H activity and wherein said reverse transcriptase is modified within the RNase H domain.
- 178. The composition of claim 178, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to 498-611 of M-MLV reverse transcriptase.
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187. A composition comprising an M-MLV reverse transcriptase, wherein said composition has DNA polymerase activity of at least 17.5×
- 103 units/mg and 0.23×
103 units/mg or less of RNase H activity and wherein said reverse transcriptase is modified within the RNase H domain.
- 103 units/mg and 0.23×
- 188. The composition of claim 188, wherein said reverse transcriptase is encoded by a modified nucleotide sequence that encodes a modified amino acid sequence modified in the region corresponding to amino acids 498-611 of M-MLV reverse transcriptase.
Specification