Genetically modified rat comprising a cytokine gene disruption and exhibiting a greater susceptibility to a cytokine-mediated autoimmune and/or inflammatory disease

• US 8,558,055 B2
• Filed: 07/23/2010
• Issued: 10/15/2013
• Est. Priority Date: 07/24/2009
• Status: Active Grant

• Current Assignee: Transposagen Biopharmaceuticals Inc.
• Original Assignee: Transposagen Biopharmaceuticals Inc.
• Inventors: Ostertag, Eric M., Crawford, John Stuart
• Primary Examiner(s): Crouch, Deborah
• Application Number:
  US12/842,418
• Publication Number:
  US 20110023142A1
• Time in Patent Office: 1,180 Days
• Field of Search: None
• US Class Current: 800/13
• CPC Class Codes: A01K 2217/075 inducing loss of function, i.e. knock out
• CPC Class Codes: A01K 2227/105 Murine
• CPC Class Codes: A01K 2267/0325 Animal model for autoimmune diseases
• CPC Class Codes: A01K 2267/0368 Animal model for inflammation
• CPC Class Codes: A01K 67/0276 Knock-out vertebrates
• CPC Class Codes: C12N 15/8509 for producing genetically modified animals, e.g. transgenic

Abstract

The present invention relates to the engineering of animal cells, preferably mammalian, more preferably rat, that are deficient due to the disruption of gene(s) or gene product(s) resulting in cytokine-cytokine mediated autoimmune and inflammatory disease. In another aspect, the invention relates to genetically modified rats, as well as the descendants and ancestors of such animals, which are animal models of human autoimmune and inflammatory disease and methods of their use. Specifically, the invention pertains to a genetically altered rat, or a rat cell in culture, that is defective in at least one of two alleles of a cytokine gene such as the Faslg gene, the Fas gene, etc. In one embodiment, the cytokine gene is the Faslg gene. In another embodiment, the cytokine gene is one of several known cytokine genes, such as Fas, IFNγ, TNF-α, IL-2, IL-10, and IL-12. The inactivation of at least one of these cytokine alleles results in an animal with a higher susceptibility to cytokine-cytokine mediated autoimmune and inflammatory disease induction. In one embodiment, the genetically altered animal is a rat of this type and is able to serve as a useful model for cytokine-cytokine mediated autoimmune and inflammatory disease and as a test animal for autoimmune and other studies.

Claims

1. A genetically modified rat or progeny of the rat, wherein the rat or its progeny comprise in at least some of its cells a genome comprising a disruption of one or more cytokine genes that results in the misexpression of the one or more cytokine genes, wherein the rat or its progeny exhibits a greater susceptibility to a cytokine-mediated autoimmune and/or inflammatory disease than a rat or progeny rat not comprising the genetic mutation.

2. The genetically modified rat of claim 1, wherein the one or more cytokine genes are conditionally misexpressed.

3. The rat of claim 2, wherein the misexpression results in decreased expression of one or more cytokine genes.

4. The genetically modified rat of claim 1, wherein the cytokine gene is selected from the group consisting of Faslg, Fas, IFN-γ

, TNF-α

, IL-2, IL-10, IL-12, Cxcr2(118rb), Ccr4, Ccr9, Cx3crl, Vegf, Prkdc and Ada.

5. The genetically modified rat of claim 1, wherein the cytokine gene is selected from the group consisting of Faslg and Fas.

6. The genetically modified rat of claim 1, wherein the cells are somatic cells.

7. The genetically modified rat of claim 6, wherein the cells are hepatocytes.

8. The genetically modified rat of claim 1, wherein the cytokine gene is disrupted by removal of DNA encoding all or part of the cytokine protein, transposon insertion mutation, insertion mutation, deletion mutation, or introduction of a cassette or gene trap by recombination.

9. The genetically modified rat of claim 1, wherein the rat is homozygous for the one or more disrupted genes or loci.

10. The genetically modified rat of claim 1, wherein the rat is heterozygous for the one or more disrupted genes or loci.

11. A genetically modified rat or progeny of the rat, wherein the rat or its progeny comprise in at least some of its cells a genome comprising a disruption of one or more cytokine genes that results in the rat or its progeny exhibiting a greater susceptibility to a cytokine-mediated autoimmune and/or inflammatory disease than a rat or progeny rat not comprising the genetic mutation.

12. The genetically modified rat of claim 11, wherein the disruption causes a complete loss-of-function phenotype.

13. The genetically modified rat of claim 11, wherein the disruption causes a partial loss-of-function phenotype.

14. The genetically modified rat of claim 11, wherein the disruption causes a phenotype selected from the group consisting of lymphocyte proliferation, macrophage and immunoglobulin dysfunction, native DNA autoantibody production, contact sensitivity deficiency, and chronic inflammation.

15. The genetically modified rat of claim 11, wherein the protein product of the cytokine gene is associated with a phenotype that is characterized as cytokine-mediated autoimmune and/or inflammatory disease.

16. The genetically modified rat of claim 11, wherein the cytokine gene is selected from the group consisting of Faslg, Fas, IFN-γ

, TNF-α

, IL-2, IL-10, IL-12, Cxcr2(118rb), Ccr4, Ccr9, Cx3crl, Vegf, Prkdc and Ada.

17. The genetically modified rat of claim 11, wherein the cytokine gene is selected from the group consisting of Faslg and Fas.

18. The genetically modified rat of claim 11, wherein the one or more cytokine genes or loci are disrupted by transposon insertion mutations.

19. The genetically modified rat of claim 11, wherein the one or more cytokine genes or loci are disrupted by deletion mutation.

20. The genetically modified rat of claim 11, wherein the one or more cytokine genes or loci are disrupted by the introduction of a cassette or gene trap by recombination.

21. The genetically modified rat of claim 11, wherein the rat is homozygous for the one or more disrupted genes or loci.

22. The genetically modified rat of claim 11, wherein the rat is heterozygous for the one or more disrupted genes or loci.

23. The genetically modified rat of claim 11, wherein the phenotype results from a diminished amount, relative to the wild-type phenotype, of a protein selected from the group consisting of Faslg and Fas.

24. A method for determining whether a compound is potentially useful for treating or alleviating the symptoms of a cytokine gene disorder comprising

(a) providing an isolated genetically modified rat cell comprising a genome comprising a disruption of one or more cytokine genes that causes the one or more cytokine genes to be misexpressed, wherein the rat exhibits a greater susceptibility to a cytokine-mediated autoimmune and/or inflammatory disease than a rat not comprising the genetic mutation,

(b) contacting the cell with a compound, and

(c) monitoring the activity of the cytokine protein, such that a change in activity in response to the compound indicates that the compound is potentially useful for treating or alleviating the symptoms of a cytokine gene disorder.

25. The method of claim 24, wherein the method is used for testing for activity of a candidate cytokine modulating agent.

47. The method of claim 24, wherein the candidate cytokine modulating agent modulates T-lymphocyte-mediated apoptosis or native DNA autoantibody production.

26. A screening method for identifying useful compounds, comprising

(a) providing an assay system comprising a rat model system comprising a genetically modified rat or progeny of the rat, wherein the rat or its progeny comprise in at least some of its cells a genome comprising a disruption of one or more cytokine genes that results in the misexpression of the one or more cytokine genes, wherein the rat or its progeny exhibits a greater susceptibility to a cytokine-mediated autoimmune and/or inflammatory disease than a rat or progeny rat not comprising the genetic mutation;

(b) contacting the model system with a candidate test agent; and

(c) detecting a phenotypic change in the model system that indicates that the cytokine function is restored when compared relative to wild-type cells.

27. The screening method of claim 26, wherein the method is used for testing for activity of a candidate cytokine modulating agent.

28. The screening method of claim 26, wherein the candidate cytokine modulating agent modulates T-lymphocyte-mediated apoptosis or native DNA autoantibody production.

29. The screening method of claim 26, wherein the cytokine modulating agent causes altered cytokine gene expression that results in a detectable phenotype.

30. The screening method of claim 26, wherein the phenotype is selected from the group consisting of altered levels of T-, B-, and Natural Killer (NK)-cells, impaired macrophage and immunoglobulin function, and increases in susceptibility to autoimmune diseases, as compared to control animals having normal cytokine gene expression.

31. The screening method of claim 26, wherein the method is used for identifying useful compounds for the treatment of a disease or condition selected from the group consisting of autoimmune and inflammatory disease.

32. The screening method of claim 26, wherein the method is used for immunological studies, toxicology studies, and infectious disease studies.

33. The screening method of claim 30, wherein the cytokine gene is selected from the group consisting of Faslg, Fas, IFN-γ

, TNF-α

, IL-2, IL-10, IL-12, Cxcr2(118rb), Ccr4, Ccr9, Cx3crl, Vegf, Prkdc and Ada.

34. The screening method of claim 30, wherein the cytokine gene is selected from the group consisting of Faslg and Fas.

35. The screening method of claim 30, wherein the one or more cytokine genes or loci are disrupted by removal of DNA encoding all or part of the cytokine protein.

36. The screening method of claim 30, wherein the one or more cytokine genes or loci are disrupted by transposon insertion mutations.

37. The screening method of claim 30, wherein the one or more cytokine genes or loci are disrupted by deletion mutation.

38. The screening method of claim 30, wherein the one or more cytokine genes or loci are disrupted by the introduction of a cassette or gene trap by recombination.

46. The screening method of claim 26, wherein the one or more cytokine genes are selected from Faslg, Fas, IFN-γ

, TNF-α

, IL-2, Prkdc, IL-10, IL-12α and

Ada.

39. A screening method for identifying useful compounds, comprising

(a) providing an assay system comprising a model system comprising a genetically modified rat at least some of whose cells comprise a genome comprising a disruption of one or more cytokine genes that causes the one or more cytokine genes to be misexpressed, wherein the rat exhibits a greater susceptibility to a cytokine-mediated autoimmune and/or inflammatory disease than a rat not comprising the genetic mutation;

(b) contacting the model system with a candidate test agent; and

(c) detecting a change in cytokine polypeptide expression or activity between the presence and absence of the candidate test agent that indicates the presence of a candidate modulating agent.

40. The screening method of claim 39, wherein the candidate cytokine modulating agent causes altered cytokine gene expression that results in a detectable phenotype.

41. The screening method of claim 39, wherein the phenotype is selected from the group consisting of altered levels of T-, B-, and natural Killer (NK)-cells, impaired macrophage and immunoglobulin function, and increases in susceptibility to autoimmune diseases, as compared to control animals having normal cytokine gene expression.

42. The screening method of claim 39, wherein the method is used for identifying useful compounds for the treatment of a disease or condition selected from the group consisting of autoimmune and inflammatory disease.

43. The screening method of claim 39, wherein the method is used for immunological studies, toxicology studies, and infectious disease studies.

44. The screening method of claim 40, wherein the cytokine gene is selected from the group consisting of Faslg, Fas, IFN-γ

, TNF-α

, IL-2, IL-10, IL-12, Cxcr2(118rb), Ccr4, Ccr9, Cx3crl, Vegf, Prkdc and Ada.

45. The screening method of claim 40, wherein the cytokine gene is selected from the group consisting of Faslg and Fas.